| | gene | name | fitness | t score | description | |
|---|
| b0630 | lipB | -3.1 | -3.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4375 | prfC | -2.9 | -10.4 | peptide chain release factor 3 (NCBI) | compare |
| b2699 | recA | -2.7 | -4.1 | recombinase A (NCBI) | compare |
| b2330 | yfcB | -2.5 | -4.4 | putative adenine-specific methylase (VIMSS) | compare |
| b0118 | acnB | -2.5 | -4.9 | aconitate hydratase (NCBI) | compare |
| b2620 | smpB | -2.4 | -3.0 | SsrA-binding protein (NCBI) | compare |
| b3725 | pstB | -2.3 | -4.4 | phosphate transporter subunit (NCBI) | compare |
| b3619 | rfaD | -2.3 | -5.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2935 | tktA | -2.3 | -4.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2567 | rnc | -2.2 | -2.9 | ribonuclease III (NCBI) | compare |
| b3162 | deaD | -2.2 | -8.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0200 | gmhB | -2.1 | -2.8 | hypothetical protein (NCBI) | compare |
| b2528 | iscA | -2.1 | -3.2 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3390 | aroK | -2.0 | -3.3 | shikimate kinase I (NCBI) | compare |
| b3621 | rfaC | -2.0 | -7.0 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2688 | gshA | -2.0 | -9.2 | glutamate--cysteine ligase (NCBI) | compare |
| b0726 | sucA | -1.8 | -5.2 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3052 | rfaE | -1.8 | -6.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1291 | sapD | -1.8 | -3.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1192 | ldcA | -1.7 | -6.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b2287 | nuoB | -1.7 | -5.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2822 | recC | -1.7 | -6.4 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0149 | mrcB | -1.7 | -11.7 | penicillin-binding protein 1b (NCBI) | compare |
| b0439 | lon | -1.7 | -6.4 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0053 | surA | -1.7 | -6.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b4239 | treC | -1.6 | -6.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b4177 | purA | -1.6 | -5.1 | adenylosuccinate synthetase (NCBI) | compare |
| b0222 | lpcA | -1.6 | -3.6 | phosphoheptose isomerase (NCBI) | compare |
| b2820 | recB | -1.6 | -3.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3807 | cyaY | -1.6 | -5.9 | frataxin-like protein (NCBI) | compare |
| b0683 | fur | -1.6 | -2.6 | ferric uptake regulator (NCBI) | compare |
| b2948 | yqgE | -1.6 | -3.9 | orf, hypothetical protein (VIMSS) | compare |
| b3609 | secB | -1.6 | -3.5 | export protein SecB (NCBI) | compare |
| b0890 | ftsK | -1.5 | -8.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2277 | nuoM | -1.5 | -7.3 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0723 | sdhA | -1.5 | -9.8 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1863 | ruvC | -1.5 | -4.4 | Holliday junction resolvase (NCBI) | compare |
| b3463 | ftsE | -1.5 | -5.2 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0721 | sdhC | -1.5 | -5.2 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3290 | trkA | -1.5 | -4.2 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2947 | gshB | -1.5 | -5.6 | glutathione synthetase (NCBI) | compare |
| b3871 | bipA | -1.5 | -9.8 | GTP-binding protein (NCBI) | compare |
| b0722 | sdhD | -1.5 | -4.6 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2279 | nuoK | -1.5 | -2.8 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0720 | gltA | -1.4 | -5.5 | citrate synthase (NCBI) | compare |
| b2576 | srmB | -1.4 | -4.4 | ATP-dependent RNA helicase (NCBI) | compare |
| b1292 | sapC | -1.4 | -3.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3493 | pitA | -1.4 | -8.6 | phosphate transporter, low-affinity (NCBI) | compare |
| b1850 | eda | -1.4 | -1.7 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b4172 | hfq | -1.4 | -2.5 | RNA-binding protein Hfq (NCBI) | compare |
| b3728 | pstS | -1.4 | -5.3 | phosphate transporter subunit (NCBI) | compare |
| b0356 | frmA | -1.3 | -6.8 | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) | conserved |
| b0428 | cyoE | -1.3 | -5.9 | protoheme IX farnesyltransferase (NCBI) | compare |
| b3462 | ftsX | -1.3 | -6.1 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2280 | nuoJ | -1.3 | -5.9 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2297 | pta | -1.3 | -2.3 | phosphate acetyltransferase (NCBI) | compare |
| b2276 | nuoN | -1.3 | -6.2 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3778 | rep | -1.3 | -8.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2278 | nuoL | -1.3 | -8.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2281 | nuoI | -1.3 | -3.2 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0729 | sucD | -1.3 | -3.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b0114 | aceE | -1.2 | -2.9 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b1105 | ycfM | -1.2 | -4.0 | predicted outer membrane lipoprotein (NCBI) | compare |
| b2283 | nuoG | -1.2 | -7.2 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1693 | aroD | -1.2 | -5.8 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3426 | glpD | -1.2 | -6.4 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b1236 | galU | -1.2 | -5.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0767 | ybhE | -1.2 | -4.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b3164 | pnp | -1.2 | -3.3 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4155 | yjeA | -1.2 | -1.8 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3706 | trmE | -1.2 | -6.0 | tRNA modification GTPase (NCBI) | compare |
| b1290 | sapF | -1.2 | -2.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3169 | nusA | -1.2 | -2.8 | transcription elongation factor NusA (NCBI) | compare |
| b3870 | glnA | -1.2 | -3.1 | glutamine synthetase (NCBI) | compare |
| b0724 | sdhB | -1.1 | -4.7 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3389 | aroB | -1.1 | -8.3 | 3-dehydroquinate synthase (NCBI) | compare |
| b3806 | cyaA | -1.1 | -5.3 | adenylate cyclase (NCBI) | compare |
| b3414 | gntY | -1.1 | -5.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b2288 | nuoA | -1.1 | -3.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0082 | mraW | -1.1 | -3.8 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3341 | rpsG | -1.1 | -1.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b2830 | nudH | -1.1 | -1.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3631 | rfaG | -1.1 | -9.2 | glucosyltransferase I (NCBI) | compare |
| b2282 | nuoH | -1.1 | -3.2 | NADH dehydrogenase subunit H (NCBI) | compare |
| b3281 | aroE | -1.1 | -8.8 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3839 | tatC | -1.1 | -6.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3146 | yraL | -1.0 | -4.9 | predicted methyltransferase (NCBI) | compare |
| b2051 | wcaH | -1.0 | -1.4 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2894 | xerD | -1.0 | -1.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2286 | nuoC | -1.0 | -4.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3630 | rfaP | -1.0 | -7.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3620 | rfaF | -1.0 | -4.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3026 | qseC | -1.0 | -4.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2892 | recJ | -1.0 | -5.5 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b3741 | gidA | -1.0 | -5.9 | glucose-inhibited division protein A (NCBI) | compare |
| b3727 | pstC | -1.0 | -5.4 | phosphate transporter subunit (NCBI) | compare |
| b3386 | rpe | -0.9 | -1.4 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b4648 | ysaC | -0.9 | -2.8 | no description | compare |
| b1426 | ydcH | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2284 | nuoF | -0.9 | -3.9 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0741 | pal | -0.9 | -3.2 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2318 | truA | -0.9 | -3.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1476 | fdnI | -0.9 | -1.8 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b2340 | sixA | -0.9 | -3.9 | phosphohistidine phosphatase (NCBI) | compare |
| b3198 | kdsC | -0.9 | -2.5 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b4685 | yrbN | -0.9 | -1.6 | expressed protein (RefSeq) | compare |
| b0429 | cyoD | -0.9 | -3.8 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b0238 | gpt | -0.9 | -3.5 | xanthine phosphoribosyltransferase (NCBI) | compare |
| b3844 | fre | -0.9 | -4.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3811 | xerC | -0.9 | -2.6 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3035 | tolC | -0.9 | -5.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b4438 | cyaR | -0.9 | -2.4 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b1293 | sapB | -0.9 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3962 | udhA | -0.9 | -6.3 | putative oxidoreductase (VIMSS) | compare |
| b2104 | thiM | -0.9 | -2.6 | hydroxyethylthiazole kinase (NCBI) | compare |
| b3842 | rfaH | -0.9 | -4.0 | transcriptional activator RfaH (NCBI) | compare |
| b0888 | trxB | -0.9 | -2.7 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1861 | ruvA | -0.9 | -1.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4234 | yjgA | -0.9 | -3.6 | hypothetical protein (NCBI) | compare |
| b0431 | cyoB | -0.9 | -6.3 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3183 | obgE | -0.9 | -1.4 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0740 | tolB | -0.9 | -3.9 | translocation protein TolB precursor (NCBI) | compare |
| b0432 | cyoA | -0.8 | -5.4 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b0738 | tolR | -0.8 | -2.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1084 | rne | -0.8 | -2.5 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b0677 | nagA | -0.8 | -4.6 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2263 | yfbB | -0.8 | -2.7 | predicted peptidase (NCBI) | compare |
| b3204 | ptsN | -0.8 | -3.5 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2569 | lepA | -0.8 | -3.3 | GTP-binding protein LepA (NCBI) | compare |
| b0049 | apaH | -0.8 | -3.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b0728 | sucC | -0.8 | -4.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b3726 | pstA | -0.8 | -3.8 | phosphate transporter subunit (NCBI) | compare |
| b0145 | dksA | -0.8 | -2.8 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3649 | rpoZ | -0.8 | -2.5 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3261 | fis | -0.8 | -2.3 | DNA-binding protein Fis (NCBI) | compare |
| b3636 | rpmG | -0.8 | -1.7 | 50S ribosomal protein L33 (NCBI) | compare |
| b2456 | cchB | -0.8 | -3.4 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b3237 | argR | -0.8 | -3.6 | arginine repressor (NCBI) | compare |
| b1162 | ycgE | -0.8 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3979 | thrT | -0.8 | -1.0 | tRNA-Thr (NCBI) | compare |
| b1675 | ydhZ | -0.8 | -2.5 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | -0.8 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2501 | ppk | -0.8 | -5.4 | polyphosphate kinase (NCBI) | compare |
| b3761 | trpT | -0.8 | -1.5 | tRNA-Trp (NCBI) | compare |
| b0928 | aspC | -0.7 | -4.2 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b4505 | insX | -0.7 | -1.6 | predicted IS protein (RefSeq) | compare |
| b2512 | yfgL | -0.7 | -3.2 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3961 | oxyR | -0.7 | -4.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3652 | recG | -0.7 | -5.2 | ATP-dependent DNA helicase (NCBI) | compare |
| b0437 | clpP | -0.7 | -4.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2285 | nuoE | -0.7 | -1.5 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1811 | yoaH | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b1658 | purR | -0.7 | -3.5 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b1090 | plsX | -0.7 | -3.3 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b0564 | appY | -0.7 | -1.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0430 | cyoC | -0.7 | -2.6 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b1279 | yciS | -0.7 | -0.8 | conserved inner membrane protein (NCBI) | compare |
| b0782 | moaB | -0.7 | -1.5 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b3863 | polA | -0.7 | -1.0 | DNA polymerase I (NCBI) | compare |
| b0862 | artQ | -0.7 | -2.1 | arginine transporter subunit (NCBI) | compare |
| b0438 | clpX | -0.7 | -4.1 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0051 | ksgA | -0.7 | -3.4 | dimethyladenosine transferase (NCBI) | compare |
| b1836 | yebV | -0.7 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1627 | rsxA | -0.7 | -2.7 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b0481 | ybaK | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b1138 | ymfE | -0.7 | -1.1 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b4202 | rpsR | -0.7 | -1.1 | 30S ribosomal protein S18 (NCBI) | compare |
| b2618 | b2618 | -0.7 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0843 | ybjH | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.7 | cold shock protein E (NCBI) | compare |
| b1095 | fabF | -0.7 | -3.9 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3236 | mdh | -0.7 | -3.9 | malate dehydrogenase (NCBI) | compare |
| b0688 | pgm | -0.6 | -2.5 | phosphoglucomutase (NCBI) | compare |
| b1125 | potB | -0.6 | -2.8 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3792 | wzxE | -0.6 | -4.4 | O-antigen translocase (NCBI) | compare |
| b2513 | yfgM | -0.6 | -2.4 | hypothetical protein (NCBI) | compare |
| b3465 | yhhF | -0.6 | -3.5 | predicted methyltransferase (NCBI) | compare |
| b2025 | hisF | -0.6 | -2.3 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b1109 | ndh | -0.6 | -2.8 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b0920 | ycbC | -0.6 | -2.9 | conserved inner membrane protein (NCBI) | compare |
| b2808 | gcvA | -0.6 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1263 | trpD | -0.6 | -1.9 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b2564 | pdxJ | -0.6 | -2.5 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b3868 | glnG | -0.6 | -3.3 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b2937 | speB | -0.6 | -3.8 | agmatinase (NCBI) | compare |
| b3136 | agaS | -0.6 | -2.7 | tagatose-6-phosphate ketose/aldose isomerase (NCBI) | compare |
| b4180 | rlmB | -0.6 | -3.8 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b1124 | potC | -0.6 | -2.8 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b4042 | dgkA | -0.6 | -2.1 | diacylglycerol kinase (NCBI) | compare |
| b3617 | kbl | -0.6 | -3.7 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b1679 | sufE | -0.6 | -2.5 | cysteine desufuration protein SufE (NCBI) | compare |
| b3229 | sspA | -0.6 | -1.9 | stringent starvation protein A (NCBI) | compare |
| b0949 | uup | -0.6 | -3.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1213 | ychQ | -0.6 | -1.7 | predicted transcriptional regulator (NCBI) | compare |
| b2895 | fldB | -0.6 | -2.0 | flavodoxin 2 (NCBI) | compare |
| b1858 | znuC | -0.6 | -2.5 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b1855 | lpxM | -0.6 | -2.3 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3658 | selC | -0.6 | -1.6 | tRNA-Sec (NCBI) | compare |
| b4139 | aspA | -0.6 | -3.9 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |