Experiment set4IT032 for Echinicola vietnamensis KMM 6221, DSM 17526

Compare to:

Methyl-B-D-galactopyranoside 20mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
Echvi_2199 +1.6 2.1 hypothetical protein compare
Echvi_4561 +1.5 2.9 hypothetical protein compare
Echvi_3918 +1.3 1.7 Histone H1-like protein Hc1. compare
Echvi_4334 +1.2 2.8 hypothetical protein compare
Echvi_2232 +1.2 3.5 Uncharacterized small membrane protein compare
Echvi_0641 +1.1 0.7 Transposase and inactivated derivatives compare
Echvi_3914 +1.1 10.4 Transcriptional regulators compare
Echvi_1020 +1.1 1.7 hypothetical protein compare
Echvi_1491 +1.1 3.1 export-related chaperone CsaA compare
Echvi_3283 +1.1 2.2 Lactoylglutathione lyase and related lyases compare
Echvi_2401 +1.0 1.6 hypothetical protein compare
Echvi_4582 +1.0 2.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_0718 +1.0 1.5 segregation and condensation protein B compare
Echvi_3358 +1.0 2.1 hypothetical protein compare
Echvi_4048 +1.0 1.5 hypothetical protein compare
Echvi_4640 +0.9 1.1 hypothetical protein compare
Echvi_0757 +0.9 2.8 hypothetical protein compare
Echvi_4562 +0.9 2.8 hypothetical protein compare
Echvi_2463 +0.9 2.8 Translation initiation factor 1 (eIF-1/SUI1) and related proteins compare
Echvi_1662 +0.9 2.1 hypothetical protein compare
Echvi_3184 +0.8 2.8 hypothetical protein compare
Echvi_2606 +0.8 1.2 hypothetical protein compare
Echvi_4365 +0.8 1.0 hypothetical protein compare
Echvi_0436 +0.8 1.8 Bacterial mobilisation protein (MobC). compare
Echvi_3262 +0.8 1.0 hypothetical protein compare
Echvi_2193 +0.8 5.5 Transcriptional regulators compare
Echvi_2428 +0.8 1.0 iojap-like ribosome-associated protein compare
Echvi_3189 +0.8 1.7 Uncharacterized protein conserved in bacteria (DUF2188). compare
Echvi_4022 +0.8 1.6 hypothetical protein compare
Echvi_3068 +0.8 1.1 hypothetical protein compare
Echvi_4124 +0.8 2.0 Copper chaperone compare
Echvi_0761 +0.7 1.2 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family compare
Echvi_3723 +0.7 1.6 hypothetical protein compare
Echvi_2709 +0.7 2.2 Predicted enzyme related to lactoylglutathione lyase compare
Echvi_3370 +0.7 1.6 Predicted membrane protein compare
Echvi_3292 +0.7 1.0 hypothetical protein compare
Echvi_2079 +0.7 2.2 Uncharacterized conserved protein compare
Echvi_4062 +0.7 2.8 hypothetical protein compare
Echvi_0368 +0.7 2.2 hypothetical protein compare
Echvi_1247 +0.7 1.7 single stranded DNA-binding protein (ssb) compare
Echvi_0035 +0.7 3.8 Domain of Unknown Function (DUF349). compare
Echvi_4285 +0.7 2.8 hypothetical protein compare
Echvi_2860 +0.7 1.2 sugar-phosphate isomerases, RpiB/LacA/LacB family compare
Echvi_2685 +0.7 1.6 hypothetical protein compare
Echvi_4595 +0.7 0.9 hypothetical protein compare
Echvi_0946 +0.7 2.5 hypothetical protein compare
Echvi_1201 +0.7 2.0 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases compare
Echvi_0723 +0.7 1.7 hypothetical protein compare
Echvi_1944 +0.7 2.5 hypothetical protein compare
Echvi_4631 +0.7 4.2 (p)ppGpp synthetase, RelA/SpoT family compare
Echvi_3681 +0.7 2.6 Uncharacterized conserved protein compare
Echvi_4047 +0.7 2.8 hypothetical protein compare
Echvi_1038 +0.6 3.5 TM2 domain. compare
Echvi_3221 +0.6 2.0 hypothetical protein compare
Echvi_1136 +0.6 1.5 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases compare
Echvi_0395 +0.6 1.4 DNA repair proteins compare
Echvi_3287 +0.6 1.3 hypothetical protein compare
Echvi_0090 +0.6 0.8 Iron-sulfur cluster assembly accessory protein compare
Echvi_4369 +0.6 0.8 hypothetical protein compare
Echvi_0781 +0.6 4.3 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Echvi_4104 +0.6 1.0 hypothetical protein compare
Echvi_4073 +0.6 1.8 deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) compare
Echvi_3674 +0.6 1.9 Putative transposase. compare
Echvi_3952 +0.6 2.3 NAD-dependent aldehyde dehydrogenases compare
Echvi_1302 +0.6 1.9 Predicted transcriptional regulators compare
Echvi_3896 +0.6 1.7 PAP2 superfamily. compare
Echvi_0527 +0.6 2.3 Predicted endonuclease containing a URI domain compare
Echvi_3564 +0.6 1.1 Uncharacterized enzyme of thiazole biosynthesis compare
Echvi_2503 +0.6 1.2 hypothetical protein compare
Echvi_1286 +0.6 2.1 Transketolase, N-terminal subunit compare
Echvi_0854 +0.6 1.5 hypothetical protein compare
Echvi_0104 +0.6 0.8 Iron-sulfur cluster assembly accessory protein compare
Echvi_1109 +0.5 1.6 Predicted ATPase/kinase involved in NAD metabolism compare
Echvi_1812 +0.5 1.1 membrane protein, MarC family compare
Echvi_1535 +0.5 0.8 Glutamate dehydrogenase/leucine dehydrogenase compare
Echvi_0848 +0.5 3.0 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family compare
Echvi_2640 +0.5 1.5 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Echvi_4674 +0.5 1.6 Nucleotidyltransferase substrate binding protein like. compare
Echvi_2624 +0.5 1.3 hypothetical protein compare
Echvi_3910 +0.5 3.2 Transcriptional regulator/sugar kinase compare
Echvi_3537 +0.5 2.5 intracellular protease, PfpI family compare
Echvi_3070 +0.5 1.5 hypothetical protein compare
Echvi_1734 +0.5 2.0 Cystathionine beta-lyases/cystathionine gamma-synthases compare
Echvi_1728 +0.5 1.4 pseudouridylate synthase I compare
Echvi_0275 +0.5 1.0 Acetyl/propionyl-CoA carboxylase, alpha subunit compare
Echvi_3853 +0.5 0.7 Predicted transcriptional regulators compare
Echvi_3451 +0.5 0.6 hypothetical protein compare
Echvi_2447 +0.5 2.0 competence/damage-inducible protein CinA C-terminal domain compare
Echvi_2310 +0.5 2.3 conserved hypothetical protein YidD compare
Echvi_1749 +0.5 2.4 AraC-type DNA-binding domain-containing proteins compare
Echvi_0472 +0.5 1.0 hypothetical protein compare
Echvi_0760 +0.5 1.6 Predicted heme/steroid binding protein compare
Echvi_3591 +0.5 1.5 Uncharacterized conserved protein compare
Echvi_0965 +0.5 1.0 GAF domain-containing protein compare
Echvi_1960 +0.5 1.0 hypothetical protein compare
Echvi_2339 +0.5 1.1 Cytochrome bd-type quinol oxidase, subunit 1 compare
Echvi_0108 +0.5 1.1 DivIVA domain compare
Echvi_4237 +0.5 1.4 Predicted glycosyltransferases compare
Echvi_1747 +0.5 1.9 amino acid carrier protein compare
Echvi_3001 +0.5 1.8 Predicted membrane protein compare
Echvi_4654 +0.5 2.2 glutamate racemase compare
Echvi_3954 +0.5 2.2 exodeoxyribonuclease VII, large subunit compare
Echvi_2125 +0.5 1.7 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Echvi_3075 +0.5 0.9 hypothetical protein compare
Echvi_1782 +0.5 2.7 hypothetical protein compare
Echvi_4187 +0.5 2.9 Transposase and inactivated derivatives compare
Echvi_2583 +0.5 1.2 selT/selW/selH selenoprotein domain compare
Echvi_0910 +0.5 1.2 hypothetical protein compare
Echvi_0102 +0.5 1.0 Uncharacterized conserved protein compare
Echvi_0325 +0.5 1.2 Predicted transcriptional regulator with C-terminal CBS domains compare
Echvi_3027 +0.5 1.3 Uncharacterized protein conserved in bacteria compare
Echvi_3745 +0.5 1.8 hypothetical protein compare
Echvi_0680 +0.5 1.9 RND family efflux transporter, MFP subunit compare
Echvi_2734 +0.4 1.5 hypothetical protein compare
Echvi_1902 +0.4 2.4 uroporphyrin-III C-methyltransferase compare
Echvi_0514 +0.4 2.2 Uncharacterized membrane protein compare
Echvi_0899 +0.4 1.9 hypothetical protein compare
Echvi_2805 +0.4 2.9 MFS transporter, sugar porter (SP) family compare
Echvi_1435 +0.4 1.9 hypothetical protein compare
Echvi_3020 +0.4 1.6 hypothetical protein compare
Echvi_3824 +0.4 0.6 hypothetical protein compare
Echvi_0303 +0.4 1.6 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Echvi_2800 +0.4 1.4 hypothetical protein compare
Echvi_2198 +0.4 0.8 hypothetical protein compare
Echvi_0900 +0.4 1.4 Protein of unknown function (DUF2905). compare
Echvi_2746 +0.4 2.8 Beta-xylosidase compare
Echvi_1713 +0.4 2.0 Cation/multidrug efflux pump compare
Echvi_0721 +0.4 0.9 Uncharacterized protein conserved in bacteria compare
Echvi_0945 +0.4 1.2 hypothetical protein compare
Echvi_4319 +0.4 2.0 hypothetical protein compare
Echvi_3841 +0.4 2.2 Uncharacterized conserved protein compare
Echvi_0726 +0.4 1.9 RNA polymerase sigma factor, sigma-70 family compare
Echvi_3951 +0.4 2.5 Proline racemase compare
Echvi_3997 +0.4 1.0 hypothetical protein compare
Echvi_3162 +0.4 2.3 Universal stress protein UspA and related nucleotide-binding proteins compare
Echvi_3761 +0.4 0.9 Fructose-2,6-bisphosphatase compare
Echvi_2237 +0.4 1.7 hypothetical protein compare
Echvi_1519 +0.4 2.1 Na+/H+-dicarboxylate symporters compare
Echvi_2226 +0.4 1.1 hypothetical protein compare
Echvi_4025 +0.4 0.9 hypothetical protein compare
Echvi_2815 +0.4 1.8 Predicted membrane protein compare
Echvi_0031 +0.4 2.1 S1/P1 Nuclease. compare
Echvi_1386 +0.4 1.0 hypothetical protein compare
Echvi_0097 +0.4 1.9 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA compare
Echvi_2330 +0.4 1.4 hypothetical protein compare
Echvi_0497 +0.4 2.1 Beta-xylosidase compare
Echvi_4565 +0.4 1.4 Fe2+-dicitrate sensor, membrane component compare
Echvi_0047 +0.4 1.3 His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. compare
Echvi_4232 +0.4 1.4 Glycosyltransferase compare
Echvi_4455 +0.4 2.2 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Echvi_2280 +0.4 1.5 hypothetical protein compare
Echvi_0600 +0.4 1.6 L-serine dehydratase, iron-sulfur-dependent, alpha subunit compare
Echvi_2728 +0.4 1.5 Plant Basic Secretory Protein. compare
Echvi_0004 +0.4 1.0 hypothetical protein compare
Echvi_4587 +0.4 1.2 hypothetical protein compare
Echvi_1592 +0.4 1.7 Cytosine/adenosine deaminases compare
Echvi_3369 +0.4 1.1 Protein of unknown function (DUF2752). compare
Echvi_1034 +0.4 0.9 hypothetical protein compare
Echvi_1917 +0.4 1.4 hypothetical protein compare
Echvi_4376 +0.4 1.6 hypothetical protein compare
Echvi_2304 +0.4 2.2 ABC-type multidrug transport system, ATPase component compare
Echvi_1133 +0.4 1.8 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Echvi_4020 +0.4 1.8 hypothetical protein compare
Echvi_4411 +0.4 1.8 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Echvi_0209 +0.4 2.0 hypothetical protein compare
Echvi_1119 +0.4 0.6 hypothetical protein compare
Echvi_1854 +0.4 0.8 tRNA compare
Echvi_4093 +0.4 1.5 Bacteroides conjugative transposon TraM protein compare
Echvi_2174 +0.4 1.0 hypothetical protein compare
Echvi_1632 +0.4 1.9 Endoglucanase compare
Echvi_2168 +0.4 1.7 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 compare
Echvi_1190 +0.4 1.1 Membrane proteins related to metalloendopeptidases compare
Echvi_4081 +0.4 0.7 Malic enzyme compare
Echvi_2393 +0.4 0.6 uracil-DNA glycosylase compare
Echvi_4483 +0.4 1.7 Copper chaperone compare
Echvi_3131 +0.4 1.4 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family compare
Echvi_3196 +0.4 1.5 Copper chaperone compare
Echvi_0224 +0.4 1.5 hypothetical protein compare
Echvi_3739 +0.4 2.0 Response regulator of the LytR/AlgR family compare
Echvi_0296 +0.4 1.4 hypothetical protein compare
Echvi_1997 +0.4 1.6 hypothetical protein compare
Echvi_0790 +0.4 2.5 hypothetical protein compare
Echvi_0323 +0.4 1.9 Gluconolactonase compare
Echvi_1087 +0.4 2.0 Acetyltransferase (isoleucine patch superfamily) compare
Echvi_1752 +0.4 1.0 hypothetical protein compare
Echvi_2124 +0.4 1.6 hypothetical protein compare
Echvi_4099 +0.4 0.7 hypothetical protein compare
Echvi_2490 +0.4 2.2 Predicted peptidase compare
Echvi_0386 +0.4 2.2 hypothetical protein compare
Echvi_2550 +0.4 0.9 DNA repair proteins compare
Echvi_1987 +0.4 1.0 recombination protein RecR compare
Echvi_4361 +0.4 1.2 hypothetical protein compare
Echvi_0018 +0.4 1.6 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Echvi_3495 +0.4 2.2 Transcriptional regulators compare
Echvi_3284 +0.3 2.3 Homoserine dehydrogenase compare
Echvi_2733 +0.3 1.8 hypothetical protein compare
Echvi_0213 +0.3 1.4 hypothetical protein compare
Echvi_0302 +0.3 1.8 amidohydrolase compare
Echvi_3964 +0.3 1.3 MAF protein compare
Echvi_1030 +0.3 2.0 secondary thiamine-phosphate synthase enzyme compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Methyl-B-D-galactopyranoside in Echinicola vietnamensis KMM 6221, DSM 17526

For carbon source Methyl-B-D-galactopyranoside across organisms