Experiment set4IT032 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium bromate 5 mM

200 most important genes:

  gene name fitness t score description  
Atu1030 -5.5 -3.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3008 -2.8 -2.2 hypothetical protein compare
Atu0184 -2.7 -4.5 glucokinase compare
Atu2125 -2.6 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3469 -2.4 -3.3 phosphoglyceromutase compare
Atu2289 -2.4 -10.4 anthranilate synthase component I and II compare
Atu6165 -2.2 -1.0 hypothetical protein compare
Atu1688 -2.2 -4.8 indole-3-glycerol-phosphate synthase compare
Atu0030 -2.1 -2.2 phosphocarrier protein HPr compare
Atu1446 -2.1 -3.6 two component response regulator compare
Atu4616 -2.0 -2.9 dTDP-4-dehydrorhamnose reductase compare
Atu0017 -2.0 -2.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0723 -1.9 -2.5 FAD dependent oxidoreductase compare
Atu3598 -1.9 -1.9 thiol:disulfide interchange protein compare
Atu1307 -1.9 -5.5 dihydroorotase compare
Atu0486 -1.9 -4.5 dihydroorotate dehydrogenase compare
Atu0598 -1.8 -9.9 phosphogluconate dehydratase compare
Atu0189 -1.7 -4.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0201 -1.7 -2.7 hypothetical protein compare
Atu0103 -1.6 -8.3 penicillin-binding protein compare
Atu2057 -1.6 -2.6 DNA helicase II compare
Atu3739 -1.6 -2.2 phosphoglycerate kinase compare
Atu0043 -1.6 -2.7 imidazoleglycerol-phosphate dehydratase compare
Atu0399 -1.6 -5.5 dihydroorotase compare
Atu2113 -1.6 -2.1 N-acetylmuramoyl-L-alanine amidase compare
Atu3754 -1.5 -4.6 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1308 -1.5 -4.8 aspartate carbamoyl transferase catalytic subunit compare
Atu3001 -1.5 -2.8 hypothetical protein compare
Atu1163 -1.4 -2.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0031 -1.4 -2.0 PTS system, IIA component compare
Atu1687 -1.4 -4.6 anthranilate phosphoribosyltransferase compare
Atu0040 -1.4 -1.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0298 -1.4 -5.6 orotidine 5 compare
Atu2237 -1.3 -4.4 cytochrome c1 compare
Atu3443 -1.2 -3.5 hypothetical protein compare
Atu2017 -1.2 -1.4 hypothetical protein compare
Atu2728 -1.2 -4.6 beta (1-->2) glucan export ATP-binding protein compare
Atu2249 -1.2 -1.1 hypothetical protein compare
Atu0434 -1.2 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu8052 -1.2 -1.1 hypothetical protein compare
Atu2710 -1.1 -5.6 hypothetical protein compare
Atu2504 -1.1 -6.2 transcriptional regulator, GntR family compare
Atu4290 -1.1 -1.7 hypothetical protein compare
Atu2801 -1.1 -3.3 precorrin-2 C20 methyltransferase compare
Atu1028 -1.1 -2.9 hypothetical protein compare
Atu0971 -1.1 -4.0 two component sensor kinase compare
Atu0190 -1.1 -6.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2684 -1.1 -1.1 hypothetical protein compare
Atu0977 -1.1 -3.0 serine protease DO-like protease compare
Atu3121 -1.1 -1.3 cold shock protein compare
Atu3730 -1.0 -1.7 hypothetical protein compare
Atu1445 -1.0 -4.9 two component sensor kinase compare
Atu2740 -1.0 -3.1 transcriptional regulator, GntR family compare
Atu2798 -1.0 -2.2 precorrin-6y methyltransferase compare
Atu1844 -1.0 -2.6 Phosphoribosylformylglycinamidine synthetase compare
Atu0400 -1.0 -3.8 orotate phosphoribosyltransferase compare
Atu0025 -1.0 -1.5 hypothetical protein compare
Atu2809 -1.0 -4.0 cobalamin biosynthesis protein compare
Atu1359 -1.0 -1.1 dnaK deletion suppressor protein compare
Atu4514 -1.0 -4.0 RpiR family transcriptional regulator compare
Atu0647 -1.0 -3.1 phosphoribosylamine--glycine ligase compare
Atu4108 -1.0 -4.6 ribonuclease D compare
Atu4773 -0.9 -1.1 two component response regulator compare
Atu2239 -0.9 -1.9 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2238 -0.9 -5.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0188 -0.9 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu4317 -0.9 -1.6 TetR family transcriptional regulator compare
Atu3353 -0.9 -6.3 mannose-1-phosphate guanylyltransferase compare
Atu0538 -0.9 -1.9 hypothetical protein compare
Atu2073 -0.9 -2.5 membrane protein compare
Atu3727 -0.9 -3.0 hypothetical protein compare
Atu0346 -0.9 -1.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu8118 -0.9 -4.5 putative universal stress protein compare
Atu8035 -0.9 -1.8 hypothetical protein compare
Atu2793 -0.9 -3.7 cobyrinic acid a,c-diamide synthase compare
Atu4618 -0.9 -6.3 dTDP-rhamnose-3,5-epimerase compare
Atu1542 -0.8 -4.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0972 -0.8 -4.3 lipA protein compare
Atu0687 -0.8 -1.6 hypothetical protein compare
Atu1891 -0.8 -1.6 cobalamin biosynthesis protein compare
Atu3634 -0.8 -3.3 penicillin-binding protein dacf precursor compare
Atu0726 -0.8 -5.0 ring hydroxylating dioxygenase, alpha-subunit compare
Atu1075 -0.8 -3.2 amidophosphoribosyltransferase compare
Atu2058 -0.8 -2.6 hypothetical protein compare
Atu5540 -0.8 -0.7 hypothetical protein compare
Atu0953 -0.8 -0.8 hypothetical protein compare
Atu1774 -0.8 -3.3 ABC transporter, substrate binding protein (peptide) compare
Atu1874 -0.8 -1.7 RecA protein compare
Atu1952 -0.8 -1.1 hypothetical protein compare
Atu4095 -0.8 -1.6 hypothetical protein compare
Atu0357 -0.8 -3.9 phosphate starvation inducible protein compare
Atu2800 -0.8 -2.8 precorrin-3B C17-methyltransferase compare
Atu0039 -0.8 -0.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu4866 -0.8 -2.4 hypothetical protein compare
Atu3496 -0.8 -2.4 hypothetical protein compare
Atu8063 -0.7 -1.7 hypothetical protein compare
Atu2807 -0.7 -3.5 cob(I)alamin adenosyltransferase compare
Atu2640 -0.7 -2.0 hypothetical protein compare
Atu3472 -0.7 -2.4 2-oxoisovalerate dehydrogenase subunit beta compare
Atu4888 -0.7 -3.0 hypothetical protein compare
Atu0026 -0.7 -0.8 hypothetical protein compare
Atu0767 -0.7 -3.4 cytochrome c oxidase subunit II compare
Atu2805 -0.7 -2.6 cobalamin synthesis protein compare
Atu4075 -0.7 -3.6 glycogen synthase compare
Atu2802 -0.7 -4.7 precorrin-8X methylmutase compare
Atu3481 -0.7 -3.8 enoyl-CoA hydratase compare
Atu4613 -0.7 -5.1 glycosyltransferase compare
Atu0029 -0.7 -2.4 S-adenosylhomocysteine hydrolase compare
Atu2067 -0.7 -0.9 hypothetical protein compare
Atu6114 -0.7 -1.2 hypothetical protein compare
Atu0051 -0.7 -3.2 two component sensor kinase compare
Atu0920 -0.7 -2.9 hypothetical protein compare
Atu2554 -0.7 -1.1 lysyl-tRNA synthetase compare
Atu0809 -0.7 -1.3 hypothetical protein compare
Atu0824 -0.7 -1.0 hypothetical protein compare
Atu1140 -0.7 -3.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1570 -0.7 -0.9 hypothetical protein compare
Atu2439 -0.7 -0.6 hypothetical protein compare
Atu2437 -0.7 -2.4 hypothetical protein compare
Atu5468 -0.7 -1.6 hypothetical protein compare
Atu1457 -0.7 -2.1 hypothetical protein compare
Atu4040 -0.6 -2.0 hypothetical protein compare
Atu2379 -0.6 -3.7 phosphomannomutase compare
Atu0062 -0.6 -4.1 transcriptional regulator, ROK family compare
Atu3510 -0.6 -2.2 amidohydrolase compare
Atu2804 -0.6 -4.7 cobaltochelatase subunit compare
Atu8194 -0.6 -2.3 hypothetical protein compare
Atu5169 -0.6 -1.6 type IV secretion protein AvhB8 compare
Atu1566 -0.6 -0.8 hypothetical protein compare
Atu2036 -0.6 -4.3 acetolactate synthase III, large subunit compare
Atu3474 -0.6 -4.1 acyl-CoA dehydrogenase compare
Atu1588 -0.6 -3.1 homoserine dehydrogenase compare
Atu4711 -0.6 -1.6 two component sensor kinase compare
Atu0976 -0.6 -1.1 cycL protein compare
Atu4530 -0.6 -3.0 TetR family transcriptional regulator compare
Atu3476 -0.6 -2.6 AsnC family transcriptional regulator compare
Atu4161 -0.6 -0.9 hypothetical protein compare
Atu8143 -0.6 -1.6 hypothetical protein compare
Atu0690 -0.6 -1.2 hypothetical protein compare
Atu4617 -0.6 -3.8 dTDP-D-glucose-4,6-dehydratase compare
Atu1364 -0.6 -2.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu8191 -0.6 -1.5 hypothetical protein compare
Atu1339 -0.6 -2.2 ribonuclease E compare
Atu1685 -0.6 -0.7 hypothetical protein compare
Atu3075 -0.6 -3.5 TetR family transcriptional regulator compare
Atu2207 -0.6 -1.8 two component sensor kinase compare
Atu4599 -0.6 -3.6 IclR family transcriptional regulator compare
Atu4615 -0.6 -3.1 glucose-1-phosphate thymidylyltransferase compare
Atu1422 -0.6 -3.7 transcriptional regulator, MarR family compare
Atu1589 -0.6 -3.1 aminotransferase, class I compare
Atu0322 -0.6 -2.7 enoyl CoA hydratase compare
Atu0050 -0.6 -2.6 two component response regulator compare
Atu5036 -0.6 -3.1 hypothetical protein compare
Atu0698 -0.6 -1.7 hypothetical protein compare
Atu1619 -0.6 -1.8 protein-export membrane protein SECG compare
Atu1902 -0.6 -1.8 transketolase compare
Atu4882 -0.6 -1.7 hypothetical protein compare
Atu1850 -0.6 -1.4 phosphoribosylformylglycinamidine synthetase II compare
Atu8115 -0.6 -3.9 Hypothetical Protein compare
Atu2040 -0.6 -2.5 phosphoserine phosphatase compare
Atu0837 -0.6 -2.9 transcriptional regulator, MarR family compare
Atu3593 -0.6 -2.7 hypothetical protein compare
Atu1686 -0.6 -3.5 peptidyl-prolyl cis-trans isomerse D compare
Atu4418 -0.6 -2.1 glutaryl-CoA dehydrogenase compare
Atu3311 -0.6 -4.9 phosphomannose isomerase compare
Atu1110 -0.6 -2.0 cytosol aminopeptidase compare
Atu4527 -0.6 -1.1 hypothetical protein compare
Atu4889 -0.6 -2.5 hypothetical protein compare
Atu0781 -0.6 -1.6 hypothetical protein compare
Atu0468 -0.6 -3.1 hypothetical protein compare
Atu3486 -0.6 -1.4 DeoR family transcriptional regulator compare
Atu5034 -0.6 -1.7 hypothetical protein compare
Atu0768 -0.6 -3.5 cytochrome-c oxidase chain I compare
Atu1495 -0.6 -2.1 hypothetical protein compare
Atu0135 -0.6 -2.5 uracil phosphoribosyltransferase compare
Atu1447 -0.6 -1.5 two component sensor kinase compare
Atu3471 -0.6 -3.4 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
Atu0435 -0.6 -1.5 tRNA-Gly compare
Atu1679 -0.5 -1.3 peptidyl prolyl cis-trans isomerase compare
Atu4077 -0.5 -3.6 glycogen branching protein compare
Atu2183 -0.5 -3.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3045 -0.5 -3.0 hypothetical protein compare
Atu3095 -0.5 -1.3 hypothetical protein compare
Atu3011 -0.5 -1.9 ArsR family transcriptional regulator compare
Atu1333 -0.5 -1.1 outer membrane protein compare
Atu3479 -0.5 -3.2 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu0943 -0.5 -1.1 hypothetical protein compare
Atu0437 -0.5 -3.5 hypothetical protein compare
Atu3755 -0.5 -1.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4122 -0.5 -1.9 LysR family transcriptional regulator compare
Atu0038 -0.5 -2.4 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu5088 -0.5 -0.7 hypothetical protein compare
Atu3013 -0.5 -2.0 hypothetical protein compare
Atu2464 -0.5 -1.6 formyltetrahydrofolate deformylase compare
Atu4614 -0.5 -2.6 glycosyltransferase compare
Atu1775 -0.5 -1.6 polyketide biosynthesis associated protein compare
Atu3480 -0.5 -3.8 hydroxymethylglutaryl-CoA lyase compare
Atu2059 -0.5 -2.5 transcriptional regulator, TetR family compare
Atu0727 -0.5 -3.2 ferredoxin I compare
Atu0503 -0.5 -3.5 enoyl-CoA hydratase compare


Specific Phenotypes

For 6 genes in this experiment

For stress Sodium bromate in Agrobacterium fabrum C58

For stress Sodium bromate across organisms