Experiment set4IT031 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium hypochlorite 6.25 mM

200 most important genes:

  gene name fitness t score description  
Atu2289 -5.6 -10.1 anthranilate synthase component I and II compare
Atu1687 -5.6 -5.5 anthranilate phosphoribosyltransferase compare
Atu2584 -5.4 -3.7 hypothetical protein compare
Atu0029 -5.2 -8.0 S-adenosylhomocysteine hydrolase compare
Atu4217 -5.1 -2.5 TetR family transcriptional regulator compare
Atu4149 -5.0 -10.1 UDP-glucose 6-dehydrogenase compare
Atu0723 -4.9 -3.3 FAD dependent oxidoreductase compare
Atu0189 -4.7 -4.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2582 -4.5 -5.4 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2577 -4.4 -19.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1774 -4.4 -13.7 ABC transporter, substrate binding protein (peptide) compare
Atu3469 -4.4 -3.0 phosphoglyceromutase compare
Atu0190 -4.3 -9.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0876 -4.2 -2.7 superoxide dismutase compare
Atu2590 -4.1 -7.4 hypothetical protein compare
Atu1686 -3.9 -14.2 peptidyl-prolyl cis-trans isomerse D compare
Atu2583 -3.8 -8.1 glycosyltransferase compare
Atu2591 -3.8 -7.2 glucosyltransferase compare
Atu0017 -3.7 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4148 -3.7 -5.6 UDP-glucuronic acid epimerase compare
Atu2113 -3.7 -3.9 N-acetylmuramoyl-L-alanine amidase compare
Atu1688 -3.6 -3.5 indole-3-glycerol-phosphate synthase compare
Atu2057 -3.6 -3.4 DNA helicase II compare
Atu2718 -3.5 -6.5 homoserine O-succinyltransferase compare
Atu2592 -3.5 -4.1 hypothetical protein compare
Atu0399 -3.4 -8.9 dihydroorotase compare
Atu3017 -3.3 -2.1 phosphoglyceromutase compare
Atu1685 -3.3 -1.3 hypothetical protein compare
Atu1030 -3.3 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0188 -3.2 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0184 -3.0 -4.0 glucokinase compare
Atu0434 -2.9 -3.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2585 -2.8 -4.2 hypothetical protein compare
Atu3634 -2.8 -7.4 penicillin-binding protein dacf precursor compare
Atu1690 -2.8 -9.4 molybdopterin biosynthesis protein conserved
Atu1028 -2.7 -2.9 hypothetical protein compare
Atu3763 -2.6 -2.4 hypothetical protein compare
Atu0346 -2.6 -3.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1307 -2.6 -6.5 dihydroorotase compare
Atu0486 -2.5 -3.9 dihydroorotate dehydrogenase compare
Atu0074 -2.5 -9.5 molybdopterin biosynthesis protein compare
Atu0631 -2.4 -6.8 molybdenum cofactor biosynthesis protein B compare
Atu3754 -2.4 -6.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3468 -2.4 -1.3 hypothetical protein compare
Atu1695 -2.3 -11.9 molybdenum cofactor biosynthesis protein A compare
Atu1689 -2.3 -5.4 molybdenum cofactor biosynthesis protein C compare
Atu1570 -2.3 -1.5 hypothetical protein compare
Atu1308 -2.3 -4.8 aspartate carbamoyl transferase catalytic subunit compare
Atu0971 -2.3 -5.1 two component sensor kinase compare
Atu1446 -2.3 -3.2 two component response regulator compare
Atu0931 -2.3 -9.0 penicillin binding protein compare
Atu0400 -2.3 -4.5 orotate phosphoribosyltransferase compare
Atu0086 -2.3 -1.3 ribosome-binding factor A compare
Atu2155 -2.3 -14.6 methionine synthase compare
Atu3707 -2.2 -3.7 phosphoserine aminotransferase compare
Atu0041 -2.2 -2.2 glutamine amidotransferase compare
Atu2793 -2.2 -5.4 cobyrinic acid a,c-diamide synthase compare
Atu1126 -2.1 -6.1 molybdopterin converting factor, large subunit compare
Atu0479 -2.1 -5.5 ABC transporter, substrate binding protein (amino acid) compare
Atu1056 -2.1 -4.0 hypothetical protein compare
Atu0926 -2.1 -5.1 hypothetical protein compare
Atu0124 -2.1 -3.2 hypothetical protein compare
Atu0953 -2.1 -1.6 hypothetical protein compare
Atu2728 -2.1 -4.2 beta (1-->2) glucan export ATP-binding protein compare
Atu2799 -2.0 -4.2 precorrin-6x reductase compare
Atu1891 -2.0 -4.0 cobalamin biosynthesis protein compare
Atu0533 -2.0 -3.2 putative inhibitor of septum formation compare
Atu3886 -2.0 -6.5 lysophospholipase compare
Atu0103 -2.0 -8.9 penicillin-binding protein compare
Atu2620 -1.9 -1.7 hypothetical protein compare
Atu0908 -1.9 -3.5 transcriptional regulator compare
Atu3032 -1.9 -2.6 hypothetical protein compare
Atu1359 -1.9 -1.2 dnaK deletion suppressor protein compare
Atu1810 -1.9 -1.3 hypothetical protein compare
Atu1127 -1.9 -2.6 molybdopterin converting factor small subunit compare
Atu1588 -1.9 -8.0 homoserine dehydrogenase compare
Atu0298 -1.9 -5.1 orotidine 5 compare
Atu2710 -1.9 -5.3 hypothetical protein compare
Atu0977 -1.9 -3.2 serine protease DO-like protease compare
Atu0269 -1.8 -4.0 exodeoxyribonuclease VII large subunit compare
Atu2807 -1.8 -7.0 cob(I)alamin adenosyltransferase compare
Atu3727 -1.8 -4.6 hypothetical protein compare
Atu0598 -1.8 -7.0 phosphogluconate dehydratase compare
Atu3780 -1.8 -4.5 hypothetical protein compare
Atu2554 -1.8 -1.9 lysyl-tRNA synthetase compare
Atu2804 -1.7 -10.2 cobaltochelatase subunit compare
Atu2766 -1.7 -11.9 NAD-glutamate dehydrogenase compare
Atu3008 -1.7 -1.5 hypothetical protein compare
Atu2809 -1.7 -6.3 cobalamin biosynthesis protein compare
Atu2561 -1.7 -4.4 ABC transporter, substrate binding protein (molybdate) compare
Atu2805 -1.7 -5.9 cobalamin synthesis protein compare
Atu3998 -1.6 -7.4 8-amino-7-oxononanoate synthase compare
Atu1457 -1.6 -3.3 hypothetical protein compare
Atu0153 -1.6 -4.1 transcriptional regulator, Fur family compare
Atu4072 -1.6 -1.9 nodulation protein N compare
Atu2802 -1.6 -5.8 precorrin-8X methylmutase compare
Atu2489 -1.6 -6.0 hypothetical protein compare
Atu4616 -1.6 -1.8 dTDP-4-dehydrorhamnose reductase compare
Atu3598 -1.6 -1.4 thiol:disulfide interchange protein compare
Atu3755 -1.6 -4.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0125 -1.6 -4.8 peptide methionine sulfoxide reductase compare
Atu1140 -1.6 -4.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1845 -1.6 -2.7 phosphoribosylformylglycinamidine synthase I compare
Atu0101 -1.5 -2.9 cytochrome c compare
Atu4418 -1.5 -3.8 glutaryl-CoA dehydrogenase compare
Atu0031 -1.5 -1.6 PTS system, IIA component compare
Atu0401 -1.5 -4.1 fructokinase compare
Atu2640 -1.5 -2.8 hypothetical protein compare
Atu0784 -1.5 -2.9 hypothetical protein compare
Atu0925 -1.5 -3.4 hypothetical protein compare
Atu1844 -1.5 -1.8 Phosphoribosylformylglycinamidine synthetase compare
Atu3706 -1.5 -6.2 D-3-phosphoglycerate dehydrogenase compare
Atu2796 -1.5 -4.1 precorrin-4 C11-methyltransferase compare
Atu8180 -1.5 -4.3 hypothetical protein compare
Atu2795 -1.5 -4.5 cobalamin biosynthetic protein compare
Atu2803 -1.5 -2.9 Cobalamin biosynthesis associated protein compare
Atu2801 -1.5 -3.7 precorrin-2 C20 methyltransferase compare
Atu2831 -1.4 -3.6 glucose inhibited division protein A compare
Atu1141 -1.4 -5.0 Phosphoribosylglycinamide synthetase compare
Atu1698 -1.4 -3.9 molybdopterin-guanine dinucleotide biosynthesis protein A compare
Atu2555 -1.4 -3.0 L-lysine 2,3-aminomutase compare
Atu0647 -1.4 -4.7 phosphoribosylamine--glycine ligase compare
Atu1327 -1.4 -3.0 NADH-ubiquinone oxidoreductase compare
Atu4000 -1.4 -7.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Atu0039 -1.4 -1.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu1739 -1.4 -4.3 permease compare
Atu4001 -1.4 -5.4 3-oxoacyl-ACP synthase compare
Atu2798 -1.3 -3.4 precorrin-6y methyltransferase compare
Atu4773 -1.3 -1.7 two component response regulator compare
Atu1103 -1.3 -3.2 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1136 -1.3 -8.3 reductase compare
Atu2464 -1.3 -3.3 formyltetrahydrofolate deformylase compare
Atu3014 -1.3 -2.4 hypothetical protein compare
Atu0976 -1.3 -2.1 cycL protein compare
Atu8087 -1.3 -0.9 putative peptidoglycan binding protein compare
Atu1163 -1.3 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1542 -1.3 -4.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu3999 -1.3 -2.1 dithiobiotin synthetase compare
Atu2729 -1.3 -1.8 hypothetical protein compare
Atu1364 -1.2 -4.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0986 -1.2 -1.3 hypothetical protein compare
Atu1373 -1.2 -5.0 hypothetical protein compare
Atu1454 -1.2 -5.0 siroheme synthase compare
Atu3517 -1.2 -4.6 acetyltransferase compare
Atu2562 -1.2 -4.5 ABC transporter, membrane spanning protein (molybdate) compare
Atu4502 -1.2 -4.0 cobalamin synthesis protein compare
Atu0972 -1.2 -3.4 lipA protein compare
Atu2479 -1.2 -2.8 tRNA-Gly compare
Atu1075 -1.2 -5.2 amidophosphoribosyltransferase compare
Atu4075 -1.2 -6.0 glycogen synthase compare
Atu2800 -1.1 -1.7 precorrin-3B C17-methyltransferase compare
Atu3012 -1.1 -1.9 hypothetical protein compare
Atu1009 -1.1 -2.1 hypothetical protein compare
Atu3712 -1.1 -1.3 hypothetical protein compare
Atu0430 -1.1 -5.1 chaperonin (heat shock protein hsp33) compare
Atu0777 -1.1 -0.7 hypothetical protein compare
Atu1589 -1.1 -3.0 aminotransferase, class I compare
Atu5430 -1.1 -0.8 hypothetical protein compare
Atu0149 -1.1 -3.0 enoyl-(acyl-carrier-protein) reductase compare
Atu2207 -1.1 -3.7 two component sensor kinase compare
Atu2615 -1.1 -4.9 hypothetical protein compare
Atu3518 -1.1 -5.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu2806 -1.1 -3.9 hypothetical protein compare
Atu4869 -1.1 -3.3 hypothetical protein compare
Atu2662 -1.1 -1.2 acetyltransferase compare
Atu1499 -1.1 -4.1 penicillin binding protein compare
Atu2747 -1.1 -5.7 hypothetical protein compare
Atu0048 -1.0 -8.1 hypothetical protein compare
Atu1232 -1.0 -1.8 hypothetical protein compare
Atu5160 -1.0 -1.9 transcriptional regulator protein compare
Atu2200 -1.0 -1.9 cold shock protein compare
Atu0361 -1.0 -2.2 transcriptional regulator compare
Atu2808 -1.0 -3.7 cobyric acid synthase compare
Atu3997 -1.0 -6.0 biotin synthetase compare
Atu0025 -1.0 -1.4 hypothetical protein compare
Atu8035 -1.0 -1.3 hypothetical protein compare
Atu2124 -1.0 -4.2 transcriptional regulator, ArsR family compare
Atu2832 -1.0 -1.9 tRNA modification GTPase compare
Atu3394 -1.0 -3.3 iron ABC transporter ATPase compare
Atu0813 -1.0 -5.0 hypothetical protein compare
Atu3739 -1.0 -1.9 phosphoglycerate kinase compare
Atu2810 -1.0 -4.8 cobalamin biosynthetic protein compare
Atu2432 -1.0 -1.8 hypothetical protein compare
Atu2616 -1.0 -5.0 hypothetical protein compare
Atu0322 -1.0 -3.6 enoyl CoA hydratase compare
Atu0357 -0.9 -2.6 phosphate starvation inducible protein compare
Atu2532 -0.9 -1.8 transcriptional regulator, MarR family compare
Atu1920 -0.9 -3.1 hypothetical protein compare
Atu2083 -0.9 -1.4 DNA repair protein RecN compare
Atu0535 -0.9 -3.0 hypothetical protein compare
Atu0804 -0.9 -4.6 proton/glutamate transport protein compare
Atu1258 -0.9 -2.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu1456 -0.9 -4.4 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu4451 -0.9 -4.7 mannitol 2-dehydrogenase compare
Atu0185 -0.9 -2.3 methylglyoxal synthase compare
Atu4854 -0.9 -4.7 hypothetical protein compare
Atu1129 -0.9 -3.7 excinuclease ABC chain C compare
Atu5045 -0.9 -1.0 hypothetical protein compare
Atu3697 -0.9 -2.5 ATP-dependent protease LA 2 compare
Atu1445 -0.9 -2.6 two component sensor kinase compare


Specific Phenotypes

For 14 genes in this experiment

For stress Sodium hypochlorite in Agrobacterium fabrum C58

For stress Sodium hypochlorite across organisms