| | gene | name | fitness | t score | description | |
|---|
| b1095 | fabF | -4.7 | -11.1 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0630 | lipB | -3.8 | -2.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3839 | tatC | -3.1 | -12.7 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3405 | ompR | -3.1 | -7.1 | osmolarity response regulator (NCBI) | compare |
| b0014 | dnaK | -3.1 | -3.6 | molecular chaperone DnaK (NCBI) | compare |
| b0114 | aceE | -2.9 | -2.0 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b3095 | yqjA | -2.9 | -9.4 | conserved inner membrane protein (NCBI) | compare |
| b2297 | pta | -2.9 | -1.9 | phosphate acetyltransferase (NCBI) | compare |
| b3398 | yrfF | -2.8 | -4.9 | predicted inner membrane protein (NCBI) | compare |
| b3290 | trkA | -2.8 | -4.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0200 | gmhB | -2.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b3613 | yibP | -2.5 | -8.9 | putative membrane protein (VIMSS) | compare |
| b0053 | surA | -2.5 | -7.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1712 | ihfA | -2.4 | -5.0 | integration host factor subunit alpha (NCBI) | compare |
| b3493 | pitA | -2.4 | -11.8 | phosphate transporter, low-affinity (NCBI) | compare |
| b3462 | ftsX | -2.4 | -8.8 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0149 | mrcB | -2.3 | -15.0 | penicillin-binding protein 1b (NCBI) | compare |
| b3916 | pfkA | -2.3 | -6.0 | 6-phosphofructokinase (NCBI) | compare |
| b3621 | rfaC | -2.2 | -7.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4239 | treC | -2.2 | -8.0 | trehalose-6-P hydrolase (NCBI) | compare |
| b1109 | ndh | -2.2 | -6.6 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b1292 | sapC | -2.2 | -4.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3390 | aroK | -2.2 | -3.4 | shikimate kinase I (NCBI) | compare |
| b3619 | rfaD | -2.1 | -5.5 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3838 | tatB | -2.1 | -7.6 | sec-independent translocase (NCBI) | compare |
| b3386 | rpe | -2.1 | -1.4 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2935 | tktA | -2.0 | -4.4 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0019 | nhaA | -2.0 | -9.4 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b3052 | rfaE | -2.0 | -6.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3863 | polA | -1.9 | -2.2 | DNA polymerase I (NCBI) | compare |
| b1290 | sapF | -1.9 | -3.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1236 | galU | -1.9 | -7.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2620 | smpB | -1.9 | -4.1 | SsrA-binding protein (NCBI) | compare |
| b3463 | ftsE | -1.9 | -6.0 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3426 | glpD | -1.9 | -8.6 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b3725 | pstB | -1.9 | -3.8 | phosphate transporter subunit (NCBI) | compare |
| b3933 | ftsN | -1.9 | -11.0 | essential cell division protein (NCBI) | compare |
| b3414 | gntY | -1.9 | -7.4 | predicted gluconate transport associated protein (NCBI) | compare |
| b0439 | lon | -1.8 | -6.7 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1105 | ycfM | -1.8 | -4.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1291 | sapD | -1.7 | -3.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0429 | cyoD | -1.7 | -6.1 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b3849 | trkH | -1.6 | -10.7 | potassium transporter (NCBI) | compare |
| b2820 | recB | -1.6 | -3.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0049 | apaH | -1.6 | -6.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b3842 | rfaH | -1.5 | -5.8 | transcriptional activator RfaH (NCBI) | compare |
| b0065 | yabI | -1.5 | -6.0 | conserved inner membrane protein (NCBI) | compare |
| b0161 | degP | -1.5 | -4.9 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b3404 | envZ | -1.5 | -8.8 | osmolarity sensor protein (NCBI) | compare |
| b0015 | dnaJ | -1.4 | -8.8 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b2279 | nuoK | -1.4 | -2.9 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0683 | fur | -1.4 | -2.2 | ferric uptake regulator (NCBI) | compare |
| b3631 | rfaG | -1.4 | -11.7 | glucosyltransferase I (NCBI) | compare |
| b3204 | ptsN | -1.4 | -5.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2175 | spr | -1.4 | -3.9 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b4222 | ytfP | -1.4 | -4.9 | hypothetical protein (NCBI) | compare |
| b0428 | cyoE | -1.4 | -6.8 | protoheme IX farnesyltransferase (NCBI) | compare |
| b0145 | dksA | -1.3 | -4.3 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0890 | ftsK | -1.3 | -7.6 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3630 | rfaP | -1.3 | -9.7 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0222 | lpcA | -1.3 | -3.2 | phosphoheptose isomerase (NCBI) | compare |
| b0738 | tolR | -1.3 | -3.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3912 | cpxR | -1.3 | -8.3 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b3811 | xerC | -1.3 | -3.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2567 | rnc | -1.2 | -2.2 | ribonuclease III (NCBI) | compare |
| b2330 | yfcB | -1.2 | -2.4 | putative adenine-specific methylase (VIMSS) | compare |
| b2318 | truA | -1.2 | -4.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2688 | gshA | -1.2 | -7.3 | glutamate--cysteine ligase (NCBI) | compare |
| b3609 | secB | -1.2 | -2.4 | export protein SecB (NCBI) | compare |
| b0431 | cyoB | -1.2 | -8.5 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3620 | rfaF | -1.2 | -5.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2830 | nudH | -1.2 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0430 | cyoC | -1.2 | -4.0 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2314 | dedD | -1.2 | -3.3 | putative lipoprotein (VIMSS) | compare |
| b2910 | zapA | -1.1 | -4.5 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b3836 | b3836 | -1.1 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2614 | grpE | -1.1 | -2.0 | heat shock protein (NCBI) | compare |
| b0912 | ihfB | -1.1 | -3.5 | integration host factor subunit beta (NCBI) | compare |
| b4025 | pgi | -1.1 | -6.9 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2340 | sixA | -1.1 | -3.3 | phosphohistidine phosphatase (NCBI) | compare |
| b1863 | ruvC | -1.1 | -3.8 | Holliday junction resolvase (NCBI) | compare |
| b4042 | dgkA | -1.1 | -3.5 | diacylglycerol kinase (NCBI) | compare |
| b3162 | deaD | -1.1 | -5.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1183 | umuD | -1.1 | -2.6 | DNA polymerase V, subunit D (NCBI) | compare |
| b3726 | pstA | -1.1 | -5.5 | phosphate transporter subunit (NCBI) | compare |
| b0957 | ompA | -1.1 | -3.0 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4472 | yhdP | -1.1 | -9.3 | conserved membrane protein, predicted transporter (NCBI) | compare |
| b2906 | visC | -1.1 | -5.2 | hypothetical protein (NCBI) | compare |
| b2894 | xerD | -1.1 | -1.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1175 | minD | -1.0 | -4.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3169 | nusA | -1.0 | -2.8 | transcription elongation factor NusA (NCBI) | compare |
| b2947 | gshB | -1.0 | -3.8 | glutathione synthetase (NCBI) | compare |
| b3042 | b3042 | -1.0 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3237 | argR | -1.0 | -4.5 | arginine repressor (NCBI) | compare |
| b0432 | cyoA | -1.0 | -6.9 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b4155 | yjeA | -1.0 | -1.6 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b0926 | ycbK | -1.0 | -2.8 | hypothetical protein (NCBI) | compare |
| b4699 | fnrS | -1.0 | -1.2 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1167 | ymgC | -1.0 | -1.8 | hypothetical protein (NCBI) | compare |
| b3387 | dam | -1.0 | -7.6 | DNA adenine methylase (NCBI) | compare |
| b1192 | ldcA | -0.9 | -4.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b2058 | wcaB | -0.9 | -1.2 | predicted acyl transferase (NCBI) | compare |
| b0080 | fruR | -0.9 | -4.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4375 | prfC | -0.9 | -5.5 | peptide chain release factor 3 (NCBI) | compare |
| b2699 | recA | -0.9 | -2.3 | recombinase A (NCBI) | compare |
| b2528 | iscA | -0.9 | -1.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b3465 | yhhF | -0.9 | -4.2 | predicted methyltransferase (NCBI) | compare |
| b0843 | ybjH | -0.9 | -2.4 | hypothetical protein (NCBI) | compare |
| b1514 | lsrC | -0.9 | -2.1 | AI2 transporter (NCBI) | compare |
| b0441 | ppiD | -0.9 | -6.6 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b3261 | fis | -0.9 | -2.5 | DNA-binding protein Fis (NCBI) | compare |
| b2822 | recC | -0.9 | -3.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b0920 | ycbC | -0.8 | -3.3 | conserved inner membrane protein (NCBI) | compare |
| b3611 | yibN | -0.8 | -3.0 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b2276 | nuoN | -0.8 | -4.1 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1840 | yebZ | -0.8 | -3.7 | predicted inner membrane protein (NCBI) | compare |
| b2287 | nuoB | -0.8 | -2.9 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1379 | hslJ | -0.8 | -3.0 | heat-inducible protein (NCBI) | compare |
| b4451 | ryhB | -0.8 | -1.3 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2908 | pepP | -0.8 | -4.3 | proline aminopeptidase P II (NCBI) | compare |
| b1627 | rsxA | -0.8 | -3.1 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b3742 | mioC | -0.8 | -3.2 | flavodoxin (NCBI) | compare |
| b3706 | trmE | -0.7 | -4.1 | tRNA modification GTPase (NCBI) | compare |
| b3807 | cyaY | -0.7 | -4.5 | frataxin-like protein (NCBI) | compare |
| b2937 | speB | -0.7 | -4.5 | agmatinase (NCBI) | compare |
| b0579 | ybdF | -0.7 | -2.2 | hypothetical protein (NCBI) | compare |
| b2512 | yfgL | -0.7 | -3.2 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0767 | ybhE | -0.7 | -3.2 | 6-phosphogluconolactonase (NCBI) | compare |
| b2278 | nuoL | -0.7 | -5.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2188 | yejM | -0.7 | -4.9 | predicted hydrolase, inner membrane (NCBI) | compare |
| b0232 | yafN | -0.7 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b4460 | araH | -0.7 | -2.6 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1176 | minC | -0.7 | -2.8 | septum formation inhibitor (NCBI) | compare |
| b2352 | yfdI | -0.7 | -2.8 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b3935 | priA | -0.7 | -1.5 | primosome assembly protein PriA (NCBI) | compare |
| b1855 | lpxM | -0.7 | -2.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0427 | yajR | -0.7 | -4.8 | putative transport protein (VIMSS) | compare |
| b2572 | rseA | -0.7 | -2.3 | anti-sigma factor (NCBI) | compare |
| b3931 | hslU | -0.7 | -5.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1235 | rssB | -0.7 | -4.3 | response regulator of RpoS (NCBI) | compare |
| b1693 | aroD | -0.7 | -3.4 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3806 | cyaA | -0.7 | -3.0 | adenylate cyclase (NCBI) | compare |
| b1426 | ydcH | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2277 | nuoM | -0.7 | -3.8 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3650 | spoT | -0.7 | -2.5 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b4413 | sokC | -0.7 | -1.4 | regulatory antisense RNA (NCBI) | compare |
| b0226 | dinJ | -0.7 | -1.7 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2280 | nuoJ | -0.7 | -3.2 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2518 | ndk | -0.7 | -1.2 | nucleoside diphosphate kinase (NCBI) | compare |
| b0814 | ompX | -0.6 | -2.6 | outer membrane protein X (NCBI) | compare |
| b1038 | csgF | -0.6 | -2.6 | predicted transport protein (NCBI) | compare |
| b2282 | nuoH | -0.6 | -2.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2025 | hisF | -0.6 | -2.4 | imidazole glycerol phosphate synthase subunit HisF (NCBI) | compare |
| b1305 | pspB | -0.6 | -2.2 | phage shock protein B (NCBI) | compare |
| b2286 | nuoC | -0.6 | -2.7 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1630 | rsxD | -0.6 | -3.7 | electron transport complex protein RnfD (NCBI) | compare |
| b2283 | nuoG | -0.6 | -4.0 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b4438 | cyaR | -0.6 | -1.9 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b0784 | moaD | -0.6 | -1.8 | molybdopterin synthase, small subunit (NCBI) | compare |
| b1388 | paaA | -0.6 | -2.6 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b3545 | proK | -0.6 | -2.0 | tRNA-Pro (NCBI) | compare |
| b1187 | fadR | -0.6 | -3.0 | fatty acid metabolism regulator (NCBI) | compare |
| b0450 | glnK | -0.6 | -1.5 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1811 | yoaH | -0.6 | -2.1 | hypothetical protein (NCBI) | compare |
| b1273 | yciN | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b0688 | pgm | -0.6 | -2.0 | phosphoglucomutase (NCBI) | compare |
| b3834 | yigP | -0.6 | -3.1 | hypothetical protein (NCBI) | compare |
| b2204 | napH | -0.6 | -2.6 | quinol dehydrogenase membrane component (NCBI) | compare |
| b3632 | rfaQ | -0.6 | -5.4 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4644 | ypjI | -0.6 | -2.0 | no description | compare |
| b0263 | afuB | -0.6 | -1.7 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b2285 | nuoE | -0.6 | -1.3 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3228 | sspB | -0.6 | -2.2 | ClpXP protease specificity-enhancing factor (NCBI) | compare |
| b0458 | ylaC | -0.6 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b1045 | ymdB | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b1084 | rne | -0.6 | -2.0 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2052 | fcl | -0.6 | -2.9 | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) | compare |
| b1293 | sapB | -0.6 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2113 | mrp | -0.6 | -2.9 | putative ATPase (VIMSS) | compare |
| b0739 | tolA | -0.6 | -2.6 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3870 | glnA | -0.6 | -1.9 | glutamine synthetase (NCBI) | compare |
| b1836 | yebV | -0.6 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3781 | trxA | -0.6 | -1.8 | thioredoxin 1 (VIMSS) | compare |
| b1332 | ynaJ | -0.6 | -0.8 | predicted inner membrane protein (NCBI) | compare |
| b3727 | pstC | -0.6 | -2.2 | phosphate transporter subunit (NCBI) | compare |
| b1890 | motA | -0.6 | -2.5 | flagellar motor protein MotA (NCBI) | compare |
| b0167 | glnD | -0.6 | -2.2 | PII uridylyl-transferase (NCBI) | compare |
| b1658 | purR | -0.6 | -2.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3932 | hslV | -0.6 | -3.8 | ATP-dependent protease peptidase subunit (NCBI) | compare |
| b1083 | flgL | -0.6 | -2.7 | flagellar hook-associated protein L (NCBI) | compare |
| b1347 | ydaC | -0.5 | -1.5 | Rac prophage; predicted protein (NCBI) | compare |
| b2811 | ygdK | -0.5 | -2.1 | predicted Fe-S metabolism protein (NCBI) | compare |
| b2229 | b2229 | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4505 | insX | -0.5 | -1.3 | predicted IS protein (RefSeq) | compare |
| b3741 | gidA | -0.5 | -3.4 | glucose-inhibited division protein A (NCBI) | compare |
| b2564 | pdxJ | -0.5 | -2.3 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b1101 | ptsG | -0.5 | -4.1 | fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) | compare |
| b3636 | rpmG | -0.5 | -0.6 | 50S ribosomal protein L33 (NCBI) | compare |
| b3940 | metL | -0.5 | -3.7 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b4685 | yrbN | -0.5 | -1.3 | expressed protein (RefSeq) | compare |