Experiment set4IT025 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium arsenate dibasic heptahydrate 50 mM

200 most important genes:

  gene name fitness t score description  
Atu1739 -4.0 -6.1 permease compare
Atu1491 -3.9 -7.6 sodium bile acid symporter family protein conserved
Atu0039 -3.4 -4.0 imidazoleglycerol-phosphate synthase cyclase compare
Atu1030 -3.1 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0017 -3.1 -2.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1492 -2.9 -11.0 transcriptional regulator, ArsR family compare
Atu1687 -2.7 -6.0 anthranilate phosphoribosyltransferase compare
Atu1308 -2.6 -6.2 aspartate carbamoyl transferase catalytic subunit compare
Atu0434 -2.5 -3.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0400 -2.5 -6.4 orotate phosphoribosyltransferase compare
Atu4616 -2.5 -3.1 dTDP-4-dehydrorhamnose reductase compare
Atu1307 -2.5 -5.5 dihydroorotase compare
Atu1688 -2.3 -4.3 indole-3-glycerol-phosphate synthase compare
Atu1844 -2.3 -4.1 Phosphoribosylformylglycinamidine synthetase compare
Atu1446 -2.2 -3.7 two component response regulator compare
Atu2289 -2.2 -11.5 anthranilate synthase component I and II compare
Atu4896 -2.1 -3.9 acetyltransferase compare
Atu1490 -2.0 -3.4 arsenate reductase compare
Atu0225 -2.0 -1.6 hypothetical protein compare
Atu0298 -1.7 -5.9 orotidine 5 compare
Atu0647 -1.6 -6.4 phosphoribosylamine--glycine ligase compare
Atu1686 -1.5 -8.9 peptidyl-prolyl cis-trans isomerse D compare
Atu0486 -1.5 -3.7 dihydroorotate dehydrogenase compare
Atu0399 -1.5 -5.0 dihydroorotase compare
Atu1075 -1.5 -7.9 amidophosphoribosyltransferase compare
Atu3008 -1.5 -1.9 hypothetical protein compare
Atu0026 -1.5 -1.3 hypothetical protein compare
Atu3707 -1.4 -2.2 phosphoserine aminotransferase compare
Atu1685 -1.4 -1.2 hypothetical protein compare
Atu2057 -1.4 -2.6 DNA helicase II compare
Atu1028 -1.4 -3.3 hypothetical protein compare
Atu3754 -1.3 -4.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0769 -1.3 -1.7 protoheme IX farnesyltransferase compare
Atu3730 -1.2 -1.9 hypothetical protein compare
Atu2662 -1.2 -1.7 acetyltransferase compare
Atu1845 -1.2 -3.3 phosphoribosylformylglycinamidine synthase I compare
Atu3750 -1.2 -2.9 thiamine-phosphate pyrophosphorylase compare
Atu1163 -1.2 -2.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4897 -1.2 -2.3 hypothetical protein compare
Atu0401 -1.1 -6.0 fructokinase compare
Atu4881 -1.1 -4.7 hypothetical protein compare
Atu3009 -1.1 -1.7 exopolysaccharide production protein compare
Atu1140 -1.1 -3.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2802 -1.1 -5.6 precorrin-8X methylmutase compare
Atu4773 -1.1 -0.8 two component response regulator compare
Atu4471 -1.0 -6.4 ABC transporter substrate-binding protein compare
Atu3712 -1.0 -1.9 hypothetical protein compare
Atu3461 -1.0 -2.3 GntR family transcriptional regulator compare
Atu3011 -1.0 -2.8 ArsR family transcriptional regulator compare
Atu3763 -1.0 -1.5 hypothetical protein compare
Atu2238 -1.0 -4.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0972 -1.0 -4.4 lipA protein compare
Atu1891 -1.0 -1.8 cobalamin biosynthesis protein compare
Atu0062 -1.0 -5.0 transcriptional regulator, ROK family compare
Atu1141 -1.0 -3.8 Phosphoribosylglycinamide synthetase compare
Atu0190 -1.0 -5.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0421 -1.0 -1.4 ABC transporter, membrane spanning protein compare
Atu4317 -1.0 -1.4 TetR family transcriptional regulator compare
Atu8194 -0.9 -2.2 hypothetical protein compare
Atu3727 -0.9 -3.8 hypothetical protein compare
Atu2710 -0.9 -4.4 hypothetical protein compare
Atu0598 -0.9 -4.9 phosphogluconate dehydratase compare
Atu3121 -0.9 -1.4 cold shock protein compare
Atu0322 -0.9 -4.5 enoyl CoA hydratase compare
Atu4468 -0.9 -5.1 iron transport ABC transporter permease compare
Atu1850 -0.9 -3.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3183 -0.9 -0.9 hypothetical protein compare
Atu0189 -0.9 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu3001 -0.9 -3.0 hypothetical protein compare
Atu1110 -0.9 -3.1 cytosol aminopeptidase compare
Atu3755 -0.9 -3.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0101 -0.9 -4.2 cytochrome c compare
Atu3026 -0.9 -4.6 short chain dehydrogenase compare
Atu0894 -0.9 -2.4 ABC transporter, membrane spanning protein compare
Atu1542 -0.9 -3.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0687 -0.9 -1.1 hypothetical protein compare
Atu0103 -0.9 -5.4 penicillin-binding protein compare
Atu3015 -0.9 -5.4 hypothetical protein compare
Atu2548 -0.9 -5.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2041 -0.9 -2.0 acetyltransferase compare
Atu4866 -0.9 -2.8 hypothetical protein compare
Atu8161 -0.9 -1.2 hypothetical protein compare
Atu2649 -0.8 -2.7 hypothetical protein compare
Atu1774 -0.8 -4.2 ABC transporter, substrate binding protein (peptide) compare
Atu0184 -0.8 -1.6 glucokinase compare
Atu2798 -0.8 -2.9 precorrin-6y methyltransferase compare
Atu0585 -0.8 -1.6 hypothetical protein compare
Atu3017 -0.8 -1.5 phosphoglyceromutase compare
Atu2073 -0.8 -2.8 membrane protein compare
Atu3496 -0.8 -2.2 hypothetical protein compare
Atu2808 -0.8 -3.5 cobyric acid synthase compare
Atu4893 -0.8 -3.3 hypothetical protein compare
Atu3006 -0.8 -3.4 hypothetical protein compare
Atu3010 -0.8 -4.7 hypothetical protein compare
Atu4882 -0.8 -2.3 hypothetical protein compare
Atu8202 -0.8 -2.2 hypothetical protein compare
Atu2650 -0.8 -5.0 glycerol-3-phosphate dehydrogenase compare
Atu1339 -0.8 -2.6 ribonuclease E compare
Atu1223 -0.8 -1.2 hypothetical protein compare
Atu0501 -0.8 -5.6 acyl-CoA dehydrogenase compare
Atu3019 -0.8 -5.3 hypothetical protein compare
Atu3032 -0.8 -2.9 hypothetical protein compare
Atu8055 -0.7 -1.7 hypothetical protein compare
Atu4854 -0.7 -3.6 hypothetical protein compare
Atu5145 -0.7 -2.2 acetyltransferase compare
Atu1007 -0.7 -2.4 hypothetical protein compare
Atu3739 -0.7 -2.0 phosphoglycerate kinase compare
Atu0031 -0.7 -1.3 PTS system, IIA component compare
Atu4618 -0.7 -5.1 dTDP-rhamnose-3,5-epimerase compare
Atu1566 -0.7 -0.9 hypothetical protein compare
Atu4139 -0.7 -2.3 hypothetical protein compare
Atu1468 -0.7 -3.7 hypothetical protein compare
Atu4458 -0.7 -1.5 hypothetical protein compare
Atu3706 -0.7 -4.3 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -0.7 -2.6 phosphoserine phosphatase compare
Atu2442 -0.7 -2.2 hypothetical protein compare
Atu3016 -0.7 -3.4 phosphoglyceromutase compare
Atu3020 -0.7 -2.8 GntR family transcriptional regulator compare
Atu8054 -0.7 -0.5 hypothetical protein compare
Atu2805 -0.7 -2.9 cobalamin synthesis protein compare
Atu8025 -0.7 -1.3 hypothetical protein compare
Atu4865 -0.7 -5.2 oxidoreductase compare
Atu2804 -0.7 -4.5 cobaltochelatase subunit compare
Atu0185 -0.7 -2.8 methylglyoxal synthase compare
Atu0503 -0.7 -5.2 enoyl-CoA hydratase compare
Atu4872 -0.7 -4.4 LysR family transcriptional regulator compare
Atu3018 -0.7 -2.6 hypothetical protein compare
Atu1588 -0.7 -4.1 homoserine dehydrogenase compare
Atu2113 -0.7 -1.9 N-acetylmuramoyl-L-alanine amidase compare
Atu3697 -0.7 -2.8 ATP-dependent protease LA 2 compare
Atu4887 -0.7 -3.2 hypothetical protein compare
Atu1489 -0.7 -4.2 arsenical resistance protein compare
Atu4890 -0.7 -1.4 IS426 transposase compare
Atu3021 -0.7 -3.9 sugar ABC transporter ATPase compare
Atu0845 -0.7 -1.8 hypothetical protein compare
Atu0188 -0.7 -1.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2237 -0.7 -2.3 cytochrome c1 compare
Atu4876 -0.7 -5.3 oxidoreductase compare
Atu4874 -0.7 -3.7 hypothetical protein compare
Atu2809 -0.7 -3.4 cobalamin biosynthesis protein compare
Atu4894 -0.7 -3.8 transposase compare
Atu1629 -0.7 -1.1 transcriptional regulator, ArsR family compare
Atu3120 -0.7 -1.0 hypothetical protein compare
Atu0419 -0.7 -1.8 two component sensor kinase compare
Atu0977 -0.7 -2.5 serine protease DO-like protease compare
Atu0976 -0.7 -2.3 cycL protein compare
Atu2800 -0.7 -1.1 precorrin-3B C17-methyltransferase compare
Atu3033 -0.7 -4.0 hypothetical protein compare
Atu3014 -0.7 -2.1 hypothetical protein compare
Atu2207 -0.7 -2.1 two component sensor kinase compare
Atu3013 -0.7 -3.1 hypothetical protein compare
Atu8118 -0.7 -2.4 putative universal stress protein compare
Atu4614 -0.7 -4.8 glycosyltransferase compare
Atu4137 -0.7 -1.6 hypothetical protein compare
Atu4880 -0.7 -5.0 AraC family transcriptional regulator compare
Atu4470 -0.7 -3.5 iron ABC transporter ATPase compare
Atu4870 -0.7 -5.2 NADP-dependent quinone oxidoreductase compare
Atu4873 -0.7 -2.9 TetR family transcriptional regulator compare
Atu4888 -0.7 -2.4 hypothetical protein compare
Atu4108 -0.7 -4.4 ribonuclease D compare
Atu1359 -0.6 -0.8 dnaK deletion suppressor protein compare
Atu4892 -0.6 -5.3 hypothetical protein compare
Atu4217 -0.6 -0.9 TetR family transcriptional regulator compare
Atu3025 -0.6 -4.8 oligo alginate lyase compare
Atu0971 -0.6 -3.0 two component sensor kinase compare
Atu3023 -0.6 -3.4 sugar ABC transporter permease compare
Atu4161 -0.6 -1.3 hypothetical protein compare
Atu2772 -0.6 -2.5 Invasion protein A compare
Atu2270 -0.6 -1.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu3029 -0.6 -3.3 glucarate dehydratase compare
Atu4093 -0.6 -1.6 hypothetical protein compare
Atu4878 -0.6 -2.3 hypothetical protein compare
Atu3598 -0.6 -1.2 thiol:disulfide interchange protein compare
Atu2578 -0.6 -3.2 cAMP-dependent protein kinase regulatory subunit compare
Atu1445 -0.6 -2.4 two component sensor kinase compare
Atu0025 -0.6 -1.0 hypothetical protein compare
Atu4869 -0.6 -2.0 hypothetical protein compare
Atu5148 -0.6 -1.9 hypothetical protein compare
Atu2789 -0.6 -2.1 hypothetical protein compare
Atu4889 -0.6 -2.0 hypothetical protein compare
Atu6186 -0.6 -2.7 virA/G regulated protein compare
Atu2746 -0.6 -2.7 hypothetical protein compare
Atu5125 -0.6 -2.6 GntR family transcriptional regulator compare
Atu2692 -0.6 -2.4 intracellular septation protein compare
Atu2803 -0.6 -2.3 Cobalamin biosynthesis associated protein compare
Atu2555 -0.6 -1.9 L-lysine 2,3-aminomutase compare
Atu1437 -0.6 -2.8 hypothetical protein compare
Atu3036 -0.6 -3.3 dipeptide ABC transporter permease compare
Atu3034 -0.6 -2.8 ROK family transcriptional regulator compare
Atu0272 -0.6 -2.8 transcriptional regulator, MarR family compare
Atu0723 -0.6 -1.4 FAD dependent oxidoreductase compare
Atu4418 -0.6 -2.9 glutaryl-CoA dehydrogenase compare
Atu1364 -0.6 -2.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0142 -0.6 -1.7 cytochrome o ubiquinol oxidase subunit II compare
Atu1286 -0.6 -2.9 hypothetical protein compare
Atu2807 -0.6 -2.9 cob(I)alamin adenosyltransferase compare
Atu4868 -0.6 -4.2 oxidoreductase compare
Atu2801 -0.6 -1.8 precorrin-2 C20 methyltransferase compare
Atu0943 -0.6 -1.6 hypothetical protein compare
Atu4867 -0.6 -2.9 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Sodium arsenate dibasic heptahydrate in Agrobacterium fabrum C58

For stress Sodium arsenate dibasic heptahydrate across organisms