Experiment set4IT020 for Agrobacterium fabrum C58

Compare to:

R2A with Calcium Chloride Dihydrate 87.5 mM

200 most important genes:

  gene name fitness t score description  
Atu1308 -5.3 -6.3 aspartate carbamoyl transferase catalytic subunit compare
Atu1030 -5.2 -3.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2728 -4.1 -5.6 beta (1-->2) glucan export ATP-binding protein compare
Atu3763 -4.0 -3.8 hypothetical protein compare
Atu2183 -3.7 -10.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4166 -3.6 -2.1 UDP-glucose 4-epimerase compare
Atu3353 -3.5 -13.1 mannose-1-phosphate guanylyltransferase compare
Atu0017 -3.5 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4617 -3.5 -13.2 dTDP-D-glucose-4,6-dehydratase compare
Atu4618 -3.5 -12.6 dTDP-rhamnose-3,5-epimerase compare
Atu0434 -3.5 -3.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4072 -3.5 -2.6 nodulation protein N compare
Atu3311 -3.5 -16.9 phosphomannose isomerase compare
Atu4614 -3.3 -9.0 glycosyltransferase compare
Atu0486 -3.3 -7.4 dihydroorotate dehydrogenase compare
Atu0298 -3.2 -8.1 orotidine 5 compare
Atu1307 -3.2 -6.5 dihydroorotase compare
Atu1688 -3.2 -3.1 indole-3-glycerol-phosphate synthase compare
Atu0400 -3.2 -6.0 orotate phosphoribosyltransferase compare
Atu2379 -3.2 -11.4 phosphomannomutase compare
Atu4615 -3.1 -11.8 glucose-1-phosphate thymidylyltransferase compare
Atu0971 -3.0 -6.4 two component sensor kinase compare
Atu0399 -3.0 -6.5 dihydroorotase compare
Atu1687 -3.0 -6.7 anthranilate phosphoribosyltransferase compare
Atu4616 -3.0 -3.3 dTDP-4-dehydrorhamnose reductase compare
Atu4613 -2.9 -13.6 glycosyltransferase compare
Atu1891 -2.9 -4.9 cobalamin biosynthesis protein compare
Atu2289 -2.8 -12.3 anthranilate synthase component I and II compare
Atu0784 -2.5 -5.6 hypothetical protein compare
Atu3469 -2.5 -2.9 phosphoglyceromutase compare
Atu0039 -2.4 -2.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu3739 -2.4 -3.3 phosphoglycerate kinase compare
Atu2439 -2.4 -1.8 hypothetical protein compare
Atu4610 -2.4 -12.6 sugar nucleotide epimerase/dehydratase compare
Atu4345 -2.4 -3.8 hypothetical protein compare
Atu1028 -2.3 -1.8 hypothetical protein compare
Atu1446 -2.3 -2.9 two component response regulator compare
Atu2809 -2.3 -7.6 cobalamin biosynthesis protein compare
Atu4470 -2.3 -8.2 iron ABC transporter ATPase compare
Atu1844 -2.3 -2.9 Phosphoribosylformylglycinamidine synthetase compare
Atu8167 -2.3 -12.2 putative transmembrane protein compare
Atu4609 -2.3 -10.5 glycosyltransferase compare
Atu4773 -2.2 -2.4 two component response regulator compare
Atu4469 -2.2 -5.1 iron ABC transporter permease compare
Atu3754 -2.2 -4.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4346 -2.2 -7.5 hypothetical protein compare
Atu4608 -2.1 -11.8 hypothetical protein compare
Atu1705 -2.1 -2.9 SEC-independent protein translocase protein compare
Atu1447 -2.1 -3.3 two component sensor kinase compare
Atu1620 -2.1 -11.1 triosephosphate isomerase compare
Atu0953 -2.1 -1.5 hypothetical protein compare
Atu0189 -2.0 -4.2 ABC transporter, membrane spanning protein (peptide) compare
Atu0331 -2.0 -1.9 sigma-54 modulation protein compare
Atu1110 -2.0 -4.8 cytosol aminopeptidase compare
Atu2798 -2.0 -4.7 precorrin-6y methyltransferase compare
Atu8054 -2.0 -1.2 hypothetical protein compare
Atu1542 -1.9 -6.7 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2799 -1.9 -5.5 precorrin-6x reductase compare
Atu1163 -1.9 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2052 -1.9 -7.9 hypothetical protein compare
Atu4471 -1.9 -10.6 ABC transporter substrate-binding protein compare
Atu0723 -1.9 -2.8 FAD dependent oxidoreductase compare
Atu2802 -1.9 -4.8 precorrin-8X methylmutase compare
Atu0040 -1.9 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1686 -1.9 -8.7 peptidyl-prolyl cis-trans isomerse D compare
Atu2793 -1.9 -6.4 cobyrinic acid a,c-diamide synthase compare
Atu1845 -1.9 -1.7 phosphoribosylformylglycinamidine synthase I compare
Atu2808 -1.9 -6.9 cobyric acid synthase compare
Atu4468 -1.9 -7.8 iron transport ABC transporter permease compare
Atu0031 -1.9 -2.1 PTS system, IIA component compare
Atu1140 -1.9 -5.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2801 -1.8 -4.9 precorrin-2 C20 methyltransferase compare
Atu2205 -1.8 -4.0 transcriptional regulator, MarR family compare
Atu0184 -1.8 -2.8 glucokinase compare
Atu3518 -1.8 -8.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4350 -1.8 -5.7 hypothetical protein compare
Atu1141 -1.8 -8.0 Phosphoribosylglycinamide synthetase compare
Atu4061 -1.8 -3.2 exopolysaccharide production repressor protein compare
Atu1099 -1.8 -6.5 hypothetical protein compare
Atu2805 -1.8 -5.8 cobalamin synthesis protein compare
Atu0041 -1.8 -1.8 glutamine amidotransferase compare
Atu4217 -1.7 -1.8 TetR family transcriptional regulator compare
Atu1075 -1.7 -7.3 amidophosphoribosyltransferase compare
Atu2804 -1.7 -8.3 cobaltochelatase subunit compare
Atu2207 -1.7 -3.5 two component sensor kinase compare
Atu2504 -1.7 -7.2 transcriptional regulator, GntR family compare
Atu0190 -1.7 -7.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4108 -1.7 -9.8 ribonuclease D compare
Atu2807 -1.6 -6.1 cob(I)alamin adenosyltransferase compare
Atu2800 -1.6 -3.7 precorrin-3B C17-methyltransferase compare
Atu1685 -1.6 -1.2 hypothetical protein compare
Atu3794 -1.6 -6.0 FadR family transcriptional regulator compare
Atu2125 -1.6 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu2684 -1.6 -1.6 hypothetical protein compare
Atu0977 -1.6 -3.9 serine protease DO-like protease compare
Atu0912 -1.6 -1.5 Na+/H+ antiporter compare
Atu1774 -1.6 -5.8 ABC transporter, substrate binding protein (peptide) compare
Atu2796 -1.5 -6.0 precorrin-4 C11-methyltransferase compare
Atu2803 -1.5 -4.0 Cobalamin biosynthesis associated protein compare
Atu8096 -1.5 -1.7 hypothetical protein compare
Atu0188 -1.5 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0647 -1.5 -5.0 phosphoribosylamine--glycine ligase compare
Atu4317 -1.4 -2.3 TetR family transcriptional regulator compare
Atu2662 -1.4 -1.4 acetyltransferase compare
Atu0036 -1.4 -3.3 hypothetical protein compare
Atu3517 -1.4 -4.9 acetyltransferase compare
Atu2464 -1.4 -2.8 formyltetrahydrofolate deformylase compare
Atu0690 -1.4 -2.9 hypothetical protein compare
Atu3519 -1.3 -7.2 peptidyl-prolyl cis-trans isomerase compare
Atu1850 -1.3 -2.7 phosphoribosylformylglycinamidine synthetase II compare
Atu3740 -1.3 -5.7 fructose bisphosphate aldolase compare
Atu0769 -1.3 -1.6 protoheme IX farnesyltransferase compare
Atu2383 -1.3 -9.2 hypothetical protein compare
Atu3755 -1.3 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3496 -1.3 -3.9 hypothetical protein compare
Atu2710 -1.3 -7.4 hypothetical protein compare
Atu1739 -1.3 -3.6 permease compare
Atu6098 -1.3 -1.0 transcriptional regulator, HTH family compare
Atu4344 -1.3 -7.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4349 -1.2 -3.4 hypothetical protein compare
Atu0038 -1.2 -3.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2650 -1.2 -6.8 glycerol-3-phosphate dehydrogenase compare
Atu1021 -1.2 -2.0 outer membrane protein compare
Atu4451 -1.2 -6.0 mannitol 2-dehydrogenase compare
Atu0361 -1.2 -3.0 transcriptional regulator compare
Atu2722 -1.2 -4.1 porin compare
Atu2824 -1.2 -3.9 hypothetical protein compare
Atu0711 -1.2 -5.4 potassium uptake protein compare
Atu4348 -1.1 -5.7 VgrG protein compare
Atu1683 -1.1 -2.2 hypothetical protein compare
Atu8056 -1.1 -1.0 hypothetical protein compare
Atu0710 -1.1 -6.7 magnesium/cobalt transport protein compare
Atu3688 -1.1 -3.7 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu2057 -1.1 -2.0 DNA helicase II compare
Atu0578 -1.1 -5.3 FlbT post-transcriptional regulator of flagellin compare
Atu1810 -1.1 -1.1 hypothetical protein compare
Atu0340 -1.1 -1.7 SAM dependent methyltransferase compare
Atu0537 -1.1 -3.4 histidinol dehydrogenase compare
Atu1380 -1.1 -3.2 zinc metallopeptidase compare
Atu3779 -1.1 -5.1 lytic murein transglycosylase compare
Atu1339 -1.1 -3.1 ribonuclease E compare
Atu3486 -1.1 -1.5 DeoR family transcriptional regulator compare
Atu0161 -1.1 -6.4 biopolymer transport protein compare
Atu1801 -1.1 -3.0 hypothetical protein compare
Atu0678 -1.1 -4.2 histidyl-tRNA synthetase compare
Atu0025 -1.1 -2.5 hypothetical protein compare
Atu8082 -1.1 -2.2 hypothetical protein compare
Atu8025 -1.1 -1.5 hypothetical protein compare
Atu2692 -1.1 -3.4 intracellular septation protein compare
Atu4347 -1.0 -5.6 hypothetical protein compare
Atu2115 -1.0 -4.8 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu2768 -1.0 -4.8 hypothetical protein compare
Atu0979 -1.0 -5.1 two component sensor kinase compare
Atu0360 -1.0 -5.3 apolipoprotein N-acyltransferase compare
Atu0435 -1.0 -1.9 tRNA-Gly compare
Atu0978 -1.0 -5.0 two component response regulator compare
Atu0576 -1.0 -4.3 flagellar hook-associated protein compare
Atu4505 -1.0 -5.7 LacI family transcriptional regulator compare
Atu1803 -1.0 -3.0 cold shock protein compare
Atu1445 -1.0 -2.4 two component sensor kinase compare
Atu3663 -1.0 -1.4 hypothetical protein compare
Atu2795 -0.9 -3.7 cobalamin biosynthetic protein compare
Atu2036 -0.9 -5.5 acetolactate synthase III, large subunit compare
Atu1838 -0.9 -3.5 ABC transporter, substrate binding protein (amino acid) compare
Atu1344 -0.9 -1.9 hypothetical protein compare
Atu1619 -0.9 -2.8 protein-export membrane protein SECG compare
Atu1522 -0.9 -5.9 transcriptional regulator, LacI family compare
Atu1588 -0.9 -3.9 homoserine dehydrogenase compare
Atu1359 -0.9 -0.9 dnaK deletion suppressor protein compare
Atu0679 -0.9 -2.7 ATP phosphoribosyltransferase compare
Atu1592 -0.9 -2.9 hypothetical protein compare
Atu3689 -0.9 -5.3 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu2640 -0.9 -3.2 hypothetical protein compare
Atu0097 -0.9 -3.0 hypothetical protein compare
Atu1750 -0.9 -2.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu0931 -0.9 -6.1 penicillin binding protein compare
Atu1076 -0.9 -1.8 colicin V production protein compare
Atu4063 -0.9 -4.9 O-linked GlcNAc transferase compare
Atu2370 -0.9 -4.7 hypothetical protein compare
Atu3691 -0.9 -4.7 iron (III) dicitrate ABC transporter ATPase compare
Atu2730 -0.9 -6.1 beta (1-->2) glucan biosynthesis protein compare
Atu2117 -0.9 -3.8 lytic murein transglycosylase compare
Atu3692 -0.9 -2.8 sigma factor compare
Atu0030 -0.9 -1.2 phosphocarrier protein HPr compare
Atu0421 -0.9 -1.1 ABC transporter, membrane spanning protein compare
Atu0999 -0.8 -4.1 magnesium transport protein compare
Atu2058 -0.8 -2.7 hypothetical protein compare
Atu4075 -0.8 -3.7 glycogen synthase compare
Atu0046 -0.8 -4.9 hypothetical protein compare
Atu2187 -0.8 -1.9 transcriptional regulator, ArsR family compare
Atu0162 -0.8 -4.3 biopolymer transport protein compare
Atu4674 -0.8 -3.9 GntR family transcriptional regulator compare
Atu0554 -0.8 -3.1 flagellar basal-body rod protein compare
Atu3759 -0.8 -1.1 hypothetical protein compare
Atu0062 -0.8 -4.3 transcriptional regulator, ROK family compare
Atu0050 -0.8 -3.2 two component response regulator compare
Atu3727 -0.8 -2.1 hypothetical protein compare
Atu4711 -0.8 -2.8 two component sensor kinase compare
Atu2184 -0.8 -2.5 transcriptional regulator, AsnC family compare
Atu3706 -0.7 -3.4 D-3-phosphoglycerate dehydrogenase compare


Specific Phenotypes

For 17 genes in this experiment

For stress Calcium chloride dihydrate in Agrobacterium fabrum C58

For stress Calcium chloride dihydrate across organisms