| | gene | name | fitness | t score | description | |
|---|
| b0630 | lipB | -3.7 | -2.5 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3414 | gntY | -3.7 | -7.8 | predicted gluconate transport associated protein (NCBI) | compare |
| b0200 | gmhB | -3.4 | -2.3 | hypothetical protein (NCBI) | compare |
| b2894 | xerD | -3.2 | -3.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3493 | pitA | -3.2 | -11.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b0439 | lon | -3.0 | -7.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3290 | trkA | -3.0 | -3.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0053 | surA | -2.9 | -7.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3863 | polA | -2.8 | -1.9 | DNA polymerase I (NCBI) | compare |
| b0683 | fur | -2.7 | -3.2 | ferric uptake regulator (NCBI) | compare |
| b2935 | tktA | -2.7 | -5.0 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3052 | rfaE | -2.5 | -7.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3621 | rfaC | -2.5 | -7.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3390 | aroK | -2.5 | -3.6 | shikimate kinase I (NCBI) | compare |
| b2699 | recA | -2.5 | -3.6 | recombinase A (NCBI) | compare |
| b2330 | yfcB | -2.4 | -4.2 | putative adenine-specific methylase (VIMSS) | compare |
| b1290 | sapF | -2.3 | -3.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2820 | recB | -2.3 | -4.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1291 | sapD | -2.3 | -3.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1175 | minD | -2.3 | -9.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3619 | rfaD | -2.2 | -5.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2436 | hemF | -2.2 | -5.1 | coproporphyrinogen III oxidase (NCBI) | compare |
| b0114 | aceE | -2.2 | -2.9 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4172 | hfq | -2.2 | -2.8 | RNA-binding protein Hfq (NCBI) | compare |
| b3463 | ftsE | -2.2 | -6.1 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3725 | pstB | -2.1 | -4.4 | phosphate transporter subunit (NCBI) | compare |
| b2688 | gshA | -2.1 | -9.8 | glutamate--cysteine ligase (NCBI) | compare |
| b1236 | galU | -2.1 | -7.8 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3169 | nusA | -2.0 | -2.7 | transcription elongation factor NusA (NCBI) | compare |
| b3842 | rfaH | -2.0 | -7.1 | transcriptional activator RfaH (NCBI) | compare |
| b0890 | ftsK | -2.0 | -9.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1712 | ihfA | -1.9 | -4.5 | integration host factor subunit alpha (NCBI) | compare |
| b3839 | tatC | -1.9 | -10.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0688 | pgm | -1.9 | -5.1 | phosphoglucomutase (NCBI) | compare |
| b3386 | rpe | -1.8 | -1.7 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3811 | xerC | -1.8 | -4.5 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3916 | pfkA | -1.8 | -5.4 | 6-phosphofructokinase (NCBI) | compare |
| b1861 | ruvA | -1.8 | -2.3 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3630 | rfaP | -1.8 | -11.9 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3462 | ftsX | -1.7 | -7.1 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1109 | ndh | -1.7 | -5.6 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b0222 | lpcA | -1.7 | -3.5 | phosphoheptose isomerase (NCBI) | compare |
| b2947 | gshB | -1.7 | -6.2 | glutathione synthetase (NCBI) | compare |
| b3426 | glpD | -1.7 | -8.1 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b3631 | rfaG | -1.6 | -13.5 | glucosyltransferase I (NCBI) | compare |
| b3620 | rfaF | -1.6 | -5.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3162 | deaD | -1.6 | -6.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3636 | rpmG | -1.6 | -2.7 | 50S ribosomal protein L33 (NCBI) | compare |
| b3613 | yibP | -1.6 | -6.8 | putative membrane protein (VIMSS) | compare |
| b4239 | treC | -1.6 | -6.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b1292 | sapC | -1.6 | -3.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4375 | prfC | -1.5 | -7.9 | peptide chain release factor 3 (NCBI) | compare |
| b0049 | apaH | -1.5 | -5.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b3961 | oxyR | -1.5 | -10.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1293 | sapB | -1.5 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1176 | minC | -1.5 | -5.0 | septum formation inhibitor (NCBI) | compare |
| b0912 | ihfB | -1.4 | -4.1 | integration host factor subunit beta (NCBI) | compare |
| b3778 | rep | -1.4 | -8.7 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2392 | mntH | -1.4 | -7.6 | manganese transport protein MntH (NCBI) | compare |
| b4155 | yjeA | -1.3 | -1.9 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b2620 | smpB | -1.3 | -3.1 | SsrA-binding protein (NCBI) | compare |
| b1095 | fabF | -1.3 | -7.6 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3979 | thrT | -1.3 | -1.5 | tRNA-Thr (NCBI) | compare |
| b2822 | recC | -1.3 | -5.2 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b3742 | mioC | -1.3 | -5.4 | flavodoxin (NCBI) | compare |
| b2567 | rnc | -1.3 | -2.1 | ribonuclease III (NCBI) | compare |
| b2297 | pta | -1.3 | -2.1 | phosphate acetyltransferase (NCBI) | compare |
| b0428 | cyoE | -1.3 | -6.6 | protoheme IX farnesyltransferase (NCBI) | compare |
| b3405 | ompR | -1.3 | -4.9 | osmolarity response regulator (NCBI) | compare |
| b0149 | mrcB | -1.3 | -9.2 | penicillin-binding protein 1b (NCBI) | compare |
| b4585 | sroB | -1.2 | -1.7 | Novel sRNA, function unknown (RefSeq) | compare |
| b3807 | cyaY | -1.2 | -6.3 | frataxin-like protein (NCBI) | compare |
| b2814 | metZ | -1.2 | -2.0 | tRNA-Met (NCBI) | compare |
| b4407 | thiS | -1.2 | -2.0 | sulfur carrier protein ThiS (NCBI) | compare |
| b1855 | lpxM | -1.1 | -3.6 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0118 | acnB | -1.1 | -3.6 | aconitate hydratase (NCBI) | compare |
| b3838 | tatB | -1.1 | -5.0 | sec-independent translocase (NCBI) | compare |
| b3632 | rfaQ | -1.1 | -10.0 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2906 | visC | -1.1 | -5.5 | hypothetical protein (NCBI) | compare |
| b0432 | cyoA | -1.0 | -6.6 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b0767 | ybhE | -1.0 | -4.3 | 6-phosphogluconolactonase (NCBI) | compare |
| b0880 | cspD | -1.0 | -2.3 | cold shock protein homolog (NCBI) | compare |
| b1860 | ruvB | -1.0 | -1.3 | Holliday junction DNA helicase B (NCBI) | compare |
| b3649 | rpoZ | -1.0 | -3.3 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3871 | bipA | -1.0 | -7.4 | GTP-binding protein (NCBI) | compare |
| b3849 | trkH | -1.0 | -7.5 | potassium transporter (NCBI) | compare |
| b3164 | pnp | -1.0 | -3.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0014 | dnaK | -1.0 | -2.1 | molecular chaperone DnaK (NCBI) | compare |
| b0356 | frmA | -1.0 | -5.6 | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) | compare |
| b1818 | manY | -1.0 | -2.5 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1863 | ruvC | -1.0 | -3.3 | Holliday junction resolvase (NCBI) | compare |
| b0431 | cyoB | -1.0 | -6.5 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3009 | yghB | -1.0 | -4.4 | conserved inner membrane protein (NCBI) | compare |
| b2528 | iscA | -0.9 | -1.8 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1105 | ycfM | -0.9 | -2.8 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1693 | aroD | -0.9 | -5.4 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3741 | gidA | -0.9 | -5.9 | glucose-inhibited division protein A (NCBI) | compare |
| b4577 | sgrS | -0.9 | -1.7 | small antisense RNA (NCBI) | compare |
| b3341 | rpsG | -0.9 | -1.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b4546 | ypeB | -0.9 | -1.5 | hypothetical protein (NCBI) | compare |
| b3237 | argR | -0.9 | -4.2 | arginine repressor (NCBI) | compare |
| b3261 | fis | -0.9 | -2.6 | DNA-binding protein Fis (NCBI) | compare |
| b4685 | yrbN | -0.9 | -2.0 | expressed protein (RefSeq) | compare |
| b3609 | secB | -0.9 | -3.1 | export protein SecB (NCBI) | compare |
| b3017 | sufI | -0.9 | -6.4 | repressor protein for FtsI (NCBI) | compare |
| b3935 | priA | -0.9 | -1.7 | primosome assembly protein PriA (NCBI) | compare |
| b3095 | yqjA | -0.9 | -5.2 | conserved inner membrane protein (NCBI) | compare |
| b2784 | relA | -0.9 | -5.8 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b3933 | ftsN | -0.9 | -6.1 | essential cell division protein (NCBI) | compare |
| b2113 | mrp | -0.9 | -3.9 | putative ATPase (VIMSS) | compare |
| b3761 | trpT | -0.9 | -1.7 | tRNA-Trp (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b2058 | wcaB | -0.8 | -1.1 | predicted acyl transferase (NCBI) | compare |
| b0018 | mokC | -0.8 | -1.2 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b0161 | degP | -0.8 | -5.1 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b4177 | purA | -0.8 | -3.1 | adenylosuccinate synthetase (NCBI) | compare |
| b2314 | dedD | -0.8 | -2.9 | putative lipoprotein (VIMSS) | compare |
| b0677 | nagA | -0.8 | -4.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1493 | gadB | -0.8 | -1.7 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1681 | sufD | -0.8 | -4.3 | component of SufBCD complex (NCBI) | compare |
| b3465 | yhhF | -0.8 | -4.3 | predicted methyltransferase (NCBI) | compare |
| b1550 | b1550 | -0.8 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0726 | sucA | -0.8 | -2.9 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1412 | azoR | -0.8 | -1.6 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b3387 | dam | -0.8 | -5.8 | DNA adenine methylase (NCBI) | compare |
| b3204 | ptsN | -0.8 | -3.2 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1305 | pspB | -0.8 | -2.4 | phage shock protein B (NCBI) | compare |
| b4527 | b1354 | -0.7 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b3706 | trmE | -0.7 | -4.3 | tRNA modification GTPase (NCBI) | compare |
| b2435 | amiA | -0.7 | -2.7 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b2114 | metG | -0.7 | -1.6 | methionyl-tRNA synthetase (NCBI) | compare |
| b3107 | yhaL | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2278 | nuoL | -0.7 | -5.1 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1426 | ydcH | -0.7 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0430 | cyoC | -0.7 | -2.6 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b2576 | srmB | -0.7 | -2.7 | ATP-dependent RNA helicase (NCBI) | compare |
| b0143 | pcnB | -0.7 | -4.2 | poly(A) polymerase I (VIMSS) | compare |
| b0429 | cyoD | -0.7 | -2.8 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b3627 | rfaI | -0.7 | -6.0 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b2277 | nuoM | -0.7 | -3.8 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0167 | glnD | -0.7 | -2.8 | PII uridylyl-transferase (NCBI) | compare |
| b3398 | yrfF | -0.7 | -1.4 | predicted inner membrane protein (NCBI) | compare |
| b3027 | ygiZ | -0.7 | -2.3 | conserved inner membrane protein (NCBI) | compare |
| b0817 | mntR | -0.7 | -2.9 | DNA-binding transcriptional regulator of mntH (NCBI) | compare |
| b2340 | sixA | -0.7 | -2.8 | phosphohistidine phosphatase (NCBI) | compare |
| b0888 | trxB | -0.7 | -2.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2280 | nuoJ | -0.7 | -3.3 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2945 | endA | -0.7 | -2.9 | DNA-specific endonuclease I (NCBI) | compare |
| b1644 | b1644 | -0.7 | -2.2 | putative membrane protein (VIMSS) | compare |
| b3803 | hemX | -0.7 | -4.8 | predicted uroporphyrinogen III methylase (NCBI) | compare |
| b2450 | yffS | -0.7 | -1.4 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1954 | dsrA | -0.6 | -1.8 | regulatory antisense RNA (NCBI) | compare |
| b3806 | cyaA | -0.6 | -3.5 | adenylate cyclase (NCBI) | compare |
| b2811 | ygdK | -0.6 | -3.1 | predicted Fe-S metabolism protein (NCBI) | compare |
| b1664 | ydhQ | -0.6 | -3.6 | hypothetical protein (NCBI) | compare |
| b0464 | acrR | -0.6 | -5.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1486 | ddpB | -0.6 | -1.8 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b1235 | rssB | -0.6 | -4.1 | response regulator of RpoS (NCBI) | compare |
| b0209 | yafD | -0.6 | -3.1 | hypothetical protein (NCBI) | compare |
| b1187 | fadR | -0.6 | -3.0 | fatty acid metabolism regulator (NCBI) | compare |
| b2431 | b2431 | -0.6 | -4.1 | orf, hypothetical protein (VIMSS) | compare |
| b0427 | yajR | -0.6 | -3.9 | putative transport protein (VIMSS) | compare |
| b4648 | ysaC | -0.6 | -2.0 | no description | compare |
| b3813 | uvrD | -0.6 | -5.3 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b0226 | dinJ | -0.6 | -1.5 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b4631 | ykgQ | -0.6 | -1.3 | no description | compare |
| b0720 | gltA | -0.6 | -2.5 | citrate synthase (NCBI) | compare |
| b1918 | yecS | -0.6 | -2.2 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2895 | fldB | -0.6 | -2.1 | flavodoxin 2 (NCBI) | compare |
| b3628 | rfaB | -0.6 | -5.2 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b0082 | mraW | -0.6 | -2.5 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4402 | yjjY | -0.6 | -1.1 | hypothetical protein (NCBI) | compare |
| b2287 | nuoB | -0.6 | -2.3 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1671 | ydhX | -0.6 | -1.6 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2531 | iscR | -0.6 | -0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1253 | yciA | -0.6 | -1.9 | predicted hydrolase (NCBI) | compare |
| b2285 | nuoE | -0.6 | -1.4 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1160 | elbA | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b4529 | ydbJ | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b4222 | ytfP | -0.6 | -2.7 | hypothetical protein (NCBI) | compare |
| b2447 | yffP | -0.6 | -2.3 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0812 | dps | -0.6 | -2.9 | DNA protection during starvation conditions (NCBI) | compare |
| b1097 | yceG | -0.6 | -2.9 | predicted aminodeoxychorismate lyase (NCBI) | compare |
| b1984 | asnW | -0.6 | -0.8 | tRNA-Asn (NCBI) | compare |
| b4202 | rpsR | -0.6 | -1.1 | 30S ribosomal protein S18 (NCBI) | compare |
| b2419 | yfeK | -0.6 | -1.5 | hypothetical protein (NCBI) | compare |
| b1658 | purR | -0.6 | -2.8 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2318 | truA | -0.6 | -2.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0843 | ybjH | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b3438 | gntR | -0.6 | -2.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1380 | ldhA | -0.6 | -1.4 | D-lactate dehydrogenase (NCBI) | compare |
| b3652 | recG | -0.6 | -4.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b4025 | pgi | -0.6 | -3.9 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3293 | yhdN | -0.5 | -2.4 | hypothetical protein (NCBI) | compare |
| b0957 | ompA | -0.5 | -2.0 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b0965 | b0965 | -0.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3181 | greA | -0.5 | -2.6 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b0418 | pgpA | -0.5 | -2.6 | phosphatidylglycerophosphatase A (NCBI) | compare |
| b2284 | nuoF | -0.5 | -2.4 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0955 | ycbZ | -0.5 | -3.6 | predicted peptidase (NCBI) | compare |