Experiment set4IT018 for Escherichia coli BW25113

Compare to:

LB with 3-methyl-2-butenol 0.625 vol%

Group: stress
Media: LB + 3-methyl-2-butenol (0.625 vol%)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Mitch on 3/15/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 3 genes in this experiment

For stress 3-methyl-2-butenol in Escherichia coli BW25113

For stress 3-methyl-2-butenol across organisms

SEED Subsystems

Subsystem #Specific
Experimental tye 1
Heme and Siroheme Biosynthesis 1
Transport of Manganese 1
YeiH 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
heme b biosynthesis V (aerobic) 4 4 1
heme b biosynthesis I (aerobic) 4 4 1
superpathway of heme b biosynthesis from uroporphyrinogen-III 6 6 1
superpathway of heme b biosynthesis from glycine 8 7 1
3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent) 9 3 1
3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent) 9 3 1
superpathway of heme b biosynthesis from glutamate 10 10 1