Experiment set4IT016 for Agrobacterium fabrum C58

Compare to:

R2A with Aluminum chloride hydrate 0.3 mM

200 most important genes:

  gene name fitness t score description  
Atu1307 -3.6 -8.0 dihydroorotase compare
Atu1163 -3.6 -3.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0017 -3.0 -2.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2684 -2.8 -2.2 hypothetical protein compare
Atu0434 -2.7 -2.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1687 -2.7 -7.3 anthranilate phosphoribosyltransferase compare
Atu2289 -2.6 -10.9 anthranilate synthase component I and II compare
Atu1844 -2.6 -4.7 Phosphoribosylformylglycinamidine synthetase compare
Atu0400 -2.3 -5.3 orotate phosphoribosyltransferase compare
Atu1308 -2.2 -5.3 aspartate carbamoyl transferase catalytic subunit compare
Atu3469 -2.2 -3.2 phosphoglyceromutase compare
Atu0486 -2.2 -3.4 dihydroorotate dehydrogenase compare
Atu0399 -2.1 -5.2 dihydroorotase compare
Atu1688 -1.9 -4.5 indole-3-glycerol-phosphate synthase compare
Atu1030 -1.9 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1891 -1.8 -3.8 cobalamin biosynthesis protein compare
Atu0346 -1.8 -3.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3754 -1.8 -5.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0298 -1.8 -7.3 orotidine 5 compare
Atu1028 -1.7 -3.4 hypothetical protein compare
Atu0103 -1.6 -7.5 penicillin-binding protein compare
Atu2125 -1.6 -2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu2728 -1.5 -4.5 beta (1-->2) glucan export ATP-binding protein compare
Atu0031 -1.4 -1.9 PTS system, IIA component compare
Atu0647 -1.4 -5.1 phosphoribosylamine--glycine ligase compare
Atu8082 -1.4 -3.1 hypothetical protein compare
Atu1686 -1.4 -7.4 peptidyl-prolyl cis-trans isomerse D compare
Atu0886 -1.3 -1.5 hypothetical protein compare
Atu2710 -1.3 -5.6 hypothetical protein compare
Atu0723 -1.3 -1.7 FAD dependent oxidoreductase compare
Atu1542 -1.3 -5.2 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0184 -1.2 -2.0 glucokinase compare
Atu2802 -1.2 -4.6 precorrin-8X methylmutase compare
Atu0925 -1.2 -3.6 hypothetical protein compare
Atu2040 -1.2 -3.6 phosphoserine phosphatase compare
Atu2801 -1.2 -3.3 precorrin-2 C20 methyltransferase compare
Atu2807 -1.2 -5.0 cob(I)alamin adenosyltransferase compare
Atu5513 -1.2 -1.9 cold shock protein compare
Atu2798 -1.2 -4.4 precorrin-6y methyltransferase compare
Atu5540 -1.2 -0.9 hypothetical protein compare
Atu4773 -1.1 -1.4 two component response regulator compare
Atu3593 -1.1 -7.0 hypothetical protein compare
Atu2207 -1.1 -3.6 two component sensor kinase compare
Atu0971 -1.1 -4.3 two component sensor kinase compare
Atu4616 -1.1 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu2809 -1.1 -5.7 cobalamin biosynthesis protein compare
Atu5427 -1.1 -2.1 hypothetical protein compare
Atu0322 -1.1 -4.0 enoyl CoA hydratase compare
Atu5173 -1.1 -1.8 dehydrogenase compare
Atu2800 -1.1 -2.6 precorrin-3B C17-methyltransferase compare
Atu0894 -1.0 -2.7 ABC transporter, membrane spanning protein compare
Atu6153 -1.0 -2.1 conserved hypothetical protein compare
Atu2804 -1.0 -6.8 cobaltochelatase subunit compare
Atu0977 -1.0 -3.5 serine protease DO-like protease compare
Atu2808 -1.0 -4.6 cobyric acid synthase compare
Atu3755 -1.0 -2.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2057 -1.0 -1.7 DNA helicase II compare
Atu1141 -1.0 -3.1 Phosphoribosylglycinamide synthetase compare
Atu1075 -1.0 -3.3 amidophosphoribosyltransferase compare
Atu3511 -0.9 -2.8 glutaredoxin compare
Atu4108 -0.9 -4.2 ribonuclease D compare
Atu1845 -0.9 -2.5 phosphoribosylformylglycinamidine synthase I compare
Atu4317 -0.9 -1.4 TetR family transcriptional regulator compare
Atu1774 -0.9 -5.5 ABC transporter, substrate binding protein (peptide) compare
Atu1364 -0.9 -3.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1446 -0.9 -1.3 two component response regulator compare
Atu0086 -0.9 -0.7 ribosome-binding factor A compare
Atu0188 -0.9 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0598 -0.9 -4.7 phosphogluconate dehydratase compare
Atu2793 -0.9 -3.3 cobyrinic acid a,c-diamide synthase compare
Atu0272 -0.9 -2.7 transcriptional regulator, MarR family compare
Atu0153 -0.9 -4.0 transcriptional regulator, Fur family compare
Atu1223 -0.9 -0.9 hypothetical protein compare
Atu2796 -0.9 -3.4 precorrin-4 C11-methyltransferase compare
Atu0190 -0.9 -4.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1140 -0.9 -2.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3032 -0.8 -1.9 hypothetical protein compare
Atu4889 -0.8 -4.1 hypothetical protein compare
Atu3461 -0.8 -1.5 GntR family transcriptional regulator compare
Atu0938 -0.8 -1.8 transcriptional regulator, MerR family compare
Atu1355 -0.8 -4.6 hypothetical protein compare
Atu4896 -0.8 -2.0 acetyltransferase compare
Atu2795 -0.8 -3.7 cobalamin biosynthetic protein compare
Atu2238 -0.8 -3.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu6114 -0.8 -2.3 hypothetical protein compare
Atu3031 -0.8 -1.2 hypothetical protein compare
Atu2239 -0.8 -2.6 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4890 -0.8 -1.3 IS426 transposase compare
Atu8191 -0.8 -1.4 hypothetical protein compare
Atu3045 -0.8 -2.1 hypothetical protein compare
Atu3634 -0.8 -2.1 penicillin-binding protein dacf precursor compare
Atu2067 -0.8 -0.9 hypothetical protein compare
Atu2554 -0.8 -1.4 lysyl-tRNA synthetase compare
Atu0026 -0.7 -0.8 hypothetical protein compare
Atu1850 -0.7 -1.5 phosphoribosylformylglycinamidine synthetase II compare
Atu2790 -0.7 -1.3 3-isopropylmalate dehydratase, small subunit compare
Atu0784 -0.7 -2.0 hypothetical protein compare
Atu1714 -0.7 -1.1 exonuclease III compare
Atu0943 -0.7 -1.5 hypothetical protein compare
Atu4882 -0.7 -2.3 hypothetical protein compare
Atu0687 -0.7 -1.8 hypothetical protein compare
Atu2805 -0.7 -3.5 cobalamin synthesis protein compare
Atu3727 -0.7 -2.2 hypothetical protein compare
Atu0572 -0.7 -1.8 hypothetical protein compare
Atu5088 -0.7 -1.9 hypothetical protein compare
Atu3036 -0.7 -1.8 dipeptide ABC transporter permease compare
Atu2803 -0.7 -2.2 Cobalamin biosynthesis associated protein compare
Atu4893 -0.7 -3.4 hypothetical protein compare
Atu0421 -0.7 -1.0 ABC transporter, membrane spanning protein compare
Atu4841 -0.7 -3.6 DeoR family transcriptional regulator compare
Atu2692 -0.7 -2.0 intracellular septation protein compare
Atu0189 -0.7 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu0025 -0.7 -1.3 hypothetical protein compare
Atu1327 -0.7 -2.1 NADH-ubiquinone oxidoreductase compare
Atu1110 -0.7 -2.2 cytosol aminopeptidase compare
Atu2267 -0.7 -2.2 hypothetical protein compare
Atu2484 -0.7 -1.2 hypothetical protein compare
Atu1447 -0.7 -2.2 two component sensor kinase compare
Atu2799 -0.7 -2.3 precorrin-6x reductase compare
Atu3017 -0.7 -1.1 phosphoglyceromutase compare
Atu4873 -0.7 -2.4 TetR family transcriptional regulator compare
Atu4843 -0.7 -4.9 sugar ABC transporter ATPase compare
Atu6039 -0.7 -1.9 conjugal transfer protein compare
Atu0972 -0.6 -2.9 lipA protein compare
Atu4864 -0.6 -3.8 MarR family transcriptional regulator compare
Atu8126 -0.6 -2.7 putative phage tail protein I compare
Atu3020 -0.6 -3.5 GntR family transcriptional regulator compare
Atu3054 -0.6 -5.0 hypothetical protein compare
Atu3707 -0.6 -2.1 phosphoserine aminotransferase compare
Atu0767 -0.6 -2.8 cytochrome c oxidase subunit II compare
Atu0039 -0.6 -0.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu4166 -0.6 -1.4 UDP-glucose 4-epimerase compare
Atu8029 -0.6 -1.0 hypothetical protein compare
Atu4075 -0.6 -2.6 glycogen synthase compare
Atu3016 -0.6 -2.8 phosphoglyceromutase compare
Atu3022 -0.6 -4.3 sugar ABC transporter permease compare
Atu1323 -0.6 -1.4 hypothetical protein compare
Atu0401 -0.6 -3.1 fructokinase compare
Atu3706 -0.6 -3.3 D-3-phosphoglycerate dehydrogenase compare
Atu0201 -0.6 -1.2 hypothetical protein compare
Atu0149 -0.6 -2.0 enoyl-(acyl-carrier-protein) reductase compare
Atu0457 -0.6 -3.6 hypothetical protein compare
Atu0922 -0.6 -2.0 hypothetical protein compare
Atu2650 -0.6 -3.5 glycerol-3-phosphate dehydrogenase compare
Atu0495 -0.6 -2.5 hypothetical protein compare
Atu3739 -0.6 -1.1 phosphoglycerate kinase compare
Atu6045 -0.6 -0.9 replication protein C compare
Atu0535 -0.6 -2.5 hypothetical protein compare
Atu4364 -0.6 -2.6 LacI family transcriptional regulator compare
Atu4897 -0.6 -1.1 hypothetical protein compare
Atu0422 -0.6 -1.0 ABC transporter, membrane spanning protein compare
Atu4617 -0.6 -4.1 dTDP-D-glucose-4,6-dehydratase compare
Atu1422 -0.6 -2.9 transcriptional regulator, MarR family compare
Atu2464 -0.6 -1.7 formyltetrahydrofolate deformylase compare
Atu0769 -0.6 -0.5 protoheme IX farnesyltransferase compare
Atu0956 -0.5 -1.9 phage prohead protease compare
Atu3063 -0.5 -3.1 ABC transporter permease compare
Atu1782 -0.5 -1.7 hypothetical protein compare
Atu0765 -0.5 -3.6 TldD compare
Atu4842 -0.5 -3.7 sugar ABC transporter substrate-binding protein compare
Atu5045 -0.5 -0.5 hypothetical protein compare
Atu1189 -0.5 -1.9 hypothetical protein compare
Atu1154 -0.5 -1.5 hypothetical protein compare
Atu3051 -0.5 -4.2 agropine synthesis reductase compare
Atu4847 -0.5 -3.6 ribokinase compare
Atu4866 -0.5 -3.6 hypothetical protein compare
Atu3485 -0.5 -3.1 short chain dehydrogenase compare
Atu4567 -0.5 -2.2 ROK family transcriptional regulator compare
Atu4405 -0.5 -1.6 periplasmic nitrate reductase NapE compare
Atu1550 -0.5 -1.8 polypeptide deformylase compare
Atu1469 -0.5 -1.5 hypothetical protein compare
Atu8133 -0.5 -1.1 hypothetical protein compare
Atu5075 -0.5 -2.8 GntR family transcriptional regulator compare
Atu1725 -0.5 -1.9 hypothetical protein compare
Atu2036 -0.5 -3.7 acetolactate synthase III, large subunit compare
Atu2605 -0.5 -1.5 hypothetical protein compare
Atu4869 -0.5 -1.6 hypothetical protein compare
Atu2548 -0.5 -3.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0771 -0.5 -3.3 cytochrome c oxidase subunit III compare
Atu1285 -0.5 -2.3 metal dependent hydrolase compare
Atu6165 -0.5 -0.6 hypothetical protein compare
Atu2193 -0.5 -0.6 hypothetical protein compare
Atu3486 -0.5 -1.0 DeoR family transcriptional regulator compare
Atu4854 -0.5 -2.2 hypothetical protein compare
Atu1699 -0.5 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu8144 -0.5 -2.0 hypothetical protein compare
Atu4892 -0.5 -3.6 hypothetical protein compare
Atu3122 -0.5 -1.2 cold shock protein compare
Atu3014 -0.5 -1.4 hypothetical protein compare
Atu0101 -0.5 -1.6 cytochrome c compare
Atu8138 -0.5 -0.9 hypothetical protein compare
Atu2343 -0.5 -2.1 acetyltransferase compare
Atu4822 -0.5 -2.9 acyl-CoA synthetase compare
Atu3299 -0.5 -1.0 hypothetical protein compare
Atu3668 -0.5 -1.6 siderophore biosynthesis protein compare
Atu2237 -0.5 -1.8 cytochrome c1 compare
Atu4214 -0.5 -1.3 cold shock protein compare
Atu4894 -0.5 -3.2 transposase compare
Atu1739 -0.5 -2.0 permease compare
Atu0036 -0.5 -0.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Aluminum chloride hydrate across organisms