Experiment set4IT012 for Agrobacterium fabrum C58

Compare to:

R2A with Cobalt chloride hexahydrate 0.02 mM

200 most important genes:

  gene name fitness t score description  
Atu1470 -3.7 -2.0 Camphor resistance protein compare
Atu1687 -3.6 -6.4 anthranilate phosphoribosyltransferase compare
Atu1307 -3.3 -7.5 dihydroorotase compare
Atu0017 -2.9 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1308 -2.9 -5.5 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -2.8 -4.2 orotate phosphoribosyltransferase compare
Atu0040 -2.8 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0953 -2.7 -1.9 hypothetical protein compare
Atu1688 -2.6 -4.3 indole-3-glycerol-phosphate synthase compare
Atu1844 -2.5 -2.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1446 -2.4 -2.9 two component response regulator compare
Atu0039 -2.3 -3.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu2368 -2.3 -1.9 hypothetical protein compare
Atu0434 -2.2 -2.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2289 -2.2 -10.6 anthranilate synthase component I and II compare
Atu0399 -2.1 -5.6 dihydroorotase compare
Atu3755 -2.0 -4.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2554 -1.9 -2.6 lysyl-tRNA synthetase compare
Atu1874 -1.9 -2.5 RecA protein compare
Atu2017 -1.9 -1.5 hypothetical protein compare
Atu0647 -1.9 -5.3 phosphoribosylamine--glycine ligase compare
Atu1075 -1.8 -4.8 amidophosphoribosyltransferase compare
Atu1685 -1.7 -1.2 hypothetical protein compare
Atu6098 -1.6 -0.9 transcriptional regulator, HTH family compare
Atu2662 -1.6 -1.7 acetyltransferase compare
Atu4217 -1.6 -1.5 TetR family transcriptional regulator compare
Atu3121 -1.5 -1.6 cold shock protein compare
Atu2710 -1.5 -6.9 hypothetical protein compare
Atu3754 -1.5 -5.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0298 -1.5 -4.6 orotidine 5 compare
Atu0346 -1.5 -2.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2684 -1.5 -1.1 hypothetical protein compare
Atu2798 -1.5 -3.8 precorrin-6y methyltransferase compare
Atu2728 -1.5 -2.8 beta (1-->2) glucan export ATP-binding protein compare
Atu2057 -1.5 -2.1 DNA helicase II compare
Atu0486 -1.4 -3.4 dihydroorotate dehydrogenase compare
Atu1686 -1.4 -6.7 peptidyl-prolyl cis-trans isomerse D compare
Atu3707 -1.4 -2.3 phosphoserine aminotransferase compare
Atu2800 -1.4 -2.2 precorrin-3B C17-methyltransferase compare
Atu0184 -1.3 -2.2 glucokinase compare
Atu0690 -1.3 -2.2 hypothetical protein compare
Atu1140 -1.3 -2.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu8082 -1.2 -2.5 hypothetical protein compare
Atu3120 -1.2 -1.3 hypothetical protein compare
Atu0976 -1.2 -2.3 cycL protein compare
Atu0189 -1.2 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1588 -1.2 -5.5 homoserine dehydrogenase compare
Atu2464 -1.2 -2.5 formyltetrahydrofolate deformylase compare
Atu4161 -1.2 -1.9 hypothetical protein compare
Atu0435 -1.2 -2.1 tRNA-Gly compare
Atu0103 -1.2 -5.2 penicillin-binding protein compare
Atu0422 -1.1 -1.3 ABC transporter, membrane spanning protein compare
Atu4616 -1.1 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu0769 -1.1 -1.7 protoheme IX farnesyltransferase compare
Atu0190 -1.1 -4.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0141 -1.1 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu0115 -1.1 -0.9 hypothetical protein compare
Atu4075 -1.1 -3.3 glycogen synthase compare
Atu1774 -1.1 -5.1 ABC transporter, substrate binding protein (peptide) compare
Atu3469 -1.0 -1.4 phosphoglyceromutase compare
Atu4882 -1.0 -2.0 hypothetical protein compare
Atu2803 -1.0 -2.4 Cobalamin biosynthesis associated protein compare
Atu2207 -1.0 -2.6 two component sensor kinase compare
Atu1141 -1.0 -5.0 Phosphoribosylglycinamide synthetase compare
Atu1845 -1.0 -2.0 phosphoribosylformylglycinamidine synthase I compare
Atu2807 -1.0 -4.4 cob(I)alamin adenosyltransferase compare
Atu3727 -1.0 -2.2 hypothetical protein compare
Atu4840 -1.0 -3.9 hypothetical protein compare
Atu1302 -0.9 -2.2 hypothetical protein compare
Atu1850 -0.9 -2.4 phosphoribosylformylglycinamidine synthetase II compare
Atu0566 -0.9 -1.7 hypothetical protein compare
Atu1364 -0.9 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0977 -0.9 -3.2 serine protease DO-like protease compare
Atu3008 -0.9 -1.1 hypothetical protein compare
Atu0598 -0.9 -3.7 phosphogluconate dehydratase compare
Atu1891 -0.9 -2.5 cobalamin biosynthesis protein compare
Atu0956 -0.9 -2.1 phage prohead protease compare
Atu1542 -0.9 -2.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1354 -0.9 -0.9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1463 -0.9 -2.8 glycine cleavage system component H compare
Atu2555 -0.9 -2.3 L-lysine 2,3-aminomutase compare
Atu3018 -0.8 -3.3 hypothetical protein compare
Atu0421 -0.8 -1.1 ABC transporter, membrane spanning protein compare
Atu5540 -0.8 -0.7 hypothetical protein compare
Atu3763 -0.8 -1.7 hypothetical protein compare
Atu2802 -0.8 -4.0 precorrin-8X methylmutase compare
Atu1739 -0.8 -3.0 permease compare
Atu3026 -0.8 -3.4 short chain dehydrogenase compare
Atu4514 -0.8 -3.6 RpiR family transcriptional regulator compare
Atu0972 -0.8 -4.6 lipA protein compare
Atu0119 -0.8 -1.0 hypothetical protein compare
Atu5164 -0.8 -0.6 type IV secretion protein AvhB3 compare
Atu3183 -0.8 -0.7 hypothetical protein compare
Atu2484 -0.8 -1.2 hypothetical protein compare
Atu2249 -0.8 -0.7 hypothetical protein compare
Atu3017 -0.8 -1.2 phosphoglyceromutase compare
Atu0842 -0.8 -1.1 hypothetical protein compare
Atu6045 -0.8 -1.0 replication protein C compare
Atu1589 -0.8 -3.3 aminotransferase, class I compare
Atu4418 -0.8 -1.9 glutaryl-CoA dehydrogenase compare
Atu0025 -0.7 -1.7 hypothetical protein compare
Atu0941 -0.7 -0.6 hypothetical protein compare
Atu0845 -0.7 -3.2 hypothetical protein compare
Atu4853 -0.7 -5.0 hypothetical protein compare
Atu4884 -0.7 -2.5 hypothetical protein compare
Atu2692 -0.7 -2.4 intracellular septation protein compare
Atu0812 -0.7 -1.7 hypothetical protein compare
Atu0749 -0.7 -2.2 biotin synthesis BioY protein compare
Atu4711 -0.7 -2.3 two component sensor kinase compare
Atu3706 -0.7 -3.3 D-3-phosphoglycerate dehydrogenase compare
Atu1902 -0.7 -2.3 transketolase compare
Atu2548 -0.7 -4.3 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4841 -0.7 -3.7 DeoR family transcriptional regulator compare
Atu2805 -0.7 -2.3 cobalamin synthesis protein compare
Atu3634 -0.7 -2.3 penicillin-binding protein dacf precursor compare
Atu1359 -0.7 -0.7 dnaK deletion suppressor protein compare
Atu1709 -0.7 -3.0 glycosyl hydrolase compare
Atu6133 -0.7 -2.1 conserved hypothetical protein compare
Atu0188 -0.7 -1.7 ABC transporter, membrane spanning protein (peptide) compare
Atu4896 -0.7 -1.4 acetyltransferase compare
Atu2766 -0.7 -5.5 NAD-glutamate dehydrogenase compare
Atu2040 -0.7 -2.3 phosphoserine phosphatase compare
Atu0036 -0.7 -1.6 hypothetical protein compare
Atu3012 -0.7 -1.4 hypothetical protein compare
Atu0496 -0.7 -1.7 hypothetical protein compare
Atu0467 -0.6 -2.2 hypothetical protein compare
Atu0026 -0.6 -0.7 hypothetical protein compare
Atu5034 -0.6 -1.4 hypothetical protein compare
Atu3578 -0.6 -2.5 glycerol-3-phosphate dehydrogenase compare
Atu3912 -0.6 -3.3 hypothetical protein compare
Atu4844 -0.6 -3.6 sugar ABC transporter permease compare
Atu8023 -0.6 -1.2 hypothetical protein compare
Atu2083 -0.6 -1.8 DNA repair protein RecN compare
Atu3482 -0.6 -3.2 pantoate--beta-alanine ligase compare
Atu1163 -0.6 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3044 -0.6 -1.6 asparaginase compare
Atu4864 -0.6 -2.8 MarR family transcriptional regulator compare
Atu4890 -0.6 -1.0 IS426 transposase compare
Atu1469 -0.6 -1.2 hypothetical protein compare
Atu1182 -0.6 -1.2 hypothetical protein compare
Atu2036 -0.6 -4.0 acetolactate synthase III, large subunit compare
Atu1336 -0.6 -2.3 hypothetical protein compare
Atu0185 -0.6 -1.4 methylglyoxal synthase compare
Atu1380 -0.6 -2.2 zinc metallopeptidase compare
Atu0762 -0.6 -1.8 hypothetical protein compare
Atu4832 -0.6 -4.2 hypothetical protein compare
Atu0960 -0.6 -3.3 MFS permease compare
Atu1175 -0.6 -1.0 hypothetical protein compare
Atu2578 -0.6 -3.0 cAMP-dependent protein kinase regulatory subunit compare
Atu0427 -0.6 -2.0 hypothetical protein compare
Atu4815 -0.6 -3.0 glycosyltransferase compare
Atu2804 -0.6 -3.1 cobaltochelatase subunit compare
Atu4866 -0.6 -2.4 hypothetical protein compare
Atu2163 -0.6 -0.8 hypothetical protein compare
Atu2113 -0.6 -1.0 N-acetylmuramoyl-L-alanine amidase compare
Atu3048 -0.6 -3.0 oligopeptide ABC transporter permease compare
Atu2650 -0.6 -3.2 glycerol-3-phosphate dehydrogenase compare
Atu3721 -0.6 -0.8 hypothetical protein compare
Atu5438 -0.6 -2.1 3-oxoacyl-ACP reductase compare
Atu1339 -0.6 -1.6 ribonuclease E compare
Atu1405 -0.6 -2.5 transcriptional regulator, GntR family compare
Atu4852 -0.6 -1.6 hypothetical protein compare
Atu4814 -0.6 -3.0 acetyltransferase compare
Atu2797 -0.6 -1.5 cobalamin biosynthesis protein compare
Atu3919 -0.6 -3.3 hypothetical protein compare
Atu4773 -0.6 -0.9 two component response regulator compare
Atu1291 -0.6 -1.3 hypothetical protein compare
Atu3084 -0.6 -2.5 RNA polymerase sigma factor compare
Atu0726 -0.6 -2.8 ring hydroxylating dioxygenase, alpha-subunit compare
Atu4861 -0.6 -2.6 IS21 family transposase compare
Atu3045 -0.6 -1.4 hypothetical protein compare
Atu1812 -0.6 -1.7 hypothetical protein compare
Atu3065 -0.5 -3.6 sugar ABC transporter permease compare
Atu3054 -0.5 -3.2 hypothetical protein compare
Atu1620 -0.5 -3.1 triosephosphate isomerase compare
Atu0031 -0.5 -0.9 PTS system, IIA component compare
Atu0074 -0.5 -2.6 molybdopterin biosynthesis protein compare
Atu2809 -0.5 -2.5 cobalamin biosynthesis protein compare
Atu0454 -0.5 -2.5 hypothetical protein compare
Atu0846 -0.5 -1.2 transcriptional regulator, MarR family compare
Atu3160 -0.5 -0.8 hypothetical protein compare
Atu4889 -0.5 -2.0 hypothetical protein compare
Atu3798 -0.5 -1.6 TetR family transcriptional regulator compare
Atu2831 -0.5 -2.2 glucose inhibited division protein A compare
Atu5517 -0.5 -1.5 hypothetical protein compare
Atu4040 -0.5 -1.8 hypothetical protein compare
Atu3731 -0.5 -2.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu0689 -0.5 -3.4 ribosomal large subunit pseudouridine synthase B compare
Atu4870 -0.5 -3.0 NADP-dependent quinone oxidoreductase compare
Atu4873 -0.5 -2.9 TetR family transcriptional regulator compare
Atu8159 -0.5 -1.5 hypothetical protein compare
Atu1355 -0.5 -2.3 hypothetical protein compare
Atu2808 -0.5 -2.5 cobyric acid synthase compare
Atu1076 -0.5 -1.6 colicin V production protein compare
Atu3365 -0.5 -2.8 hypothetical protein compare
Atu4846 -0.5 -3.6 hypothetical protein compare
Atu0966 -0.5 -1.6 hypothetical protein compare
Atu1760 -0.5 -0.8 hypothetical protein compare
Atu2073 -0.5 -1.6 membrane protein compare
Atu2762 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress Cobalt chloride hexahydrate in Agrobacterium fabrum C58

For stress Cobalt chloride hexahydrate across organisms