Experiment set4IT008 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu0017 -3.1 -3.0 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1307 -2.8 -8.1 dihydroorotase compare
Atu0346 -2.5 -5.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1030 -2.5 -2.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1687 -2.4 -6.2 anthranilate phosphoribosyltransferase compare
Atu1308 -2.3 -5.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1688 -2.3 -4.6 indole-3-glycerol-phosphate synthase compare
Atu2289 -2.0 -11.4 anthranilate synthase component I and II compare
Atu1891 -2.0 -4.5 cobalamin biosynthesis protein compare
Atu0400 -1.9 -5.0 orotate phosphoribosyltransferase compare
Atu3008 -1.9 -1.8 hypothetical protein compare
Atu3120 -1.8 -1.7 hypothetical protein compare
Atu2710 -1.7 -6.7 hypothetical protein compare
Atu2728 -1.7 -5.8 beta (1-->2) glucan export ATP-binding protein compare
Atu3469 -1.7 -2.8 phosphoglyceromutase compare
Atu0189 -1.7 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu0876 -1.7 -1.8 superoxide dismutase compare
Atu2125 -1.6 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu3468 -1.6 -1.3 hypothetical protein compare
Atu5115 -1.5 -1.7 hypothetical protein compare
Atu0184 -1.5 -2.6 glucokinase compare
Atu0399 -1.5 -4.9 dihydroorotase compare
Atu0434 -1.5 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0041 -1.5 -2.0 glutamine amidotransferase compare
Atu0103 -1.5 -7.9 penicillin-binding protein compare
Atu2800 -1.4 -1.9 precorrin-3B C17-methyltransferase compare
Atu0298 -1.4 -4.7 orotidine 5 compare
Atu0972 -1.4 -5.2 lipA protein compare
Atu0031 -1.3 -2.0 PTS system, IIA component compare
Atu1686 -1.3 -6.5 peptidyl-prolyl cis-trans isomerse D compare
Atu0941 -1.3 -1.1 hypothetical protein compare
Atu1110 -1.3 -2.8 cytosol aminopeptidase compare
Atu0188 -1.3 -2.1 ABC transporter, membrane spanning protein (peptide) compare
Atu1845 -1.2 -3.8 phosphoribosylformylglycinamidine synthase I compare
Atu3750 -1.2 -3.1 thiamine-phosphate pyrophosphorylase compare
Atu0486 -1.2 -4.6 dihydroorotate dehydrogenase compare
Atu1685 -1.2 -1.1 hypothetical protein compare
Atu3739 -1.1 -2.6 phosphoglycerate kinase compare
Atu1446 -1.1 -1.5 two component response regulator compare
Atu2640 -1.1 -3.1 hypothetical protein compare
Atu1028 -1.1 -2.9 hypothetical protein compare
Atu1588 -1.1 -5.4 homoserine dehydrogenase compare
Atu2368 -1.1 -1.3 hypothetical protein compare
Atu0190 -1.0 -4.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3755 -1.0 -4.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1141 -1.0 -5.7 Phosphoribosylglycinamide synthetase compare
Atu4773 -1.0 -1.0 two component response regulator compare
Atu2057 -1.0 -1.6 DNA helicase II compare
Atu1874 -1.0 -2.0 RecA protein compare
Atu1844 -1.0 -2.8 Phosphoribosylformylglycinamidine synthetase compare
Atu0141 -1.0 -1.0 cytochrome O ubiquinol oxidase subunit I compare
Atu4075 -1.0 -4.3 glycogen synthase compare
Atu8025 -1.0 -1.6 hypothetical protein compare
Atu2249 -1.0 -1.0 hypothetical protein compare
Atu4418 -0.9 -3.2 glutaryl-CoA dehydrogenase compare
Atu1774 -0.9 -5.6 ABC transporter, substrate binding protein (peptide) compare
Atu0647 -0.9 -3.0 phosphoribosylamine--glycine ligase compare
Atu1344 -0.9 -2.2 hypothetical protein compare
Atu3315 -0.9 -3.5 UDP-glucose 4-epimerase compare
Atu1140 -0.9 -2.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2442 -0.9 -2.7 hypothetical protein compare
Atu3014 -0.9 -1.8 hypothetical protein compare
Atu2807 -0.9 -4.3 cob(I)alamin adenosyltransferase compare
Atu8052 -0.9 -0.8 hypothetical protein compare
Atu0025 -0.9 -1.8 hypothetical protein compare
Atu2802 -0.9 -4.5 precorrin-8X methylmutase compare
Atu3121 -0.8 -1.1 cold shock protein compare
Atu0039 -0.8 -1.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu0943 -0.8 -1.4 hypothetical protein compare
Atu5157 -0.8 -1.6 hypothetical protein compare
Atu4391 -0.8 -1.2 nitric oxide reductase NorE protein compare
Atu8087 -0.8 -1.1 putative peptidoglycan binding protein compare
Atu6036 -0.8 -0.7 entry-exclusion protein compare
Atu2793 -0.8 -2.8 cobyrinic acid a,c-diamide synthase compare
Atu0795 -0.8 -1.9 hypothetical protein compare
Atu2040 -0.8 -2.8 phosphoserine phosphatase compare
Atu1163 -0.8 -1.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0471 -0.8 -1.6 hypothetical protein compare
Atu0331 -0.8 -2.6 sigma-54 modulation protein compare
Atu5130 -0.8 -2.6 attachment protein compare
Atu0040 -0.8 -0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1714 -0.7 -1.2 exonuclease III compare
Atu2809 -0.7 -3.2 cobalamin biosynthesis protein compare
Atu1075 -0.7 -2.8 amidophosphoribosyltransferase compare
Atu3754 -0.7 -2.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3461 -0.7 -1.3 GntR family transcriptional regulator compare
Atu4072 -0.7 -0.9 nodulation protein N compare
Atu0598 -0.7 -3.5 phosphogluconate dehydratase compare
Atu2801 -0.7 -2.9 precorrin-2 C20 methyltransferase compare
Atu3598 -0.7 -1.0 thiol:disulfide interchange protein compare
Atu4317 -0.7 -1.1 TetR family transcriptional regulator compare
Atu1354 -0.7 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu8165 -0.7 -1.1 hypothetical protein compare
Atu2439 -0.7 -0.9 hypothetical protein compare
Atu4873 -0.7 -3.7 TetR family transcriptional regulator compare
Atu2804 -0.7 -4.2 cobaltochelatase subunit compare
Atu2207 -0.7 -2.2 two component sensor kinase compare
Atu0185 -0.7 -3.8 methylglyoxal synthase compare
Atu3668 -0.7 -2.1 siderophore biosynthesis protein compare
Atu1850 -0.7 -2.4 phosphoribosylformylglycinamidine synthetase II compare
Atu4893 -0.7 -2.7 hypothetical protein compare
Atu8168 -0.7 -2.1 hypothetical protein compare
Atu2127 -0.7 -3.5 L-carnitine dehydratase compare
Atu2113 -0.7 -1.8 N-acetylmuramoyl-L-alanine amidase compare
Atu8185 -0.7 -1.7 hypothetical protein compare
Atu4616 -0.7 -1.2 dTDP-4-dehydrorhamnose reductase compare
Atu0470 -0.7 -1.8 hypothetical protein compare
Atu3727 -0.7 -2.9 hypothetical protein compare
Atu2729 -0.7 -1.4 hypothetical protein compare
Atu8156 -0.7 -2.5 hypothetical protein compare
Atu4869 -0.7 -1.9 hypothetical protein compare
Atu3706 -0.7 -3.4 D-3-phosphoglycerate dehydrogenase compare
Atu1484 -0.6 -2.1 transcriptional regulator compare
Atu2237 -0.6 -2.1 cytochrome c1 compare
Atu0038 -0.6 -2.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3730 -0.6 -0.9 hypothetical protein compare
Atu4887 -0.6 -2.7 hypothetical protein compare
Atu3033 -0.6 -2.7 hypothetical protein compare
Atu3963 -0.6 -3.3 GntR family transcriptional regulator compare
Atu0971 -0.6 -2.0 two component sensor kinase compare
Atu0977 -0.6 -2.0 serine protease DO-like protease compare
Atu1694 -0.6 -1.7 hypothetical protein compare
Atu3721 -0.6 -0.9 hypothetical protein compare
Atu3634 -0.6 -2.1 penicillin-binding protein dacf precursor compare
Atu2462 -0.6 -1.5 hypothetical protein compare
Atu2808 -0.6 -3.2 cobyric acid synthase compare
Atu2650 -0.6 -3.7 glycerol-3-phosphate dehydrogenase compare
Atu2805 -0.6 -2.1 cobalamin synthesis protein compare
Atu1149 -0.6 -1.0 adenylate cyclase compare
Atu1252 -0.6 -1.6 hypothetical protein compare
Atu1004 -0.6 -1.6 hypothetical protein compare
Atu8183 -0.6 -2.9 hypothetical protein compare
Atu4854 -0.6 -2.3 hypothetical protein compare
Atu4882 -0.6 -1.1 hypothetical protein compare
Atu3483 -0.6 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1801 -0.6 -1.6 hypothetical protein compare
Atu1213 -0.6 -1.8 hypothetical protein compare
Atu3697 -0.6 -2.9 ATP-dependent protease LA 2 compare
Atu2036 -0.6 -3.7 acetolactate synthase III, large subunit compare
Atu8190 -0.6 -1.4 hypothetical protein compare
Atu1464 -0.6 -2.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu4666 -0.6 -2.8 HlyD family secretion protein compare
Atu1779 -0.6 -1.3 hypothetical protein compare
Atu3034 -0.6 -3.1 ROK family transcriptional regulator compare
Atu3018 -0.6 -2.4 hypothetical protein compare
Atu3807 -0.5 -1.9 AsnC family transcriptional regulator compare
Atu2436 -0.5 -1.7 hypothetical protein compare
Atu1380 -0.5 -2.2 zinc metallopeptidase compare
Atu0690 -0.5 -0.8 hypothetical protein compare
Atu3472 -0.5 -1.7 2-oxoisovalerate dehydrogenase subunit beta compare
Atu3387 -0.5 -1.8 sigma factor compare
Atu2526 -0.5 -1.8 hypothetical protein compare
Atu1754 -0.5 -1.1 hypothetical protein compare
Atu2349 -0.5 -1.0 hypothetical protein compare
Atu2796 -0.5 -2.2 precorrin-4 C11-methyltransferase compare
Atu0029 -0.5 -2.3 S-adenosylhomocysteine hydrolase compare
Atu4892 -0.5 -3.6 hypothetical protein compare
Atu1254 -0.5 -1.3 transcriptional regulator, ArsR family compare
Atu1457 -0.5 -1.8 hypothetical protein compare
Atu3583 -0.5 -1.8 hypothetical protein compare
Atu0419 -0.5 -1.4 two component sensor kinase compare
Atu2347 -0.5 -3.1 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu3013 -0.5 -1.4 hypothetical protein compare
Atu4199 -0.5 -2.8 TetR family transcriptional regulator compare
Atu0230 -0.5 -1.1 hypothetical protein compare
Atu1127 -0.5 -0.7 molybdopterin converting factor small subunit compare
Atu3597 -0.5 -2.6 3-hydroxybutyryl-CoA dehydrogenase compare
Atu3910 -0.5 -1.9 LamB/YcsF family protein compare
Atu4841 -0.5 -3.2 DeoR family transcriptional regulator compare
Atu4875 -0.5 -1.7 hypothetical protein compare
Atu2033 -0.5 -2.7 hypothetical protein compare
Atu1077 -0.5 -1.4 DNA repair protein compare
Atu2058 -0.5 -1.5 hypothetical protein compare
Atu3515 -0.5 -1.4 hypothetical protein compare
Atu4877 -0.5 -2.7 short-chain dehydrogenase compare
Atu3044 -0.5 -1.7 asparaginase compare
Atu4866 -0.5 -3.2 hypothetical protein compare
Atu8082 -0.5 -1.1 hypothetical protein compare
Atu1223 -0.5 -0.6 hypothetical protein compare
Atu2217 -0.5 -2.3 hypothetical protein compare
Atu1371 -0.5 -2.0 glycerophosphoryl diester phosphodiesterase compare
Atu1469 -0.5 -1.0 hypothetical protein compare
Atu4819 -0.5 -1.3 hypothetical protein compare
Atu3485 -0.5 -2.7 short chain dehydrogenase compare
Atu3042 -0.5 -3.3 hypothetical protein compare
Atu2464 -0.5 -1.5 formyltetrahydrofolate deformylase compare
Atu1620 -0.5 -3.2 triosephosphate isomerase compare
Atu4865 -0.5 -2.2 oxidoreductase compare
Atu0590 -0.5 -3.2 transcriptional regulator repressor compare
Atu2028 -0.5 -1.0 transcriptional regulator, ArsR family compare
Atu2615 -0.5 -3.1 hypothetical protein compare
Atu4671 -0.5 -1.3 response regulator compare
Atu8029 -0.5 -0.8 hypothetical protein compare
Atu8126 -0.5 -2.0 putative phage tail protein I compare
Atu3421 -0.5 -1.7 hypothetical protein compare
Atu3291 -0.5 -1.2 Lpr family transcriptional regulator compare
Atu1182 -0.5 -0.7 hypothetical protein compare
Atu4618 -0.5 -3.3 dTDP-rhamnose-3,5-epimerase compare
Atu3365 -0.5 -2.5 hypothetical protein compare
Atu0156 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a_control experiments