Experiment set4IT007 for Escherichia coli BL21
Mixed culture, Bdellovibrio bacteriovorus HD100_1
Group: baloMedia: M9 (0.1x) + CaCl2, MgSO4 (5mM ), pH=7
Culturing: BL21_ML4, 48-well_plate, Aerobic, at 30C (C), shaken=700 rpm
By: AR on 5/19/21
Media components: 0.4 g/L D-Glucose, 0.2 mM Magnesium sulfate, 0.01 mM Calcium chloride, 1.28 g/L Sodium phosphate dibasic heptahydrate, 0.3 g/L Potassium phosphate monobasic, 0.05 g/L Sodium Chloride, 0.1 g/L Ammonium chloride (final concentrations)
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Biogenesis of cytochrome c oxidases | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| photosynthesis light reactions | 4 | 1 | 1 |
| NADPH to cytochrome c oxidase via plastocyanin (thylakoid membrane) | 4 | 1 | 1 |
| superpathway of photosynthetic hydrogen production | 6 | 3 | 1 |
| oxygenic photosynthesis | 17 | 11 | 1 |
| ethene biosynthesis V (engineered) | 25 | 18 | 1 |
| photosynthetic 3-hydroxybutanoate biosynthesis (engineered) | 26 | 19 | 1 |
| 1-butanol autotrophic biosynthesis (engineered) | 27 | 19 | 1 |