Experiment set4IT004 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu1687 -3.3 -7.7 anthranilate phosphoribosyltransferase compare
Atu0017 -3.2 -3.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1307 -2.5 -6.7 dihydroorotase compare
Atu0346 -2.5 -3.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1688 -2.4 -4.6 indole-3-glycerol-phosphate synthase compare
Atu1030 -2.3 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1308 -2.3 -6.4 aspartate carbamoyl transferase catalytic subunit compare
Atu2684 -2.3 -1.8 hypothetical protein compare
Atu3183 -2.1 -1.4 hypothetical protein compare
Atu2289 -2.0 -9.5 anthranilate synthase component I and II compare
Atu0486 -1.9 -5.0 dihydroorotate dehydrogenase compare
Atu0399 -1.7 -6.1 dihydroorotase compare
Atu3017 -1.5 -1.9 phosphoglyceromutase compare
Atu2710 -1.5 -7.3 hypothetical protein compare
Atu2554 -1.5 -2.4 lysyl-tRNA synthetase compare
Atu1845 -1.5 -2.5 phosphoribosylformylglycinamidine synthase I compare
Atu5115 -1.4 -1.5 hypothetical protein compare
Atu0298 -1.4 -5.5 orotidine 5 compare
Atu0434 -1.4 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1844 -1.4 -3.2 Phosphoribosylformylglycinamidine synthetase compare
Atu8087 -1.3 -1.4 putative peptidoglycan binding protein compare
Atu3009 -1.2 -1.6 exopolysaccharide production protein compare
Atu0189 -1.2 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1149 -1.2 -1.4 adenylate cyclase compare
Atu0361 -1.1 -2.1 transcriptional regulator compare
Atu0025 -1.1 -1.8 hypothetical protein compare
Atu2728 -1.1 -3.5 beta (1-->2) glucan export ATP-binding protein compare
Atu3001 -1.1 -2.6 hypothetical protein compare
Atu0470 -1.1 -2.6 hypothetical protein compare
Atu6036 -1.1 -0.8 entry-exclusion protein compare
Atu2125 -1.1 -1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu0400 -1.1 -2.2 orotate phosphoribosyltransferase compare
Atu0039 -1.1 -1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu0647 -1.1 -4.4 phosphoribosylamine--glycine ligase compare
Atu3754 -1.1 -6.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1891 -1.1 -3.3 cobalamin biosynthesis protein compare
Atu5475 -1.1 -1.6 hypothetical protein compare
Atu2113 -1.1 -1.8 N-acetylmuramoyl-L-alanine amidase compare
Atu0188 -1.0 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0598 -1.0 -4.5 phosphogluconate dehydratase compare
Atu1354 -1.0 -1.1 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1686 -1.0 -6.6 peptidyl-prolyl cis-trans isomerse D compare
Atu4882 -1.0 -2.0 hypothetical protein compare
Atu0103 -1.0 -5.7 penicillin-binding protein compare
Atu1028 -1.0 -1.9 hypothetical protein compare
Atu2662 -1.0 -1.1 acetyltransferase compare
Atu1140 -1.0 -2.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2057 -1.0 -1.8 DNA helicase II compare
Atu2640 -0.9 -2.8 hypothetical protein compare
Atu0687 -0.9 -2.2 hypothetical protein compare
Atu0421 -0.9 -1.3 ABC transporter, membrane spanning protein compare
Atu3634 -0.9 -3.1 penicillin-binding protein dacf precursor compare
Atu1446 -0.9 -1.6 two component response regulator compare
Atu0723 -0.9 -1.3 FAD dependent oxidoreductase compare
Atu0190 -0.9 -4.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2807 -0.9 -3.5 cob(I)alamin adenosyltransferase compare
Atu4317 -0.9 -1.7 TetR family transcriptional regulator compare
Atu3712 -0.9 -1.5 hypothetical protein compare
Atu1850 -0.9 -2.9 phosphoribosylformylglycinamidine synthetase II compare
Atu0769 -0.9 -1.1 protoheme IX farnesyltransferase compare
Atu3763 -0.8 -2.0 hypothetical protein compare
Atu0947 -0.8 -2.5 transcriptional regulator, AsnC family compare
Atu3469 -0.8 -1.4 phosphoglyceromutase compare
Atu0141 -0.8 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu3005 -0.8 -1.4 hypothetical protein compare
Atu1103 -0.8 -2.5 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0031 -0.8 -1.4 PTS system, IIA component compare
Atu0953 -0.8 -0.9 hypothetical protein compare
Atu3721 -0.8 -1.2 hypothetical protein compare
Atu4075 -0.8 -3.8 glycogen synthase compare
Atu0972 -0.8 -3.1 lipA protein compare
Atu1075 -0.8 -3.5 amidophosphoribosyltransferase compare
Atu2798 -0.8 -2.8 precorrin-6y methyltransferase compare
Atu1110 -0.8 -2.9 cytosol aminopeptidase compare
Atu1213 -0.8 -1.7 hypothetical protein compare
Atu1163 -0.8 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2805 -0.8 -3.4 cobalamin synthesis protein compare
Atu4418 -0.8 -2.5 glutaryl-CoA dehydrogenase compare
Atu0142 -0.8 -2.4 cytochrome o ubiquinol oxidase subunit II compare
Atu4896 -0.7 -2.3 acetyltransferase compare
Atu0886 -0.7 -1.2 hypothetical protein compare
Atu0467 -0.7 -2.4 hypothetical protein compare
Atu4873 -0.7 -3.9 TetR family transcriptional regulator compare
Atu3032 -0.7 -1.9 hypothetical protein compare
Atu1364 -0.7 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0295 -0.7 -2.4 hypothetical protein compare
Atu2036 -0.7 -4.5 acetolactate synthase III, large subunit compare
Atu5034 -0.7 -1.8 hypothetical protein compare
Atu1588 -0.7 -3.8 homoserine dehydrogenase compare
Atu4861 -0.7 -4.0 IS21 family transposase compare
Atu1052 -0.7 -2.6 hypothetical protein compare
Atu1535 -0.7 -0.9 cytochrome c oxidase, FixQ chain compare
Atu0471 -0.7 -2.1 hypothetical protein compare
Atu3034 -0.7 -3.1 ROK family transcriptional regulator compare
Atu0401 -0.7 -2.2 fructokinase compare
Atu4857 -0.6 -2.9 mobilization protein C compare
Atu8094 -0.6 -1.6 hypothetical protein compare
Atu2442 -0.6 -2.1 hypothetical protein compare
Atu4859 -0.6 -4.4 hypothetical protein compare
Atu2809 -0.6 -3.1 cobalamin biosynthesis protein compare
Atu0093 -0.6 -2.2 Recombination protein compare
Atu0765 -0.6 -3.2 TldD compare
Atu0925 -0.6 -1.5 hypothetical protein compare
Atu0464 -0.6 -3.8 hypothetical protein compare
Atu4831 -0.6 -3.5 hypothetical protein compare
Atu2692 -0.6 -1.7 intracellular septation protein compare
Atu3114 -0.6 -3.1 sugar ABC transporter substrate-binding protein compare
Atu1038 -0.6 -2.7 two component response regulator compare
Atu1983 -0.6 -2.4 hypothetical protein compare
Atu2067 -0.6 -0.8 hypothetical protein compare
Atu4866 -0.6 -2.7 hypothetical protein compare
Atu2790 -0.6 -1.5 3-isopropylmalate dehydratase, small subunit compare
Atu4825 -0.6 -2.3 dehydrogenase compare
Atu4346 -0.6 -2.3 hypothetical protein compare
Atu2207 -0.6 -2.6 two component sensor kinase compare
Atu1774 -0.6 -2.9 ABC transporter, substrate binding protein (peptide) compare
Atu2808 -0.6 -3.6 cobyric acid synthase compare
Atu0369 -0.6 -2.3 hypothetical protein compare
Atu0038 -0.6 -2.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3013 -0.6 -2.3 hypothetical protein compare
Atu0354 -0.6 -1.2 ferric uptake regulator compare
Atu3468 -0.6 -0.7 hypothetical protein compare
Atu2343 -0.6 -2.1 acetyltransferase compare
Atu5088 -0.6 -0.7 hypothetical protein compare
Atu1380 -0.6 -2.9 zinc metallopeptidase compare
Atu3648 -0.6 -1.8 hypothetical protein compare
Atu3289 -0.6 -2.1 thiamine-phosphate pyrophosphorylase compare
Atu4773 -0.6 -1.1 two component response regulator compare
Atu4824 -0.6 -2.8 IclR family transcriptional regulator compare
Atu2802 -0.6 -2.5 precorrin-8X methylmutase compare
Atu0184 -0.6 -0.8 glucokinase compare
Atu8194 -0.6 -1.7 hypothetical protein compare
Atu0193 -0.6 -1.4 glutamine synthetase compare
Atu0460 -0.6 -3.1 hypothetical protein compare
Atu8126 -0.6 -3.0 putative phage tail protein I compare
Atu3120 -0.6 -0.7 hypothetical protein compare
Atu2620 -0.6 -1.0 hypothetical protein compare
Atu1056 -0.6 -2.4 hypothetical protein compare
Atu3755 -0.6 -1.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0535 -0.5 -2.3 hypothetical protein compare
Atu3706 -0.5 -2.6 D-3-phosphoglycerate dehydrogenase compare
Atu8184 -0.5 -1.9 hypothetical protein compare
Atu1057 -0.5 -2.7 ADP-Ribose Pyrophosphatase compare
Atu3077 -0.5 -2.8 beta-lactamase compare
Atu0062 -0.5 -2.9 transcriptional regulator, ROK family compare
Atu4852 -0.5 -1.7 hypothetical protein compare
Atu0977 -0.5 -1.5 serine protease DO-like protease compare
Atu3044 -0.5 -2.1 asparaginase compare
Atu0130 -0.5 -2.4 cytidine deaminase compare
Atu1219 -0.5 -0.5 hypothetical protein compare
Atu3038 -0.5 -3.1 dipeptide ABC transporter ATPase compare
Atu1754 -0.5 -0.6 hypothetical protein compare
Atu0795 -0.5 -1.2 hypothetical protein compare
Atu2578 -0.5 -2.5 cAMP-dependent protein kinase regulatory subunit compare
Atu1760 -0.5 -0.9 hypothetical protein compare
Atu1141 -0.5 -2.2 Phosphoribosylglycinamide synthetase compare
Atu4854 -0.5 -1.6 hypothetical protein compare
Atu3123 -0.5 -1.9 30S ribosomal protein S21 compare
Atu1573 -0.5 -0.8 hypothetical protein compare
Atu5171 -0.5 -1.8 type IV secretion protein AvhB10 compare
Atu3727 -0.5 -1.4 hypothetical protein compare
Atu2799 -0.5 -2.2 precorrin-6x reductase compare
Atu1677 -0.5 -2.1 queuine tRNA-ribosyltransferase compare
Atu1592 -0.5 -1.8 hypothetical protein compare
Atu4888 -0.5 -1.7 hypothetical protein compare
Atu2548 -0.5 -3.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu5142 -0.5 -1.0 hypothetical protein compare
Atu4658 -0.5 -2.0 hypothetical protein compare
Atu3067 -0.5 -1.7 hypothetical protein compare
Atu0943 -0.5 -1.3 hypothetical protein compare
Atu0892 -0.5 -2.2 hypothetical protein compare
Atu0876 -0.5 -0.9 superoxide dismutase compare
Atu3593 -0.5 -2.6 hypothetical protein compare
Atu3010 -0.5 -3.0 hypothetical protein compare
Atu4836 -0.5 -2.8 hypothetical protein compare
Atu3483 -0.5 -1.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu4840 -0.5 -1.7 hypothetical protein compare
Atu4853 -0.5 -3.3 hypothetical protein compare
Atu4470 -0.5 -2.1 iron ABC transporter ATPase compare
Atu1542 -0.5 -2.2 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2766 -0.5 -4.0 NAD-glutamate dehydrogenase compare
Atu4897 -0.5 -0.9 hypothetical protein compare
Atu6106 -0.5 -1.1 conserved hypothetical protein compare
Atu3036 -0.5 -1.4 dipeptide ABC transporter permease compare
Atu0689 -0.5 -3.0 ribosomal large subunit pseudouridine synthase B compare
Atu4685 -0.5 -2.5 LacI family transcriptional regulator compare
Atu1589 -0.5 -2.3 aminotransferase, class I compare
Atu4671 -0.5 -0.9 response regulator compare
Atu1570 -0.5 -0.6 hypothetical protein compare
Atu4068 -0.5 -0.9 sarcosine oxidase delta subunit compare
Atu3037 -0.5 -2.9 dipeptide ABC transporter permease compare
Atu0477 -0.5 -0.9 hypothetical protein compare
Atu2804 -0.5 -2.5 cobaltochelatase subunit compare
Atu2278 -0.5 -3.0 transcriptional regulator, ArsR family compare
Atu4799 -0.5 -2.8 dTDP-4-dehydrorhamnose 3,5-epimerase compare
Atu1355 -0.5 -2.4 hypothetical protein compare
Atu3026 -0.5 -2.4 short chain dehydrogenase compare
Atu8165 -0.5 -0.8 hypothetical protein compare
Atu1709 -0.5 -2.0 glycosyl hydrolase compare
Atu0375 -0.5 -0.8 small heat shock protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a_control experiments