Experiment set4IT002 for Agrobacterium fabrum C58

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
Atu1307 -3.6 -5.7 dihydroorotase compare
Atu3730 -3.3 -2.9 hypothetical protein compare
Atu0017 -3.3 -3.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0184 -3.1 -3.8 glucokinase compare
Atu1688 -2.9 -5.5 indole-3-glycerol-phosphate synthase compare
Atu0031 -2.8 -2.7 PTS system, IIA component compare
Atu2067 -2.5 -1.9 hypothetical protein compare
Atu0039 -2.3 -2.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu0400 -2.3 -5.4 orotate phosphoribosyltransferase compare
Atu1308 -2.2 -8.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2289 -2.2 -12.2 anthranilate synthase component I and II compare
Atu3469 -2.1 -3.2 phosphoglyceromutase compare
Atu0486 -2.0 -7.2 dihydroorotate dehydrogenase compare
Atu0422 -1.9 -2.5 ABC transporter, membrane spanning protein compare
Atu0399 -1.8 -5.6 dihydroorotase compare
Atu3739 -1.8 -2.5 phosphoglycerate kinase compare
Atu1687 -1.8 -5.8 anthranilate phosphoribosyltransferase compare
Atu4217 -1.7 -1.8 TetR family transcriptional regulator compare
Atu1028 -1.7 -2.7 hypothetical protein compare
Atu2684 -1.6 -1.2 hypothetical protein compare
Atu0298 -1.6 -5.2 orotidine 5 compare
Atu0188 -1.6 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1030 -1.6 -2.0 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1354 -1.5 -1.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2193 -1.5 -1.4 hypothetical protein compare
Atu0346 -1.4 -1.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0434 -1.4 -2.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4773 -1.4 -1.8 two component response regulator compare
Atu3012 -1.4 -1.9 hypothetical protein compare
Atu0647 -1.4 -5.2 phosphoribosylamine--glycine ligase compare
Atu1850 -1.3 -3.9 phosphoribosylformylglycinamidine synthetase II compare
Atu3005 -1.3 -1.5 hypothetical protein compare
Atu2728 -1.3 -3.1 beta (1-->2) glucan export ATP-binding protein compare
Atu1844 -1.3 -3.8 Phosphoribosylformylglycinamidine synthetase compare
Atu0103 -1.3 -6.5 penicillin-binding protein compare
Atu2710 -1.3 -5.9 hypothetical protein compare
Atu1774 -1.2 -5.8 ABC transporter, substrate binding protein (peptide) compare
Atu4890 -1.2 -1.7 IS426 transposase compare
Atu1686 -1.2 -7.7 peptidyl-prolyl cis-trans isomerse D compare
Atu4317 -1.2 -1.7 TetR family transcriptional regulator compare
Atu1891 -1.2 -2.3 cobalamin biosynthesis protein compare
Atu4187 -1.2 -1.5 tRNA-Met compare
Atu0972 -1.2 -6.8 lipA protein compare
Atu1140 -1.2 -5.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5115 -1.2 -1.2 hypothetical protein compare
Atu2207 -1.1 -4.9 two component sensor kinase compare
Atu1359 -1.1 -1.2 dnaK deletion suppressor protein compare
Atu1446 -1.1 -2.6 two component response regulator compare
Atu3754 -1.1 -4.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0025 -1.1 -2.0 hypothetical protein compare
Atu2787 -1.1 -1.1 hypothetical protein compare
Atu1075 -1.0 -4.0 amidophosphoribosyltransferase compare
Atu0040 -1.0 -1.1 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1141 -1.0 -5.5 Phosphoribosylglycinamide synthetase compare
Atu5540 -1.0 -0.9 hypothetical protein compare
Atu0690 -1.0 -2.4 hypothetical protein compare
Atu0598 -1.0 -5.8 phosphogluconate dehydratase compare
Atu4616 -1.0 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu0115 -0.9 -0.9 hypothetical protein compare
Atu2634 -0.9 -1.8 hypothetical protein compare
Atu0565 -0.9 -1.7 hypothetical protein compare
Atu0190 -0.9 -4.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1588 -0.9 -3.7 homoserine dehydrogenase compare
Atu2040 -0.9 -2.7 phosphoserine phosphatase compare
Atu1149 -0.8 -1.0 adenylate cyclase compare
Atu4133 -0.8 -1.1 hypothetical protein compare
Atu4075 -0.8 -3.3 glycogen synthase compare
Atu0029 -0.8 -3.4 S-adenosylhomocysteine hydrolase compare
Atu2113 -0.8 -1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu3750 -0.8 -2.5 thiamine-phosphate pyrophosphorylase compare
Atu2798 -0.8 -2.4 precorrin-6y methyltransferase compare
Atu2036 -0.8 -5.2 acetolactate synthase III, large subunit compare
Atu0470 -0.8 -2.1 hypothetical protein compare
Atu2650 -0.8 -4.5 glycerol-3-phosphate dehydrogenase compare
Atu3707 -0.8 -2.8 phosphoserine aminotransferase compare
Atu4166 -0.8 -1.7 UDP-glucose 4-epimerase compare
Atu1620 -0.8 -5.2 triosephosphate isomerase compare
Atu3755 -0.8 -2.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0941 -0.8 -0.8 hypothetical protein compare
Atu1845 -0.8 -1.8 phosphoribosylformylglycinamidine synthase I compare
Atu4139 -0.8 -2.2 hypothetical protein compare
Atu0912 -0.8 -1.1 Na+/H+ antiporter compare
Atu0435 -0.7 -1.8 tRNA-Gly compare
Atu2800 -0.7 -1.4 precorrin-3B C17-methyltransferase compare
Atu2555 -0.7 -1.9 L-lysine 2,3-aminomutase compare
Atu0812 -0.7 -1.4 hypothetical protein compare
Atu2801 -0.7 -2.4 precorrin-2 C20 methyltransferase compare
Atu1110 -0.7 -2.1 cytosol aminopeptidase compare
Atu2802 -0.7 -3.6 precorrin-8X methylmutase compare
Atu1968 -0.7 -1.6 hypothetical protein compare
Atu0971 -0.7 -2.7 two component sensor kinase compare
Atu0976 -0.7 -1.2 cycL protein compare
Atu1874 -0.7 -1.2 RecA protein compare
Atu4050 -0.7 -2.2 UTP-glucose-1-phosphate uridylyltransferase compare
Atu1364 -0.7 -2.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0419 -0.7 -2.0 two component sensor kinase compare
Atu1254 -0.7 -1.4 transcriptional regulator, ArsR family compare
Atu2808 -0.7 -3.5 cobyric acid synthase compare
Atu0361 -0.7 -1.2 transcriptional regulator compare
Atu4873 -0.7 -3.8 TetR family transcriptional regulator compare
Atu0986 -0.7 -1.1 hypothetical protein compare
Atu1518 -0.7 -2.0 transcriptional regulator, Fur family compare
Atu2831 -0.7 -2.3 glucose inhibited division protein A compare
Atu0185 -0.7 -2.7 methylglyoxal synthase compare
Atu0795 -0.7 -1.1 hypothetical protein compare
Atu0189 -0.7 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0723 -0.7 -1.0 FAD dependent oxidoreductase compare
Atu0401 -0.7 -2.7 fructokinase compare
Atu0105 -0.6 -1.1 hypothetical protein compare
Atu0767 -0.6 -3.7 cytochrome c oxidase subunit II compare
Atu5155 -0.6 -1.7 MarR family transcriptional regulator compare
Atu1846 -0.6 -1.1 hypothetical protein compare
Atu3267 -0.6 -2.3 dipeptide ABC transporter permease compare
Atu3031 -0.6 -0.9 hypothetical protein compare
Atu3706 -0.6 -2.5 D-3-phosphoglycerate dehydrogenase compare
Atu4825 -0.6 -2.9 dehydrogenase compare
Atu0769 -0.6 -0.5 protoheme IX farnesyltransferase compare
Atu2807 -0.6 -2.6 cob(I)alamin adenosyltransferase compare
Atu4418 -0.6 -2.0 glutaryl-CoA dehydrogenase compare
Atu3712 -0.6 -1.1 hypothetical protein compare
Atu2238 -0.6 -3.5 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1355 -0.6 -3.3 hypothetical protein compare
Atu1542 -0.6 -3.1 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1589 -0.6 -2.6 aminotransferase, class I compare
Atu0977 -0.6 -2.0 serine protease DO-like protease compare
Atu2793 -0.6 -2.2 cobyrinic acid a,c-diamide synthase compare
Atu8036 -0.6 -1.5 protein YBGT-like protein compare
Atu2192 -0.6 -1.0 hypothetical protein compare
Atu3120 -0.6 -0.5 hypothetical protein compare
Atu4852 -0.6 -2.8 hypothetical protein compare
Atu4161 -0.6 -1.2 hypothetical protein compare
Atu2034 -0.6 -2.4 transcriptional regulator, ArsR family compare
Atu8046 -0.6 -1.8 hypothetical protein compare
Atu2797 -0.6 -2.5 cobalamin biosynthesis protein compare
Atu1694 -0.6 -1.4 hypothetical protein compare
Atu2733 -0.6 -1.5 hypothetical protein compare
Atu5426 -0.6 -2.4 hypothetical protein compare
Atu3506 -0.6 -1.7 hypothetical protein compare
Atu3078 -0.5 -1.9 LysR family transcriptional regulator compare
Atu3468 -0.5 -0.6 hypothetical protein compare
Atu8025 -0.5 -0.8 hypothetical protein compare
Atu0727 -0.5 -4.3 ferredoxin I compare
Atu1176 -0.5 -1.6 hypothetical protein compare
Atu6131 -0.5 -2.2 TraR Antiactivator compare
Atu1517 -0.5 -1.8 hypothetical protein compare
Atu1163 -0.5 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2683 -0.5 -1.0 hypothetical protein compare
Atu3466 -0.5 -1.7 ArsR family transcriptional regulator compare
Atu2439 -0.5 -0.8 hypothetical protein compare
Atu3429 -0.5 -0.9 hypothetical protein compare
Atu4053 -0.5 -0.9 succinoglycan biosynthesis protein compare
Atu0041 -0.5 -0.6 glutamine amidotransferase compare
Atu5186 -0.5 -1.1 hypothetical protein compare
Atu4819 -0.5 -1.5 hypothetical protein compare
Atu2436 -0.5 -2.0 hypothetical protein compare
Atu0421 -0.5 -0.9 ABC transporter, membrane spanning protein compare
Atu2804 -0.5 -3.4 cobaltochelatase subunit compare
Atu5157 -0.5 -2.2 hypothetical protein compare
Atu1779 -0.5 -1.2 hypothetical protein compare
Atu4346 -0.5 -2.2 hypothetical protein compare
Atu3030 -0.5 -2.3 hypothetical protein compare
Atu3763 -0.5 -1.1 hypothetical protein compare
Atu5485 -0.5 -1.3 hypothetical protein compare
Atu1801 -0.5 -1.1 hypothetical protein compare
Atu3733 -0.5 -0.7 hypothetical protein compare
Atu8126 -0.5 -3.3 putative phage tail protein I compare
Atu4200 -0.5 -1.6 hypothetical protein compare
Atu3518 -0.5 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4385 -0.5 -1.8 hypothetical protein compare
Atu0973 -0.5 -3.3 cycH protein compare
Atu2809 -0.5 -2.5 cobalamin biosynthesis protein compare
Atu1810 -0.5 -0.6 hypothetical protein compare
Atu1242 -0.5 -2.9 cytochrome oxidase assembly factor compare
Atu0457 -0.5 -3.4 hypothetical protein compare
Atu0386 -0.5 -1.1 hypothetical protein compare
Atu3123 -0.5 -2.0 30S ribosomal protein S21 compare
Atu4866 -0.5 -2.0 hypothetical protein compare
Atu1739 -0.5 -1.6 permease compare
Atu3095 -0.5 -1.4 hypothetical protein compare
Atu6107 -0.5 -1.3 hypothetical protein compare
Atu2125 -0.5 -0.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4737 -0.5 -1.1 hypothetical protein compare
Atu2526 -0.5 -1.7 hypothetical protein compare
Atu2803 -0.5 -1.1 Cobalamin biosynthesis associated protein compare
Atu3809 -0.5 -1.8 oxidoreductase compare
Atu2274 -0.5 -2.7 cation efflux system protein compare
Atu0467 -0.5 -2.1 hypothetical protein compare
Atu0453 -0.5 -2.7 hypothetical protein compare
Atu4897 -0.5 -1.1 hypothetical protein compare
Atu5159 -0.5 -2.2 hypothetical protein compare
Atu8168 -0.5 -1.8 hypothetical protein compare
Atu3017 -0.5 -0.8 phosphoglyceromutase compare
Atu2343 -0.5 -1.6 acetyltransferase compare
Atu3634 -0.5 -2.3 penicillin-binding protein dacf precursor compare
Atu2662 -0.5 -0.9 acetyltransferase compare
Atu1057 -0.5 -1.3 ADP-Ribose Pyrophosphatase compare
Atu3482 -0.5 -2.0 pantoate--beta-alanine ligase compare
Atu4864 -0.5 -2.5 MarR family transcriptional regulator compare
Atu3488 -0.5 -2.4 ABC transporter permease compare
Atu4868 -0.5 -2.9 oxidoreductase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in r2a_control experiments