Experiment set49S161 for Pseudomonas putida KT2440

Compare to:

LB with 6-methoxy-2(3H)-benzoxazolone 2.5 mM

200 most important genes:

  gene name fitness t score description  
PP_4937 -3.9 -22.1 toluene tolerance protein compare
PP_0339 -2.9 -8.3 Pyruvate dehydrogenase E1 component compare
PP_1428 -2.9 -13.2 Sigma factor AlgU negative regulatory protein compare
PP_4994 -2.7 -1.9 conserved protein of unknown function compare
PP_1898 -2.7 -1.8 MotA/TolQ/ExbB proton channel family protein compare
PP_2820 -2.4 -2.2 HTH-type transcriptional regulator nfxB compare
PP_1384 -2.3 -14.7 Probable efflux pump outer membrane protein TtgC compare
PP_0345 -2.3 -12.3 putative Heptose kinase WapP compare
PP_0346 -2.1 -12.5 putative Heptose kinase WapQ compare
PP_2356 -2.1 -16.1 putative Phytochrome family protein compare
PP_4126 -2.1 -3.1 NADH-quinone oxidoreductase subunit I compare
PP_2402 -2.0 -5.4 putative Sensor histidine kinase compare
PP_4700 -2.0 -3.2 pantothenate synthetase compare
PP_1385 -1.9 -17.3 Probable efflux pump membrane transporter TtgB compare
PP_0691 -1.9 -3.4 Glutamate 5-kinase compare
PP_4342 -1.8 -5.1 flagellar synthesis regulator, putative ATPase compare
PP_0833 -1.8 -2.5 queuine tRNA-ribosyltransferase compare
PP_1386 -1.7 -12.2 Probable efflux pump periplasmic linker TtgA compare
PP_4902 -1.7 -2.2 Oligoribonuclease compare
PP_5329 -1.7 -2.3 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_2645 -1.7 -13.3 magnesium transporter, ATP-dependent compare
PP_4131 -1.7 -9.6 NADH-quinone oxidoreductase subunit N compare
PP_4804 -1.6 -2.4 RlpA-like lipoprotein compare
PP_4121 -1.6 -8.4 NADH-quinone oxidoreductase subunit C/D compare
PP_4723 -1.5 -4.4 Carbamoyl-phosphate synthase large chain compare
PP_3105 -1.5 -3.1 conserved membrane protein of unknown function compare
PP_4129 -1.5 -6.3 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1224 -1.4 -8.1 periplasmic subunit of the TolQRA transport system compare
PP_0846 -1.4 -3.1 DnaK-like molecular chaperone specific for IscU compare
PP_2354 -1.4 -11.3 Sensory box histidine kinase/response regulator compare
PP_4789 -1.4 -8.2 heat shock protein, Co2+ and Mg2+ efflux protein compare
PP_4895 -1.3 -2.1 tRNA dimethylallyltransferase compare
PP_4008 -1.3 -4.8 ATP-dependent serine protease compare
PP_4880 -1.3 -8.9 exoribonuclease R compare
PP_4120 -1.3 -5.7 NADH-quinone oxidoreductase subunit B compare
PP_4058 -1.3 -10.3 1,4-alpha-glucan branching enzyme compare
PP_5322 -1.2 -8.7 putative metal ion transporter compare
PP_2378 -1.2 -3.5 Fe/S biogenesis protein NfuA compare
PP_4130 -1.2 -6.1 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_0872 -1.2 -6.5 Peptide chain release factor 3 compare
PP_0959 -1.2 -4.5 phospholipid ABC transporter compare
PP_4124 -1.2 -6.3 NADH-quinone oxidoreductase subunit G compare
PP_1232 -1.1 -4.6 conserved exported protein of unknown function compare
PP_4098 -1.1 -2.7 UvrABC system protein C compare
PP_4999 -1.1 -0.7 dihydroorotase-like protein compare
PP_5216 -1.1 -2.4 exopolyphosphatase compare
PP_2379 -1.1 -4.9 putative cytochrome oxidase biogenesis protein compare
PP_4122 -1.1 -2.4 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_0719 -1.1 -1.8 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_4482 -1.1 -5.3 Transcriptional regulator, AraC family compare
PP_0063 -1.1 -4.4 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_4213 -1.1 -3.5 putative dipeptidase compare
PP_4836 -1.0 -4.3 conserved exported protein of unknown function compare
PP_0856 -1.0 -1.6 conserved lipoprotein of unknown function compare
PP_4892 -1.0 -6.7 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_4891 -1.0 -4.9 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_0958 -1.0 -6.1 phospholipid ABC transporter ATP-binding subunit compare
PP_0962 -1.0 -4.1 toluene-tolerance protein compare
PP_5084 -0.9 -8.1 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase compare
PP_4373 -0.9 -8.1 Transcriptional regulator FleQ compare
PP_2322 -0.9 -3.8 Major outer membrane lipoprotein compare
PP_4343 -0.9 -5.0 Flagellar biosynthesis protein FlhF compare
PP_1319 -0.9 -5.7 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_4835 -0.9 -1.7 conserved exported protein of unknown function compare
PP_4828 -0.9 -2.4 Precorrin-8X methylmutase compare
PP_3946 -0.9 -2.1 HTH-type transcriptional repressor NicR compare
PP_1318 -0.9 -5.9 Cytochrome b compare
PP_0164 -0.9 -4.9 conserved protein of unknown function compare
PP_5350 -0.9 -3.7 Transcriptional regulator, RpiR family compare
PP_2214 -0.9 -5.4 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PP_5310 -0.9 -5.7 junction-specific ATP-dependent DNA helicase compare
PP_1598 -0.8 -5.7 regulatory intramembrane protein RIP zinc protease compare
PP_1317 -0.8 -4.8 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PP_1187 -0.8 -5.3 sensor protein compare
PP_5028 -0.8 -4.5 proline iminopeptidase compare
PP_0435 -0.8 -4.7 Peptidase, M23/M37 family compare
PP_0961 -0.8 -5.6 toluene tolerance protein compare
PP_4004 -0.8 -4.1 DNA translocase FtsK compare
PP_0760 -0.8 -4.8 conserved membrane protein of unknown function compare
PP_2903 -0.8 -3.6 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_0834 -0.8 -1.9 Sec translocation complex subunit YajC compare
PP_4724 -0.8 -1.7 Carbamoyl-phosphate synthase small chain compare
PP_4320 -0.8 -4.8 cytochrome c-type biogenesis protein compare
PP_1325 -0.8 -6.6 putative lipoprotein compare
PP_5337 -0.8 -4.2 LysR family transcriptional regulator compare
PP_1128 -0.8 -2.3 OmpA family protein compare
PP_4475 -0.8 -4.9 succinylglutamate desuccinylase compare
PP_2217 -0.8 -4.6 enoyl-CoA hydratase compare
PP_5146 -0.8 -5.9 RNA pyrophosphohydrolase compare
PP_4386 -0.8 -4.7 flagellar basal-body rod protein FlgF compare
PP_1734 -0.8 -3.1 Probable septum site-determining protein MinC compare
PP_1763 -0.8 -4.0 putative oxidoreductase compare
PP_0127 -0.8 -3.2 Thiol:disulfide interchange protein compare
PP_1719 -0.7 -6.0 Tail-specific protease prc compare
PP_3819 -0.7 -5.3 glutathione reductase (NADPH) compare
PP_4390 -0.7 -5.8 flagellar basal-body rod protein FlgC compare
PP_0960 -0.7 -4.3 phospholipid ABC transporter binding protein compare
PP_0111 -0.7 -5.7 Electron transport protein SCO1/SenC compare
PP_0984 -0.7 -4.1 conserved membrane protein of unknown function compare
PP_0855 -0.7 -2.3 conserved protein of unknown function compare
PP_2144 -0.7 -3.3 Transcriptional regulator, TetR family compare
PP_2163 -0.7 -5.1 VacJ lipoprotein compare
PP_4546 -0.7 -3.7 ATP-dependent helicase HrpA compare
PP_4356 -0.7 -3.4 Flagellar protein FliO compare
PP_1214 -0.7 -2.0 putative transcriptional regulatory protein compare
PP_0852 -0.7 -3.9 Transcriptional regulator, Cro/CI family compare
PP_4391 -0.7 -5.4 flagellar basal-body rod protein FlgB compare
PP_4696 -0.7 -4.4 Nitrogen regulation protein NR(I) compare
PP_0888 -0.7 -1.7 Photosynthetic apparatus regulatory protein RegA compare
PP_1702 -0.7 -4.0 Recombination-associated protein RdgC compare
PP_4380 -0.7 -6.1 Flagellar hook-associated protein FlgL compare
PP_4944 -0.7 -2.4 Carbamoyltransferase compare
PP_4368 -0.7 -4.7 flagellar motor switch protein compare
PP_5393 -0.7 -1.5 putative metal-binding chaperone compare
PP_4570 -0.7 -6.0 conserved protein of unknown function compare
PP_4375 -0.7 -5.3 flagellar chaperone, inhibits premature FliC assembly compare
PP_4378 -0.7 -6.3 flagellin, filament structural protein compare
PP_1362 -0.7 -3.7 pyruvate kinase II compare
PP_4344 -0.6 -5.7 flagellar export pore protein compare
PP_5055 -0.6 -3.4 Sulfurtransferase compare
PP_1994 -0.6 -2.1 tRNA pseudouridine (38-40)synthase compare
PP_0484 -0.6 -3.6 transporter of an unknown substrate compare
PP_5022 -0.6 -1.5 Glutamine transport ATP-binding protein GlnQ compare
PP_4376 -0.6 -5.8 flagellar filament capping protein compare
PP_1629 -0.6 -4.7 Protein RecA compare
PP_3102 -0.6 -2.7 conserved protein of unknown function compare
PP_2597 -0.6 -4.1 conserved protein of unknown function compare
PP_1176 -0.6 -2.5 conserved protein of unknown function compare
PP_4265 -0.6 -1.7 DNA-binding transcriptional dual regulator compare
PP_3903 -0.6 -2.0 conserved protein of unknown function compare
PP_4261 -0.6 -3.9 cation-transporting P-type ATPase compare
PP_4388 -0.6 -5.7 Flagellar hook protein FlgE compare
PP_4993 -0.6 -2.7 Glutathione synthetase compare
PP_0513 -0.6 -3.1 DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP compare
PP_4904 -0.6 -4.5 Flagellar motor rotation protein compare
PP_4352 -0.6 -5.6 flagellin export apparatus, substrate specificity protein compare
PP_0125 -0.6 -3.1 putative cytochrome c-type protein compare
PP_0251 -0.6 -4.8 conserved membrane protein of unknown function compare
PP_3759 -0.6 -3.3 Methylesterase, CheB-like compare
PP_2302 -0.6 -3.5 DNA-binding, ATP-dependent protease compare
PP_4389 -0.6 -4.6 Flagellar basal-body rod modification protein FlgD compare
PP_3902 -0.6 -2.6 conserved protein of unknown function compare
PP_2000 -0.6 -1.3 amidophosphoribosyl transferase compare
PP_4381 -0.6 -5.4 Flagellar hook-associated protein FlgK compare
PP_4721 -0.6 -4.3 conserved membrane protein of unknown function compare
PP_4384 -0.6 -5.3 Flagellar L-ring protein compare
PP_0593 -0.6 -1.2 putative ribosome-binding factor compare
PP_4379 -0.6 -3.7 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_4396 -0.6 -3.2 conserved protein of unknown function compare
PP_4361 -0.6 -4.3 Flagellar hook-length control protein FliK compare
PP_4136 -0.6 -1.7 Transcriptional regulator, LuxR family compare
PP_2336 -0.6 -2.4 aconitate hydratase 1 compare
PP_4905 -0.6 -4.3 Flagellar motor rotation protein compare
PP_5309 -0.6 -4.2 oxidative and nitrosative stress transcriptional dual regulator compare
PP_0048 -0.6 -1.6 conserved protein of unknown function compare
PP_4066 -0.6 -2.2 methylglutaconyl-CoA hydratase compare
PP_5090 -0.6 -1.8 putative cell division protein compare
PP_4286 -0.6 -3.2 allantoinase compare
PP_4366 -0.5 -4.7 flagellum-specific ATP synthase compare
PP_5327 -0.5 -2.0 putative phosphate ABC transporter, permease subunit compare
PP_5014 -0.5 -2.0 Phosphoribosyl-AMP cyclohydrolase compare
PP_4369 -0.5 -4.6 Flagellar M-ring protein compare
PP_5162 -0.5 -3.2 conserved exported protein of unknown function compare
PP_4353 -0.5 -4.4 Flagellar biosynthetic protein fliR compare
PP_1646 -0.5 -2.5 putative Thioredoxin compare
PP_5546 -0.5 -1.4 conserved protein of unknown function compare
PP_3555 -0.5 -3.8 putative Transmembrane sensor compare
PP_1860 -0.5 -2.8 Organic hydroperoxide resistance transcriptional regulator compare
PP_4337 -0.5 -3.7 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon compare
PP_4859 -0.5 -3.0 Transcriptional regulator, TetR family compare
PP_4988 -0.5 -3.2 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_2944 -0.5 -4.4 Sensor histidine kinase compare
PP_4838 -0.5 -4.4 Outer membrane copper receptor OprC compare
PP_2945 -0.5 -4.1 putative sensor histidine kinase/response regulator compare
PP_4341 -0.5 -4.4 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons compare
PP_5267 -0.5 -2.2 putative cytochrome c5 compare
PP_4897 -0.5 -2.3 N-acetylmuramoyl-L-alanine amidase compare
PP_5100 -0.5 -2.3 dITP/XTP pyrophosphatase compare
PP_4394 -0.5 -4.0 flagella basal body P-ring formation protein compare
PP_0119 -0.5 -3.0 putative zinc uptake regulation protein ZUR compare
PP_2107 -0.5 -1.3 conserved protein of unknown function compare
PP_4358 -0.5 -3.7 flagellar synthesis, switching and energizing component compare
PP_4942 -0.5 -1.7 conserved protein of unknown function compare
PP_4211 -0.5 -3.3 outer membrane pyoverdine efflux protein compare
PP_2160 -0.5 -3.2 NADPH-dependent 7-cyano-7-deazaguanine reductase compare
PP_0126 -0.5 -2.2 Cytochrome c4 compare
PP_1204 -0.5 -3.8 putative Lipoprotein compare
PP_4989 -0.5 -2.3 Protein PilJ compare
PP_0757 -0.5 -3.8 conserved protein of unknown function compare
PP_0540 -0.5 -3.4 conserved inner membrane protein compare
PP_0832 -0.5 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_0166 -0.5 -4.5 HlyD family secretion protein compare
PP_5109 -0.5 -3.9 membrane component of the ABC transporter FtsEX involved in cellular division compare
PP_5051 -0.5 -2.5 conserved protein of unknown function compare
PP_4722 -0.5 -2.8 Transcription elongation factor GreA compare
PP_3649 -0.5 -2.1 Transcriptional regulator, GntR family compare
PP_4385 -0.5 -3.6 flagellar basal-body rod protein FlgG compare
PP_0165 -0.5 -4.5 GGDEF domain protein compare
PP_3473 -0.5 -1.9 curli secretion and assembly outer membrane associated component compare
PP_4370 -0.5 -3.6 Flagellar hook-basal body complex protein FliE compare


Specific Phenotypes

For 1 genes in this experiment

For stress 6-methoxy-2(3H)-benzoxazolone in Pseudomonas putida KT2440

For stress 6-methoxy-2(3H)-benzoxazolone across organisms