Experiment set49S153 for Pseudomonas putida KT2440

Compare to:

LB_noSalt with Sodium Chloride 250 mM

200 most important genes:

  gene name fitness t score description  
PP_0164 -2.3 -9.9 conserved protein of unknown function compare
PP_4723 -2.2 -3.3 Carbamoyl-phosphate synthase large chain compare
PP_4902 -2.0 -1.9 Oligoribonuclease compare
PP_4895 -1.8 -2.1 tRNA dimethylallyltransferase compare
PP_2645 -1.7 -14.1 magnesium transporter, ATP-dependent compare
PP_4700 -1.6 -2.9 pantothenate synthetase compare
PP_0719 -1.5 -2.2 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_4724 -1.4 -2.5 Carbamoyl-phosphate synthase small chain compare
PP_0339 -1.4 -5.1 Pyruvate dehydrogenase E1 component compare
PP_1493 -1.2 -3.5 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_4994 -1.2 -2.0 conserved protein of unknown function compare
PP_4880 -1.2 -8.1 exoribonuclease R compare
PP_0218 -1.1 -9.2 Sensory box protein compare
PP_4058 -1.1 -8.8 1,4-alpha-glucan branching enzyme compare
PP_4122 -1.1 -2.4 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_2646 -1.1 -2.6 conserved protein of unknown function compare
PP_0833 -1.1 -1.9 queuine tRNA-ribosyltransferase compare
PP_4126 -1.1 -2.7 NADH-quinone oxidoreductase subunit I compare
PP_2414 -1.1 -2.1 conserved exported protein of unknown function compare
PP_0856 -1.1 -1.4 conserved lipoprotein of unknown function compare
PP_0760 -1.0 -5.6 conserved membrane protein of unknown function compare
PP_0848 -1.0 -3.0 donor of Fe2+ and regulator of cysteine desulfurase activity compare
PP_4999 -1.0 -0.6 dihydroorotase-like protein compare
PP_5329 -0.9 -1.6 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_2378 -0.9 -2.8 Fe/S biogenesis protein NfuA compare
PP_2322 -0.9 -3.1 Major outer membrane lipoprotein compare
PP_0888 -0.9 -1.9 Photosynthetic apparatus regulatory protein RegA compare
PP_4121 -0.9 -5.2 NADH-quinone oxidoreductase subunit C/D compare
PP_2000 -0.8 -1.5 amidophosphoribosyl transferase compare
PP_0065 -0.8 -3.9 NAD-binding component of TrK potassium transporter compare
PP_4917 -0.8 -3.7 3',5'-cyclic-nucleotide phosphodiesterase compare
PP_4130 -0.8 -4.6 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_4937 -0.8 -6.3 toluene tolerance protein compare
PP_3519 -0.8 -2.0 putative Lipoprotein compare
PP_4379 -0.8 -4.6 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_2302 -0.8 -4.6 DNA-binding, ATP-dependent protease compare
PP_0691 -0.8 -1.8 Glutamate 5-kinase compare
PP_1318 -0.8 -5.4 Cytochrome b compare
PP_4008 -0.8 -2.9 ATP-dependent serine protease compare
PP_4120 -0.8 -3.5 NADH-quinone oxidoreductase subunit B compare
PP_5327 -0.8 -2.8 putative phosphate ABC transporter, permease subunit compare
PP_4129 -0.7 -3.6 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1912 -0.7 -4.0 Phosphate acyltransferase compare
PP_0872 -0.7 -5.2 Peptide chain release factor 3 compare
PP_2379 -0.7 -3.5 putative cytochrome oxidase biogenesis protein compare
PP_4720 -0.7 -3.1 putative RNA binding protein compare
PP_0775 -0.7 -1.3 conserved protein of unknown function compare
PP_1317 -0.7 -3.9 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PP_4131 -0.7 -4.4 NADH-quinone oxidoreductase subunit N compare
PP_1733 -0.7 -2.0 membrane ATPase of the MinC-MinD-MinE system compare
PP_2793 -0.7 -1.5 Acyl-CoA dehydrogenase family protein compare
PP_4726 -0.7 -1.7 Chaperone protein DnaJ compare
PP_2144 -0.7 -2.9 Transcriptional regulator, TetR family compare
PP_0001 -0.7 -1.5 probable chromosome-partitioning protein compare
PP_0959 -0.7 -1.9 phospholipid ABC transporter compare
PP_2280 -0.7 -2.5 conserved protein of unknown function compare
PP_4004 -0.6 -3.1 DNA translocase FtsK compare
PP_5331 -0.6 -2.1 Long-chain acyl-CoA thioester hydrolase compare
PP_2402 -0.6 -2.2 putative Sensor histidine kinase compare
PP_0914 -0.6 -5.1 GGDEF domain protein compare
PP_5310 -0.6 -3.9 junction-specific ATP-dependent DNA helicase compare
PP_4838 -0.6 -4.9 Outer membrane copper receptor OprC compare
PP_3903 -0.6 -1.8 conserved protein of unknown function compare
PP_0846 -0.6 -1.5 DnaK-like molecular chaperone specific for IscU compare
PP_1763 -0.6 -2.9 putative oxidoreductase compare
PP_4320 -0.6 -3.7 cytochrome c-type biogenesis protein compare
PP_1142 -0.6 -1.4 conserved protein of unknown function compare
PP_4993 -0.6 -2.3 Glutathione synthetase compare
PP_4989 -0.6 -2.6 Protein PilJ compare
PP_0984 -0.6 -3.4 conserved membrane protein of unknown function compare
PP_1598 -0.6 -3.0 regulatory intramembrane protein RIP zinc protease compare
PP_2087 -0.6 -1.9 CmpX protein compare
PP_1215 -0.6 -1.3 Crossover junction endodeoxyribonuclease RuvC compare
PP_1702 -0.5 -2.8 Recombination-associated protein RdgC compare
PP_5328 -0.5 -1.0 putative phosphate transport system permease protein compare
PP_1428 -0.5 -3.7 Sigma factor AlgU negative regulatory protein compare
PP_4696 -0.5 -3.4 Nitrogen regulation protein NR(I) compare
PP_1055 -0.5 -1.2 Type II secretion pathway protein GspN compare
PP_5748 -0.5 -1.7 cytochrome c heme lyase subunit compare
PP_0887 -0.5 -3.4 Sensor histidine kinase compare
PP_0832 -0.5 -2.2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_2217 -0.5 -2.6 enoyl-CoA hydratase compare
PP_2820 -0.5 -2.6 HTH-type transcriptional regulator nfxB compare
PP_1232 -0.5 -2.3 conserved exported protein of unknown function compare
PP_0957 -0.5 -2.1 D-arabinose 5-phosphate isomerase compare
PP_4988 -0.5 -2.9 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_4642 -0.5 -1.1 Cyclic diguanosine monophosphate-binding protein compare
PP_2945 -0.5 -3.5 putative sensor histidine kinase/response regulator compare
PP_5350 -0.5 -2.1 Transcriptional regulator, RpiR family compare
PP_5095 -0.5 -1.1 pyrroline-5-carboxylate reductase compare
PP_5295 -0.5 -1.5 conserved protein of unknown function compare
PP_0345 -0.5 -3.5 putative Heptose kinase WapP compare
PP_1362 -0.5 -2.7 pyruvate kinase II compare
PP_5063 -0.5 -2.9 betaine aldehyde dehydrogenase, NAD-dependent compare
PP_4475 -0.5 -3.3 succinylglutamate desuccinylase compare
PP_1319 -0.5 -3.0 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_0111 -0.5 -3.2 Electron transport protein SCO1/SenC compare
PP_4909 -0.5 -3.5 phosphoserine phosphatase compare
PP_1198 -0.5 -1.4 transcriptional regulator, Cro/CI family (higA antitoxin like) compare
PP_5014 -0.5 -1.9 Phosphoribosyl-AMP cyclohydrolase compare
PP_4879 -0.5 -2.2 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB compare
PP_1216 -0.5 -1.7 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_1609 -0.5 -1.9 conserved protein of unknown function compare
PP_1734 -0.4 -1.8 Probable septum site-determining protein MinC compare
PP_1629 -0.4 -3.1 Protein RecA compare
PP_1898 -0.4 -0.7 MotA/TolQ/ExbB proton channel family protein compare
PP_2944 -0.4 -3.8 Sensor histidine kinase compare
PP_4328 -0.4 -2.3 conserved protein of unknown function compare
PP_4482 -0.4 -2.3 Transcriptional regulator, AraC family compare
PP_1491 -0.4 -2.3 CheW domain protein compare
PP_0673 -0.4 -1.4 conserved protein of unknown function compare
PP_4369 -0.4 -3.3 Flagellar M-ring protein compare
PP_2903 -0.4 -1.6 peptidyl-prolyl cis-trans isomerase B (rotamase B) compare
PP_1713 -0.4 -1.0 Transcriptional regulator PcaQ compare
PP_4067 -0.4 -3.1 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha compare
PP_1623 -0.4 -2.7 RNA polymerase, sigma S (sigma 38) factor compare
PP_0949 -0.4 -2.6 putative ATP-binding protein UPF0042 compare
PP_4824 -0.4 -2.8 Sensor histidine kinase/response regulator compare
PP_2942 -0.4 -3.7 Response regulator compare
PP_3541 -0.4 -1.8 Transporter, MgtC family compare
PP_1892 -0.4 -2.1 conserved protein of unknown function compare
PP_2031 -0.4 -2.2 conserved protein of unknown function compare
PP_4098 -0.4 -1.2 UvrABC system protein C compare
PP_1523 -0.4 -1.6 conserved protein of unknown function compare
PP_4261 -0.4 -2.6 cation-transporting P-type ATPase compare
PP_4835 -0.4 -0.9 conserved exported protein of unknown function compare
PP_4671 -0.4 -2.2 conserved exported protein of unknown function compare
PP_3840 -0.4 -1.2 conserved protein of unknown function compare
PP_2345 -0.4 -1.2 conserved exported protein of unknown function compare
PP_5610 -0.4 -1.6 protein of unknown function compare
PP_1217 -0.4 -2.1 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_4251 -0.4 -2.1 cytochrome c oxidase subunit, cbb3-type compare
PP_4964 -0.4 -1.0 D-erythrose 4-phosphate dehydrogenase compare
PP_3946 -0.4 -1.2 HTH-type transcriptional repressor NicR compare
PP_0127 -0.4 -1.5 Thiol:disulfide interchange protein compare
PP_4693 -0.4 -1.5 RNA polymerase-binding transcription factor DksA compare
PP_3040 -0.4 -2.4 Pyocin R2_PP, holin compare
PP_4789 -0.4 -1.8 heat shock protein, Co2+ and Mg2+ efflux protein compare
PP_4268 -0.4 -0.8 nucleoid-associated broad specificity regulator compare
PP_5303 -0.4 -2.1 aminoacrylate/iminopropionate hydrolase/deaminase compare
PP_4124 -0.4 -2.3 NADH-quinone oxidoreductase subunit G compare
PP_0035 -0.4 -1.4 putative bactoprenol-linked glycose transferase compare
PP_1271 -0.4 -2.2 putative Multidrug efflux MFS transporter compare
PP_5294 -0.4 -2.7 Ribonuclease PH compare
PP_2504 -0.4 -1.1 putative tautomerase K2 compare
PP_2030 -0.4 -2.3 conserved protein of unknown function compare
PP_5216 -0.4 -0.8 exopolyphosphatase compare
PP_5162 -0.4 -2.2 conserved exported protein of unknown function compare
PP_3198 -0.4 -1.0 Ferredoxin, 2Fe-2S compare
PP_0683 -0.4 -1.0 conserved protein of unknown function compare
PP_0241 -0.4 -1.0 Transporter compare
PP_2907 -0.4 -1.5 DNA-binding response regulator compare
PP_0214 -0.4 -2.6 4-aminobutyrate aminotransferase compare
PP_1186 -0.4 -1.2 two component system DNA-binding transcriptional dual regulator compare
PP_3036 -0.4 -1.8 conserved protein of unknown function compare
PP_5198 -0.4 -1.8 conserved protein of unknown function compare
PP_2433 -0.4 -1.1 conserved protein of unknown function compare
PP_3938 -0.4 -0.6 conserved protein of unknown function compare
PP_4837 -0.4 -1.7 conserved protein of unknown function compare
PP_5446 -0.4 -2.2 protein of unknown function compare
PP_0346 -0.4 -2.9 putative Heptose kinase WapQ compare
PP_4832 -0.4 -2.1 Precorrin-6x reductase compare
PP_0484 -0.3 -2.4 transporter of an unknown substrate compare
PP_2090 -0.3 -1.9 Uroporphyrinogen-III C-methyltransferase compare
PP_4942 -0.3 -0.8 conserved protein of unknown function compare
PP_0750 -0.3 -2.2 conserved protein of unknown function compare
PP_4286 -0.3 -2.4 allantoinase compare
PP_1589 -0.3 -2.8 uridylyltransferase compare
PP_2943 -0.3 -2.7 putative Cytochrome c551 peroxidase compare
PP_4684 -0.3 -2.2 conserved protein of unknown function with kinase-like domain compare
PP_1783 -0.3 -1.0 dTDP-glucose pyrophosphorylase compare
PP_4370 -0.3 -2.1 Flagellar hook-basal body complex protein FliE compare
PP_0125 -0.3 -1.8 putative cytochrome c-type protein compare
PP_5139 -0.3 -1.9 cadmium translocating P-type ATPase compare
PP_1834 -0.3 -2.1 conserved protein of unknown function compare
PP_4359 -0.3 -2.8 Flagellar protein FliL compare
PP_4066 -0.3 -1.7 methylglutaconyl-CoA hydratase compare
PP_5575 -0.3 -1.4 conserved protein of unknown function compare
PP_0697 -0.3 -2.4 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_5298 -0.3 -1.9 putative glutamine amidotransferase compare
PP_2581 -0.3 -1.3 conserved protein of unknown function compare
PP_5352 -0.3 -3.0 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex compare
PP_2044 -0.3 -0.7 conserved inner membrane protein of unknown function compare
PP_1187 -0.3 -2.3 sensor protein compare
PP_4892 -0.3 -2.3 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_2028 -0.3 -2.0 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat compare
PP_0908 -0.3 -2.4 conserved exported protein of unknown function compare
PP_2769 -0.3 -1.9 putative Branched-chain amino acid ABC transporter, permease protein compare
PP_4546 -0.3 -1.7 ATP-dependent helicase HrpA compare
PP_2032 -0.3 -2.2 putative ATPase compare
PP_2181 -0.3 -1.9 Transcriptional regulator, Cro/CI family compare
PP_1447 -0.3 -1.7 conserved protein of unknown function compare
PP_2573 -0.3 -1.9 conserved protein of unknown function compare
PP_5084 -0.3 -2.7 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase compare
PP_1935 -0.3 -1.3 Transcriptional regulator, Cro/CI family compare
PP_4009 -0.3 -1.1 ATP-dependent Clp protease adapter protein ClpS compare
PP_1036 -0.3 -2.6 membrane-bound lytic murein transglycosylase F compare
PP_4150 -0.3 -2.0 microcin C transporter - ATP binding subunit compare
PP_1646 -0.3 -1.2 putative Thioredoxin compare
PP_4358 -0.3 -2.3 flagellar synthesis, switching and energizing component compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in stress experiments

For stress Sodium Chloride across organisms