Experiment set49S151 for Pseudomonas putida KT2440

Compare to:

LB 37C

200 most important genes:

  gene name fitness t score description  
PP_0833 -1.8 -2.3 queuine tRNA-ribosyltransferase compare
PP_2645 -1.7 -13.3 magnesium transporter, ATP-dependent compare
PP_4902 -1.7 -1.9 Oligoribonuclease compare
PP_0846 -1.5 -2.9 DnaK-like molecular chaperone specific for IscU compare
PP_4880 -1.3 -9.1 exoribonuclease R compare
PP_2378 -1.3 -3.8 Fe/S biogenesis protein NfuA compare
PP_4700 -1.3 -2.4 pantothenate synthetase compare
PP_0164 -1.3 -7.3 conserved protein of unknown function compare
PP_1430 -1.2 -9.2 putative periplasmic serine endoprotease DegP-like compare
PP_4008 -1.2 -4.0 ATP-dependent serine protease compare
PP_4937 -1.2 -8.8 toluene tolerance protein compare
PP_2646 -1.2 -5.2 conserved protein of unknown function compare
PP_0339 -1.2 -4.5 Pyruvate dehydrogenase E1 component compare
PP_1733 -1.1 -3.0 membrane ATPase of the MinC-MinD-MinE system compare
PP_4122 -1.1 -2.5 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_4836 -1.1 -4.0 conserved exported protein of unknown function compare
PP_1912 -1.1 -6.0 Phosphate acyltransferase compare
PP_4895 -1.0 -1.7 tRNA dimethylallyltransferase compare
PP_2322 -1.0 -3.8 Major outer membrane lipoprotein compare
PP_4789 -1.0 -5.3 heat shock protein, Co2+ and Mg2+ efflux protein compare
PP_4131 -1.0 -6.1 NADH-quinone oxidoreductase subunit N compare
PP_0856 -1.0 -1.3 conserved lipoprotein of unknown function compare
PP_4126 -1.0 -2.5 NADH-quinone oxidoreductase subunit I compare
PP_4726 -0.9 -2.0 Chaperone protein DnaJ compare
PP_4058 -0.9 -7.3 1,4-alpha-glucan branching enzyme compare
PP_4124 -0.9 -5.1 NADH-quinone oxidoreductase subunit G compare
PP_4997 -0.9 -2.9 pyrimidine operon regulatory protein/uracil phosphoribosyltransferase compare
PP_5322 -0.9 -5.6 putative metal ion transporter compare
PP_1493 -0.9 -4.0 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_0406 -0.9 -2.6 Nucleotidyltransferase family protein compare
PP_5183 -0.8 -4.1 glutamylpolyamine synthetase compare
PP_1428 -0.8 -5.5 Sigma factor AlgU negative regulatory protein compare
PP_4129 -0.8 -4.0 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1097 -0.8 -2.0 Methionine--tRNA ligase compare
PP_3519 -0.8 -2.0 putative Lipoprotein compare
PP_1317 -0.8 -4.1 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PP_4804 -0.8 -1.5 RlpA-like lipoprotein compare
PP_4320 -0.7 -4.5 cytochrome c-type biogenesis protein compare
PP_1366 -0.7 -1.8 Transcriptional regulator MvaT, P16 subunit compare
PP_2820 -0.7 -2.3 HTH-type transcriptional regulator nfxB compare
PP_1142 -0.7 -1.6 conserved protein of unknown function compare
PP_1763 -0.7 -3.5 putative oxidoreductase compare
PP_4723 -0.7 -2.4 Carbamoyl-phosphate synthase large chain compare
PP_t29 -0.7 -2.0 tRNA-Ala compare
PP_4261 -0.7 -3.3 cation-transporting P-type ATPase compare
PP_5393 -0.7 -1.9 putative metal-binding chaperone compare
PP_2402 -0.7 -2.4 putative Sensor histidine kinase compare
PP_4724 -0.7 -1.5 Carbamoyl-phosphate synthase small chain compare
PP_3759 -0.7 -3.3 Methylesterase, CheB-like compare
PP_4268 -0.7 -1.6 nucleoid-associated broad specificity regulator compare
PP_1554 -0.7 -2.5 conserved protein of unknown function compare
PP_4121 -0.6 -4.1 NADH-quinone oxidoreductase subunit C/D compare
PP_1214 -0.6 -2.5 putative transcriptional regulatory protein compare
PP_5327 -0.6 -2.6 putative phosphate ABC transporter, permease subunit compare
PP_2144 -0.6 -2.8 Transcriptional regulator, TetR family compare
PP_0888 -0.6 -1.5 Photosynthetic apparatus regulatory protein RegA compare
PP_5073 -0.6 -1.7 conserved exported protein of unknown function compare
PP_0949 -0.6 -3.7 putative ATP-binding protein UPF0042 compare
PP_4879 -0.6 -3.4 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB compare
PP_4696 -0.6 -4.3 Nitrogen regulation protein NR(I) compare
PP_1215 -0.6 -0.8 Crossover junction endodeoxyribonuclease RuvC compare
PP_4917 -0.6 -3.0 3',5'-cyclic-nucleotide phosphodiesterase compare
PP_3649 -0.6 -2.4 Transcriptional regulator, GntR family compare
PP_2145 -0.6 -2.8 beta-N-acetylglucosaminidase compare
PP_2000 -0.6 -1.3 amidophosphoribosyl transferase compare
PP_3916 -0.6 -2.2 conserved protein of unknown function compare
PP_0959 -0.6 -1.8 phospholipid ABC transporter compare
PP_5267 -0.6 -2.4 putative cytochrome c5 compare
PP_1702 -0.6 -3.5 Recombination-associated protein RdgC compare
PP_0111 -0.6 -4.4 Electron transport protein SCO1/SenC compare
PP_4130 -0.6 -3.4 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_1734 -0.6 -2.0 Probable septum site-determining protein MinC compare
PP_4482 -0.6 -2.4 Transcriptional regulator, AraC family compare
PP_0218 -0.6 -4.6 Sensory box protein compare
PP_1319 -0.6 -3.4 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_1318 -0.6 -3.8 Cytochrome b compare
PP_2217 -0.6 -2.2 enoyl-CoA hydratase compare
PP_0434 -0.6 -3.1 Anhydro-N-acetylmuramic acid kinase compare
PP_4009 -0.5 -2.4 ATP-dependent Clp protease adapter protein ClpS compare
PP_2214 -0.5 -3.1 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PP_4994 -0.5 -1.1 conserved protein of unknown function compare
PP_0593 -0.5 -1.0 putative ribosome-binding factor compare
PP_0126 -0.5 -2.6 Cytochrome c4 compare
PP_0625 -0.5 -4.2 Chaperone protein ClpB compare
PP_4179 -0.5 -4.4 Chaperone protein HtpG compare
PP_0962 -0.5 -2.5 toluene-tolerance protein compare
PP_2942 -0.5 -4.5 Response regulator compare
PP_2029 -0.5 -2.0 von Willebrand factor type A domain protein compare
PP_1054 -0.5 -1.6 Type II secretion pathway protein XcpZ compare
PP_1232 -0.5 -2.3 conserved exported protein of unknown function compare
PP_4814 -0.5 -2.3 ATP-dependent protease La domain protein compare
PP_5295 -0.5 -2.3 conserved protein of unknown function compare
PP_4988 -0.5 -2.7 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_4286 -0.5 -3.5 allantoinase compare
PP_4989 -0.5 -2.7 Protein PilJ compare
PP_4136 -0.5 -1.4 Transcriptional regulator, LuxR family compare
PP_2341 -0.5 -2.0 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
PP_0832 -0.5 -1.8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_3555 -0.5 -3.5 putative Transmembrane sensor compare
PP_1224 -0.5 -3.1 periplasmic subunit of the TolQRA transport system compare
PP_4356 -0.5 -2.9 Flagellar protein FliO compare
PP_0691 -0.5 -1.2 Glutamate 5-kinase compare
PP_0484 -0.5 -2.6 transporter of an unknown substrate compare
PP_5014 -0.5 -1.7 Phosphoribosyl-AMP cyclohydrolase compare
PP_2379 -0.5 -2.4 putative cytochrome oxidase biogenesis protein compare
PP_2944 -0.5 -3.7 Sensor histidine kinase compare
PP_0127 -0.5 -2.0 Thiol:disulfide interchange protein compare
PP_2280 -0.5 -1.9 conserved protein of unknown function compare
PP_4642 -0.5 -1.1 Cyclic diguanosine monophosphate-binding protein compare
PP_0087 -0.5 -1.4 conserved exported protein of unknown function compare
PP_4593 -0.5 -1.7 conserved protein of unknown function compare
PP_1729 -0.5 -1.8 conserved protein of unknown function compare
PP_5594 -0.5 -0.6 conserved protein of unknown function compare
PP_5028 -0.5 -2.5 proline iminopeptidase compare
PP_1646 -0.5 -1.9 putative Thioredoxin compare
PP_4358 -0.5 -3.2 flagellar synthesis, switching and energizing component compare
PP_2907 -0.5 -2.1 DNA-binding response regulator compare
PP_4120 -0.5 -2.0 NADH-quinone oxidoreductase subunit B compare
PP_1714 -0.5 -2.5 FKBP-type peptidyl-prolyl cis-trans isomerase compare
PP_3946 -0.4 -1.1 HTH-type transcriptional repressor NicR compare
PP_0738 -0.4 -1.8 conserved protein of unknown function compare
PP_4369 -0.4 -3.6 Flagellar M-ring protein compare
PP_0123 -0.4 -3.3 DNA polymerase I, 5 compare
PP_1293 -0.4 -0.9 molybdopterin synthase small subunit compare
PP_2313 -0.4 -1.4 conserved membrane protein of unknown function compare
PP_0914 -0.4 -3.6 GGDEF domain protein compare
PP_0984 -0.4 -2.2 conserved membrane protein of unknown function compare
PP_4207 -0.4 -1.7 conserved protein of unknown function compare
PP_4835 -0.4 -1.3 conserved exported protein of unknown function compare
PP_1834 -0.4 -2.7 conserved protein of unknown function compare
PP_0566 -0.4 -1.0 translation-related factor compare
PP_1374 -0.4 -2.2 conserved protein of unknown function compare
PP_4259 -0.4 -3.3 Iron-sulfur cluster-binding protein compare
PP_0905 -0.4 -0.7 conserved exported protein of unknown function compare
PP_5162 -0.4 -2.5 conserved exported protein of unknown function compare
PP_0908 -0.4 -3.3 conserved exported protein of unknown function compare
PP_2899 -0.4 -1.1 conserved exported protein of unknown function compare
PP_4891 -0.4 -2.3 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_4375 -0.4 -3.2 flagellar chaperone, inhibits premature FliC assembly compare
PP_3484 -0.4 -2.2 Response regulator receiver protein compare
PP_3899 -0.4 -2.0 conserved protein of unknown function, hicB family compare
PP_4892 -0.4 -2.8 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_1764 -0.4 -1.5 Phosphoglycolate phosphatase 2 compare
PP_1128 -0.4 -1.4 OmpA family protein compare
PP_1055 -0.4 -0.9 Type II secretion pathway protein GspN compare
PP_2403 -0.4 -1.5 Chemotaxis protein CheY compare
PP_1826 -0.4 -2.2 Hydrolase, isochorismatase family compare
PP_4250 -0.4 -3.2 cytochrome c oxidase subunit I, cbb3-type compare
PP_5339 -0.4 -2.5 transcriptional regulator, ornithine utilization compare
PP_0345 -0.4 -2.3 putative Heptose kinase WapP compare
PP_4581 -0.4 -1.1 putative amidotransferase compare
PP_3862 -0.4 -2.1 putative Phage assembly protein compare
PP_2442 -0.4 -1.6 conserved protein of unknown function, DUF480 family compare
PP_1548 -0.4 -1.8 conserved protein of unknown function compare
PP_2456 -0.4 -2.5 D-ribose ABC transporter - permease subunit compare
PP_t11 -0.4 -1.7 tRNA-Lys compare
PP_4378 -0.4 -3.7 flagellin, filament structural protein compare
PP_5022 -0.4 -1.1 Glutamine transport ATP-binding protein GlnQ compare
PP_4143 -0.4 -2.3 conserved protein of unknown function compare
PP_5008 -0.4 -1.1 Poly granule-associated protein compare
PP_2718 -0.4 -1.4 arsenic resistance transcriptional regulator compare
PP_0980 -0.4 -2.8 Probable cytosol aminopeptidase compare
PP_5110 -0.4 -1.2 cytokinetic ring ABC transporter-like subunit - ATP-binding subunit compare
PP_4966 -0.4 -1.4 transcriptional regulator of methionine metabolism compare
PP_0919 -0.4 -1.6 conserved protein of unknown function compare
PP_0627 -0.4 -1.4 conserved protein of unknown function compare
PP_1673 -0.4 -2.0 cobyrinate a,c-diamide synthase compare
PP_2414 -0.4 -1.0 conserved exported protein of unknown function compare
PP_0697 -0.4 -2.4 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_4359 -0.4 -3.0 Flagellar protein FliL compare
PP_4065 -0.4 -3.0 methylcrotonyl-CoA carboxylase biotin-containing subunit beta compare
PP_1513 -0.4 -1.2 Ribosomal RNA small subunit methyltransferase J compare
PP_4828 -0.4 -0.7 Precorrin-8X methylmutase compare
PP_5310 -0.4 -2.7 junction-specific ATP-dependent DNA helicase compare
PP_4379 -0.4 -2.3 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_4368 -0.4 -3.0 flagellar motor switch protein compare
PP_2581 -0.4 -1.1 conserved protein of unknown function compare
PP_3409 -0.4 -1.4 putative Cobalamin biosynthesis protein cobE compare
PP_5633 -0.4 -1.7 conserved protein of unknown function compare
PP_3359 -0.4 -1.7 putative Hydroxycinnamic acid degradation regulator compare
PP_0855 -0.4 -1.2 conserved protein of unknown function compare
PP_4355 -0.4 -1.3 flagellar export apparatus subunit compare
PP_3064 -0.4 -1.3 Phage tail protein compare
PP_4477 -0.4 -2.7 N-succinylarginine dihydrolase compare
PP_4285 -0.4 -1.9 5-hydroxyisourate hydrolase compare
PP_0910 -0.4 -2.7 conserved exported protein of unknown function compare
PP_2429 -0.4 -0.9 putative Membrane protein compare
PP_2002 -0.4 -1.8 putative enzyme compare
PP_3333 -0.4 -1.9 conserved protein of unknown function compare
PP_4897 -0.4 -1.4 N-acetylmuramoyl-L-alanine amidase compare
PP_4380 -0.4 -3.2 Flagellar hook-associated protein FlgL compare
PP_4699 -0.4 -1.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_1999 -0.4 -1.5 membrane protein required for colicin V production compare
PP_0393 -0.4 -1.2 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_0758 -0.4 -2.3 conserved protein of unknown function compare
PP_4362 -0.4 -2.0 conserved protein of unknown function compare
PP_4004 -0.4 -1.6 DNA translocase FtsK compare
PP_4366 -0.4 -3.0 flagellum-specific ATP synthase compare
PP_0405 -0.4 -2.6 conserved protein of unknown function compare
PP_5198 -0.3 -1.9 conserved protein of unknown function compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments