| | gene | name | fitness | t score | description | |
|---|
| b0990 | cspG | -3.4 | -2.3 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4242 | mgtA | -3.3 | -10.6 | magnesium transporter (NCBI) | compare |
| b4685 | yrbN | -2.3 | -5.0 | expressed protein (RefSeq) | compare |
| b3162 | deaD | -2.2 | -6.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3261 | fis | -2.0 | -3.2 | DNA-binding protein Fis (NCBI) | compare |
| b1130 | phoP | -2.0 | -1.3 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2318 | truA | -2.0 | -4.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0439 | lon | -1.9 | -6.1 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2498 | upp | -1.9 | -4.0 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b4146 | yjeK | -1.8 | -2.7 | predicted lysine aminomutase (NCBI) | compare |
| b3082 | ygjM | -1.8 | -3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1176 | minC | -1.7 | -4.3 | septum formation inhibitor (NCBI) | compare |
| b1861 | ruvA | -1.7 | -2.0 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b2830 | nudH | -1.7 | -2.5 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2528 | iscA | -1.6 | -3.0 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0145 | dksA | -1.6 | -3.9 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4593 | ymgI | -1.4 | -1.3 | hypothetical protein (RefSeq) | compare |
| b0630 | lipB | -1.4 | -1.3 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4577 | sgrS | -1.4 | -3.1 | small antisense RNA (NCBI) | compare |
| b3164 | pnp | -1.4 | -1.9 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3199 | yrbK | -1.4 | -3.1 | hypothetical protein (NCBI) | compare |
| b2567 | rnc | -1.4 | -1.2 | ribonuclease III (NCBI) | compare |
| b4699 | fnrS | -1.4 | -1.2 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3726 | pstA | -1.4 | -5.1 | phosphate transporter subunit (NCBI) | compare |
| b4529 | ydbJ | -1.3 | -1.8 | hypothetical protein (NCBI) | compare |
| b1175 | minD | -1.3 | -4.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3021 | ygiT | -1.3 | -2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3613 | yibP | -1.3 | -4.6 | putative membrane protein (VIMSS) | compare |
| b1950 | fliR | -1.3 | -3.9 | flagellar biosynthesis protein R (NCBI) | compare |
| b3469 | zntA | -1.2 | -6.8 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0357 | yaiN | -1.2 | -1.8 | putative alpha helix chain (VIMSS) | compare |
| b3183 | obgE | -1.2 | -1.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1103 | ycfF | -1.2 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4702 | mgtL | -1.2 | -1.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3916 | pfkA | -1.2 | -2.9 | 6-phosphofructokinase (NCBI) | compare |
| b0263 | afuB | -1.2 | -1.6 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b1882 | cheY | -1.1 | -0.6 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2808 | gcvA | -1.1 | -3.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0740 | tolB | -1.1 | -4.2 | translocation protein TolB precursor (NCBI) | compare |
| b3778 | rep | -1.1 | -6.5 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3405 | ompR | -1.1 | -4.2 | osmolarity response regulator (NCBI) | compare |
| b2935 | tktA | -1.1 | -2.0 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3962 | udhA | -1.1 | -4.4 | putative oxidoreductase (VIMSS) | compare |
| b3642 | pyrE | -1.1 | -4.4 | orotate phosphoribosyltransferase (NCBI) | compare |
| b3761 | trpT | -1.1 | -1.6 | tRNA-Trp (NCBI) | compare |
| b1192 | ldcA | -1.1 | -4.3 | L,D-carboxypeptidase A (NCBI) | compare |
| b2504 | yfgG | -1.1 | -1.2 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b0014 | dnaK | -1.0 | -2.5 | molecular chaperone DnaK (NCBI) | compare |
| b4202 | rpsR | -1.0 | -1.3 | 30S ribosomal protein S18 (NCBI) | compare |
| b3414 | gntY | -1.0 | -4.2 | predicted gluconate transport associated protein (NCBI) | compare |
| b2297 | pta | -1.0 | -0.7 | phosphate acetyltransferase (NCBI) | compare |
| b2822 | recC | -1.0 | -4.3 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2699 | recA | -1.0 | -1.2 | recombinase A (NCBI) | compare |
| b1346 | ydaQ | -1.0 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0881 | clpS | -1.0 | -2.3 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b3728 | pstS | -1.0 | -2.0 | phosphate transporter subunit (NCBI) | compare |
| b0683 | fur | -1.0 | -1.7 | ferric uptake regulator (NCBI) | compare |
| b2894 | xerD | -1.0 | -1.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4414 | tff | -1.0 | -1.5 | unknown RNA (NCBI) | compare |
| b3198 | kdsC | -1.0 | -2.1 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2934 | cmtB | -1.0 | -0.9 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b3889 | yiiE | -1.0 | -1.9 | predicted transcriptional regulator (RefSeq) | compare |
| b3636 | rpmG | -1.0 | -1.1 | 50S ribosomal protein L33 (NCBI) | compare |
| b2330 | yfcB | -1.0 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b1129 | phoQ | -1.0 | -0.9 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b4520 | ymgF | -0.9 | -1.5 | hypothetical protein (NCBI) | compare |
| b3609 | secB | -0.9 | -2.2 | export protein SecB (NCBI) | compare |
| b2912 | ygfA | -0.9 | -2.7 | putative ligase (VIMSS) | compare |
| b3811 | xerC | -0.9 | -1.8 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4509 | ylcG | -0.9 | -2.6 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2688 | gshA | -0.9 | -5.0 | glutamate--cysteine ligase (NCBI) | compare |
| b1025 | ycdT | -0.9 | -1.5 | predicted diguanylate cyclase (NCBI) | compare |
| b1196 | ycgY | -0.9 | -2.6 | hypothetical protein (NCBI) | compare |
| b0949 | uup | -0.9 | -5.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4239 | treC | -0.9 | -1.4 | trehalose-6-P hydrolase (NCBI) | compare |
| b3237 | argR | -0.9 | -3.3 | arginine repressor (NCBI) | compare |
| b4631 | ykgQ | -0.9 | -1.7 | no description | compare |
| b1505 | ydeT | -0.9 | -1.2 | hypothetical protein (RefSeq) | compare |
| b2501 | ppk | -0.8 | -5.4 | polyphosphate kinase (NCBI) | compare |
| b1257 | yciE | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b1827 | kdgR | -0.8 | -2.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3463 | ftsE | -0.8 | -1.2 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b3341 | rpsG | -0.8 | -0.9 | 30S ribosomal protein S7 (NCBI) | compare |
| b2820 | recB | -0.8 | -1.3 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1579 | intQ | -0.8 | -2.4 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b1613 | manA | -0.8 | -1.5 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2947 | gshB | -0.8 | -2.8 | glutathione synthetase (NCBI) | compare |
| b1860 | ruvB | -0.8 | -0.7 | Holliday junction DNA helicase B (NCBI) | compare |
| b1712 | ihfA | -0.8 | -1.4 | integration host factor subunit alpha (NCBI) | compare |
| b3443 | yrhA | -0.8 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | -0.8 | -1.4 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4595 | yciY | -0.8 | -1.8 | hypothetical protein (RefSeq) | compare |
| b3390 | aroK | -0.8 | -1.5 | shikimate kinase I (NCBI) | compare |
| b3292 | zntR | -0.8 | -2.1 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b0623 | cspE | -0.8 | -1.7 | cold shock protein E (NCBI) | compare |
| b1551 | b1551 | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -0.8 | -2.5 | S-adenosyl-methyltransferase (NCBI) | compare |
| b3706 | trmE | -0.7 | -3.1 | tRNA modification GTPase (NCBI) | compare |
| b4402 | yjjY | -0.7 | -0.7 | hypothetical protein (NCBI) | compare |
| b4552 | yrhC | -0.7 | -0.7 | no description | compare |
| b3741 | gidA | -0.7 | -2.8 | glucose-inhibited division protein A (NCBI) | compare |
| b1409 | ynbB | -0.7 | -0.8 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b2448 | yffQ | -0.7 | -3.1 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1920 | fliY | -0.7 | -1.9 | cystine transporter subunit (NCBI) | compare |
| b0015 | dnaJ | -0.7 | -5.0 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b2329 | aroC | -0.7 | -3.1 | chorismate synthase (NCBI) | compare |
| b1676 | pykF | -0.7 | -3.1 | pyruvate kinase (NCBI) | compare |
| b1992 | cobS | -0.7 | -2.0 | cobalamin synthase (NCBI) | compare |
| b4535 | yniD | -0.7 | -1.2 | predicted protein (RefSeq) | compare |
| b4416 | rybA | -0.7 | -1.2 | unknown RNA (NCBI) | compare |
| b3623 | rfaK | -0.7 | -1.3 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b0232 | yafN | -0.7 | -0.5 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1143 | ymfI | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4410 | ecnA | -0.7 | -1.1 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1778 | yeaA | -0.7 | -1.4 | methionine sulfoxide reductase B (NCBI) | compare |
| b4647 | mokA | -0.7 | -0.8 | no description | compare |
| b1347 | ydaC | -0.7 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b4505 | insX | -0.7 | -1.4 | predicted IS protein (RefSeq) | compare |
| b1573 | ydfC | -0.7 | -1.5 | Qin prophage; predicted protein (RefSeq) | compare |
| b4458 | oxyS | -0.7 | -1.0 | global regulatory RNA (NCBI) | compare |
| b4522 | yciX_1 | -0.7 | -2.0 | hypothetical protein (NCBI) | compare |
| b1269 | rluB | -0.7 | -3.4 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3629 | rfaS | -0.7 | -2.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4234 | yjgA | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b1434 | ydcN | -0.7 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0953 | rmf | -0.7 | -1.6 | ribosome modulation factor (NCBI) | compare |
| b1040 | csgD | -0.7 | -0.9 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1595 | ynfL | -0.7 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1351 | racC | -0.7 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b3977 | tyrU | -0.7 | -0.7 | tRNA-Tyr (NCBI) | compare |
| b1727 | yniC | -0.7 | -1.6 | predicted hydrolase (NCBI) | compare |
| b0097 | yacA | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3611 | yibN | -0.6 | -2.3 | predicted rhodanese-related sulfurtransferase (NCBI) | compare |
| b3764 | yifE | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| b3780 | rhlB | -0.6 | -4.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b1187 | fadR | -0.6 | -2.1 | fatty acid metabolism regulator (NCBI) | compare |
| b1121 | ycfZ | -0.6 | -1.1 | predicted inner membrane protein (NCBI) | compare |
| b0535 | fimZ | -0.6 | -2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1281 | pyrF | -0.6 | -2.3 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b1090 | plsX | -0.6 | -2.7 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b1088 | yceD | -0.6 | -2.1 | hypothetical protein (NCBI) | compare |
| b1865 | nudB | -0.6 | -1.1 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1333 | uspE | -0.6 | -2.0 | stress-induced protein (NCBI) | compare |
| b4172 | hfq | -0.6 | -0.4 | RNA-binding protein Hfq (NCBI) | compare |
| b4163 | glyV | -0.6 | -1.0 | tRNA-Gly (NCBI) | compare |
| b4179 | vacB | -0.6 | -3.1 | putative enzyme (VIMSS) | compare |
| b0647 | ybeT | -0.6 | -3.4 | conserved outer membrane protein (NCBI) | compare |
| b3260 | dusB | -0.6 | -3.4 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b3625 | rfaY | -0.6 | -2.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b0049 | apaH | -0.6 | -1.7 | diadenosinetetraphosphatase (NCBI) | compare |
| b0051 | ksgA | -0.6 | -2.7 | dimethyladenosine transferase (NCBI) | compare |
| b4096 | phnL | -0.6 | -2.1 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b1977 | asnT | -0.6 | -2.0 | tRNA-Asn (NCBI) | compare |
| b3792 | wzxE | -0.6 | -3.3 | O-antigen translocase (NCBI) | compare |
| b1304 | pspA | -0.6 | -1.9 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b1773 | ydjI | -0.6 | -1.3 | predicted aldolase (NCBI) | compare |
| b3806 | cyaA | -0.6 | -2.8 | adenylate cyclase (NCBI) | compare |
| b2477 | nlpB | -0.6 | -1.3 | lipoprotein-34 (VIMSS) | compare |
| b3101 | yqjF | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0463 | acrA | -0.6 | -4.2 | multidrug efflux system (NCBI) | compare |
| b3026 | qseC | -0.6 | -2.2 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1969 | yedW | -0.6 | -2.6 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b3781 | trxA | -0.6 | -2.2 | thioredoxin 1 (VIMSS) | compare |
| b2263 | yfbB | -0.6 | -1.9 | predicted peptidase (NCBI) | compare |
| b2419 | yfeK | -0.6 | -1.6 | hypothetical protein (NCBI) | compare |
| b4695 | ykgT | -0.6 | -0.9 | no description | compare |
| b0467 | priC | -0.6 | -3.2 | primosomal replication protein N'' (NCBI) | compare |
| b1086 | rluC | -0.6 | -3.0 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b3858 | yihD | -0.6 | -1.9 | hypothetical protein (NCBI) | compare |
| b1785 | yeaI | -0.6 | -1.6 | predicted diguanylate cyclase (NCBI) | compare |
| b0632 | dacA | -0.6 | -3.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1363 | trkG | -0.6 | -0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b3652 | recG | -0.6 | -3.4 | ATP-dependent DNA helicase (NCBI) | compare |
| b2168 | fruK | -0.5 | -0.6 | 1-phosphofructokinase (NCBI) | compare |
| b1612 | fumA | -0.5 | -2.7 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b0436 | tig | -0.5 | -3.6 | trigger factor (NCBI) | compare |
| b3387 | dam | -0.5 | -4.2 | DNA adenine methylase (NCBI) | compare |
| b2814 | metZ | -0.5 | -1.0 | tRNA-Met (NCBI) | compare |
| b4513 | kdpF | -0.5 | -1.6 | potassium ion accessory transporter subunit (NCBI) | compare |
| b1871 | yecP | -0.5 | -2.4 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2466 | ypfG | -0.5 | -2.8 | hypothetical protein (NCBI) | compare |
| b1183 | umuD | -0.5 | -0.8 | DNA polymerase V, subunit D (NCBI) | compare |
| b4614 | sokA | -0.5 | -1.4 | no description | compare |
| b0462 | acrB | -0.5 | -4.5 | multidrug efflux system protein (NCBI) | compare |
| b1504 | ydeS | -0.5 | -2.7 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1567 | intK | -0.5 | -1.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b1671 | ydhX | -0.5 | -1.3 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b2754 | ygbF | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2569 | lepA | -0.5 | -2.1 | GTP-binding protein LepA (NCBI) | compare |
| b4191 | ulaR | -0.5 | -2.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1104 | ycfL | -0.5 | -0.9 | hypothetical protein (NCBI) | compare |
| b2859 | ygeO | -0.5 | -1.2 | hypothetical protein (RefSeq) | compare |
| b1669 | ydhT | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b1382 | ynbE | -0.5 | -1.0 | predicted lipoprotein (NCBI) | compare |
| b4045 | yjbJ | -0.5 | -1.1 | predicted stress response protein (NCBI) | compare |
| b0658 | ybeX | -0.5 | -0.3 | predicteed ion transport (NCBI) | compare |
| b3644 | yicC | -0.5 | -2.8 | hypothetical protein (NCBI) | compare |
| b1677 | lpp | -0.5 | -1.3 | murein lipoprotein (NCBI) | compare |
| b0310 | ykgH | -0.5 | -0.6 | predicted inner membrane protein (NCBI) | compare |
| b0161 | degP | -0.5 | -2.5 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |