| | gene | name | fitness | t score | description | |
|---|
| b1830 | prc | -5.1 | -10.3 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3839 | tatC | -3.5 | -12.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2567 | rnc | -3.3 | -2.3 | ribonuclease III (NCBI) | compare |
| b4402 | yjjY | -3.0 | -2.2 | hypothetical protein (NCBI) | compare |
| b0438 | clpX | -2.7 | -9.7 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0437 | clpP | -2.7 | -8.8 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4552 | yrhC | -2.5 | -1.6 | no description | compare |
| b3613 | yibP | -2.5 | -7.9 | putative membrane protein (VIMSS) | compare |
| b1236 | galU | -2.5 | -7.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3290 | trkA | -2.4 | -3.2 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3052 | rfaE | -2.3 | -9.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3621 | rfaC | -2.1 | -9.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2699 | recA | -2.1 | -2.8 | recombinase A (NCBI) | compare |
| b2620 | smpB | -2.1 | -2.3 | SsrA-binding protein (NCBI) | compare |
| b4593 | ymgI | -2.1 | -1.4 | hypothetical protein (RefSeq) | compare |
| b0222 | lpcA | -2.1 | -3.2 | phosphoheptose isomerase (NCBI) | compare |
| b3792 | wzxE | -2.1 | -10.5 | O-antigen translocase (NCBI) | compare |
| b0738 | tolR | -2.0 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3619 | rfaD | -2.0 | -7.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2820 | recB | -1.9 | -2.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1192 | ldcA | -1.9 | -5.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b0114 | aceE | -1.8 | -2.8 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2297 | pta | -1.8 | -1.7 | phosphate acetyltransferase (NCBI) | compare |
| b3838 | tatB | -1.8 | -5.9 | sec-independent translocase (NCBI) | compare |
| b1292 | sapC | -1.7 | -2.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4375 | prfC | -1.7 | -5.9 | peptide chain release factor 3 (NCBI) | compare |
| b3386 | rpe | -1.7 | -1.1 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3811 | xerC | -1.6 | -2.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0890 | ftsK | -1.6 | -6.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1951 | rcsA | -1.6 | -1.9 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1860 | ruvB | -1.6 | -1.8 | Holliday junction DNA helicase B (NCBI) | compare |
| b4172 | hfq | -1.6 | -1.5 | RNA-binding protein Hfq (NCBI) | compare |
| b3631 | rfaG | -1.6 | -12.7 | glucosyltransferase I (NCBI) | compare |
| b0739 | tolA | -1.6 | -4.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4239 | treC | -1.6 | -3.1 | trehalose-6-P hydrolase (NCBI) | compare |
| b2894 | xerD | -1.6 | -1.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0741 | pal | -1.5 | -5.3 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3341 | rpsG | -1.5 | -1.9 | 30S ribosomal protein S7 (NCBI) | compare |
| b2912 | ygfA | -1.5 | -4.6 | putative ligase (VIMSS) | compare |
| b1506 | yneL | -1.5 | -2.5 | predicted transcriptional regulator (NCBI) | compare |
| b4042 | dgkA | -1.4 | -2.9 | diacylglycerol kinase (NCBI) | compare |
| b3620 | rfaF | -1.4 | -6.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3163 | nlpI | -1.4 | -4.1 | hypothetical protein (NCBI) | compare |
| b2501 | ppk | -1.4 | -7.3 | polyphosphate kinase (NCBI) | compare |
| b1677 | lpp | -1.3 | -2.2 | murein lipoprotein (NCBI) | compare |
| b0726 | sucA | -1.3 | -5.0 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b4202 | rpsR | -1.3 | -2.1 | 30S ribosomal protein S18 (NCBI) | compare |
| b4676 | yoaK | -1.3 | -0.7 | expressed protein (RefSeq) | compare |
| b1551 | b1551 | -1.3 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3162 | deaD | -1.3 | -4.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0740 | tolB | -1.3 | -4.9 | translocation protein TolB precursor (NCBI) | compare |
| b2288 | nuoA | -1.2 | -3.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0049 | apaH | -1.2 | -3.6 | diadenosinetetraphosphatase (NCBI) | compare |
| b0407 | yajC | -1.2 | -2.6 | preprotein translocase subunit YajC (NCBI) | compare |
| b3725 | pstB | -1.2 | -1.2 | phosphate transporter subunit (NCBI) | compare |
| b1863 | ruvC | -1.2 | -2.3 | Holliday junction resolvase (NCBI) | compare |
| b0053 | surA | -1.2 | -5.8 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1351 | racC | -1.2 | -0.8 | Rac prophage; predicted protein (NCBI) | compare |
| b1291 | sapD | -1.1 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0912 | ihfB | -1.1 | -4.1 | integration host factor subunit beta (NCBI) | compare |
| b3027 | ygiZ | -1.1 | -0.7 | conserved inner membrane protein (NCBI) | compare |
| b3977 | tyrU | -1.0 | -1.2 | tRNA-Tyr (NCBI) | compare |
| b2846 | yqeH | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b3390 | aroK | -1.0 | -1.8 | shikimate kinase I (NCBI) | compare |
| b0688 | pgm | -1.0 | -4.4 | phosphoglucomutase (NCBI) | compare |
| b2276 | nuoN | -1.0 | -4.9 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1129 | phoQ | -1.0 | -1.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b4520 | ymgF | -1.0 | -1.7 | hypothetical protein (NCBI) | compare |
| b3933 | ftsN | -1.0 | -6.0 | essential cell division protein (NCBI) | compare |
| b2808 | gcvA | -1.0 | -3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3261 | fis | -1.0 | -2.7 | DNA-binding protein Fis (NCBI) | compare |
| b1429 | tehA | -1.0 | -1.7 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4155 | yjeA | -1.0 | -0.7 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3806 | cyaA | -1.0 | -5.3 | adenylate cyclase (NCBI) | compare |
| b2285 | nuoE | -1.0 | -2.3 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3836 | b3836 | -1.0 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1502 | ydeQ | -1.0 | -2.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3183 | obgE | -1.0 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3204 | ptsN | -1.0 | -4.0 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1182 | hlyE | -1.0 | -0.6 | hemolysin E (VIMSS) | compare |
| b0677 | nagA | -0.9 | -5.1 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1505 | ydeT | -0.9 | -1.2 | hypothetical protein (RefSeq) | compare |
| b3229 | sspA | -0.9 | -3.1 | stringent starvation protein A (NCBI) | compare |
| b2329 | aroC | -0.9 | -4.5 | chorismate synthase (NCBI) | compare |
| b1984 | asnW | -0.9 | -1.4 | tRNA-Asn (NCBI) | compare |
| b0737 | tolQ | -0.9 | -2.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1572 | ydfB | -0.9 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1576 | ydfD | -0.9 | -0.6 | Qin prophage; predicted protein (NCBI) | compare |
| b0386 | proC | -0.9 | -5.3 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0439 | lon | -0.9 | -4.1 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0200 | gmhB | -0.9 | -1.8 | hypothetical protein (NCBI) | compare |
| b3226 | yhcK | -0.9 | -4.6 | putative FADA-type transcriptional regulator (VIMSS) | compare |
| b2286 | nuoC | -0.9 | -4.5 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3790 | rffC | -0.9 | -4.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3870 | glnA | -0.9 | -2.9 | glutamine synthetase (NCBI) | compare |
| b1058 | yceO | -0.9 | -0.4 | hypothetical protein (NCBI) | compare |
| b1712 | ihfA | -0.9 | -2.0 | integration host factor subunit alpha (NCBI) | compare |
| b3405 | ompR | -0.9 | -3.7 | osmolarity response regulator (NCBI) | compare |
| b0303 | ykgI | -0.9 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1785 | yeaI | -0.9 | -2.9 | predicted diguanylate cyclase (NCBI) | compare |
| b1961 | dcm | -0.9 | -1.6 | DNA cytosine methylase (NCBI) | compare |
| b0721 | sdhC | -0.9 | -4.9 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b4435 | isrC | -0.8 | -1.7 | unknown RNA (NCBI) | compare |
| b1304 | pspA | -0.8 | -3.3 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3630 | rfaP | -0.8 | -6.6 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2017 | yefM | -0.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3463 | ftsE | -0.8 | -1.1 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1179 | ycgL | -0.8 | -2.3 | conserved protein (NCBI) | compare |
| b3609 | secB | -0.8 | -2.3 | export protein SecB (NCBI) | compare |
| b1293 | sapB | -0.8 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2363 | yfdT | -0.8 | -2.3 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b0902 | pflA | -0.8 | -5.7 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0658 | ybeX | -0.8 | -0.9 | predicteed ion transport (NCBI) | compare |
| b2279 | nuoK | -0.8 | -2.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3414 | gntY | -0.8 | -3.7 | predicted gluconate transport associated protein (NCBI) | compare |
| b0730 | mngR | -0.8 | -1.5 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1257 | yciE | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b1273 | yciN | -0.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b2424 | cysU | -0.8 | -2.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b2352 | yfdI | -0.8 | -0.5 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b4481 | rffT | -0.8 | -4.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1363 | trkG | -0.8 | -0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4139 | aspA | -0.8 | -5.4 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2168 | fruK | -0.8 | -1.3 | 1-phosphofructokinase (NCBI) | compare |
| b2282 | nuoH | -0.8 | -3.1 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2287 | nuoB | -0.8 | -3.5 | NADH dehydrogenase subunit B (NCBI) | compare |
| b3791 | rffA | -0.8 | -4.5 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4177 | purA | -0.7 | -1.3 | adenylosuccinate synthetase (NCBI) | compare |
| b3623 | rfaK | -0.7 | -1.8 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1028 | ymdE | -0.7 | -3.7 | orf, hypothetical protein (VIMSS) | compare |
| b2277 | nuoM | -0.7 | -4.7 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3210 | arcB | -0.7 | -4.2 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2512 | yfgL | -0.7 | -3.9 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3916 | pfkA | -0.7 | -2.5 | 6-phosphofructokinase (NCBI) | compare |
| b4557 | yidD | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b3169 | nusA | -0.7 | -2.6 | transcription elongation factor NusA (NCBI) | compare |
| b4407 | thiS | -0.7 | -1.6 | sulfur carrier protein ThiS (NCBI) | compare |
| b2284 | nuoF | -0.7 | -3.3 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0903 | pflB | -0.7 | -5.6 | pyruvate formate lyase I (NCBI) | compare |
| b0908 | aroA | -0.7 | -4.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3858 | yihD | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b2278 | nuoL | -0.7 | -5.0 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3624 | rfaZ | -0.7 | -1.7 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4025 | pgi | -0.7 | -5.0 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3164 | pnp | -0.7 | -2.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2281 | nuoI | -0.7 | -2.5 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2935 | tktA | -0.7 | -1.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2498 | upp | -0.7 | -1.5 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1482 | osmC | -0.7 | -1.3 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b2055 | wcaE | -0.7 | -0.4 | predicted glycosyl transferase (NCBI) | compare |
| b2569 | lepA | -0.7 | -2.8 | GTP-binding protein LepA (NCBI) | compare |
| b1579 | intQ | -0.7 | -2.8 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b0310 | ykgH | -0.7 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b2141 | yohJ | -0.7 | -2.4 | hypothetical protein (NCBI) | compare |
| b2280 | nuoJ | -0.7 | -3.8 | NADH dehydrogenase subunit J (NCBI) | compare |
| b0471 | ybaB | -0.7 | -2.6 | hypothetical protein (NCBI) | compare |
| b1499 | ydeO | -0.7 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1850 | eda | -0.7 | -1.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2937 | speB | -0.7 | -3.4 | agmatinase (NCBI) | compare |
| b0720 | gltA | -0.7 | -4.0 | citrate synthase (NCBI) | compare |
| b2830 | nudH | -0.7 | -1.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3626 | rfaJ | -0.7 | -3.4 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b1693 | aroD | -0.7 | -3.2 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3842 | rfaH | -0.7 | -3.9 | transcriptional activator RfaH (NCBI) | compare |
| b4175 | hflC | -0.6 | -5.2 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b1332 | ynaJ | -0.6 | -0.5 | predicted inner membrane protein (NCBI) | compare |
| b0279 | yagM | -0.6 | -0.4 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2110 | yehC | -0.6 | -1.0 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b0928 | aspC | -0.6 | -3.2 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b3979 | thrT | -0.6 | -0.4 | tRNA-Thr (NCBI) | compare |
| b3075 | ebgR | -0.6 | -3.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3094 | exuR | -0.6 | -3.1 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b4640 | yoeG | -0.6 | -2.1 | no description | compare |
| b3462 | ftsX | -0.6 | -3.3 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3794 | rffM | -0.6 | -4.0 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1545 | pinQ | -0.6 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1877 | yecT | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3728 | pstS | -0.6 | -2.4 | phosphate transporter subunit (NCBI) | compare |
| b4171 | miaA | -0.6 | -2.4 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1831 | proQ | -0.6 | -1.4 | putative solute/DNA competence effector (NCBI) | compare |
| b0080 | fruR | -0.6 | -3.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2283 | nuoG | -0.6 | -4.1 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b1048 | mdoG | -0.6 | -3.2 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0705 | ybfL | -0.6 | -0.4 | putative receptor protein (VIMSS) | compare |
| b3625 | rfaY | -0.6 | -2.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3198 | kdsC | -0.6 | -2.7 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b1176 | minC | -0.6 | -1.2 | septum formation inhibitor (NCBI) | compare |
| b1347 | ydaC | -0.6 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b4494 | arpB | -0.6 | -1.5 | no description | compare |
| b0364 | yaiS | -0.6 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b4458 | oxyS | -0.6 | -1.1 | global regulatory RNA (NCBI) | compare |
| b2951 | yggS | -0.6 | -2.7 | predicted enzyme (NCBI) | compare |
| b3849 | trkH | -0.6 | -4.5 | potassium transporter (NCBI) | compare |
| b3292 | zntR | -0.6 | -2.3 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b2504 | yfgG | -0.6 | -0.8 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b1258 | yciF | -0.6 | -0.7 | hypothetical protein (NCBI) | compare |
| b4508 | peaD | -0.6 | -2.1 | putative sensory transduction regulator (VIMSS) | compare |
| b4373 | rimI | -0.6 | -2.5 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b3816 | corA | -0.6 | -4.1 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b1222 | narX | -0.6 | -2.9 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |