| | gene | name | fitness | t score | description | |
|---|
| b3979 | thrT | -3.2 | -1.3 | tRNA-Thr (NCBI) | compare |
| b0438 | clpX | -2.9 | -11.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0630 | lipB | -2.2 | -3.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1860 | ruvB | -2.2 | -2.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b4202 | rpsR | -2.2 | -3.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b1236 | galU | -2.1 | -7.6 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0437 | clpP | -2.1 | -7.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3811 | xerC | -2.1 | -4.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b0890 | ftsK | -2.1 | -7.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0683 | fur | -2.0 | -2.7 | ferric uptake regulator (NCBI) | compare |
| b3839 | tatC | -2.0 | -9.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1192 | ldcA | -1.9 | -5.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b3183 | obgE | -1.9 | -2.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3631 | rfaG | -1.8 | -14.8 | glucosyltransferase I (NCBI) | compare |
| b3021 | ygiT | -1.8 | -4.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4172 | hfq | -1.7 | -1.6 | RNA-binding protein Hfq (NCBI) | compare |
| b3169 | nusA | -1.7 | -4.2 | transcription elongation factor NusA (NCBI) | compare |
| b1850 | eda | -1.7 | -3.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2168 | fruK | -1.7 | -1.4 | 1-phosphofructokinase (NCBI) | compare |
| b2620 | smpB | -1.7 | -2.5 | SsrA-binding protein (NCBI) | compare |
| b2820 | recB | -1.7 | -2.9 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3405 | ompR | -1.6 | -5.8 | osmolarity response regulator (NCBI) | compare |
| b1920 | fliY | -1.6 | -4.1 | cystine transporter subunit (NCBI) | compare |
| b0049 | apaH | -1.6 | -4.4 | diadenosinetetraphosphatase (NCBI) | compare |
| b2330 | yfcB | -1.6 | -2.3 | putative adenine-specific methylase (VIMSS) | compare |
| b3290 | trkA | -1.6 | -3.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3613 | yibP | -1.5 | -5.2 | putative membrane protein (VIMSS) | compare |
| b2699 | recA | -1.5 | -2.6 | recombinase A (NCBI) | compare |
| b0739 | tolA | -1.5 | -4.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1290 | sapF | -1.5 | -3.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3621 | rfaC | -1.5 | -7.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3619 | rfaD | -1.4 | -5.8 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4593 | ymgI | -1.4 | -1.3 | hypothetical protein (RefSeq) | compare |
| b2567 | rnc | -1.4 | -1.7 | ribonuclease III (NCBI) | compare |
| b2894 | xerD | -1.4 | -1.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1729 | ydjN | -1.4 | -5.2 | predicted transporter (NCBI) | compare |
| b0222 | lpcA | -1.3 | -3.8 | phosphoheptose isomerase (NCBI) | compare |
| b3725 | pstB | -1.3 | -1.3 | phosphate transporter subunit (NCBI) | compare |
| b1984 | asnW | -1.3 | -2.0 | tRNA-Asn (NCBI) | compare |
| b1551 | b1551 | -1.3 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2297 | pta | -1.3 | -1.7 | phosphate acetyltransferase (NCBI) | compare |
| b1332 | ynaJ | -1.3 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b4375 | prfC | -1.3 | -5.2 | peptide chain release factor 3 (NCBI) | compare |
| b4503 | yafF | -1.3 | -1.2 | no description | compare |
| b4239 | treC | -1.2 | -2.9 | trehalose-6-P hydrolase (NCBI) | compare |
| b4042 | dgkA | -1.2 | -3.3 | diacylglycerol kinase (NCBI) | compare |
| b3838 | tatB | -1.2 | -5.7 | sec-independent translocase (NCBI) | compare |
| b3609 | secB | -1.2 | -2.9 | export protein SecB (NCBI) | compare |
| b3792 | wzxE | -1.2 | -6.0 | O-antigen translocase (NCBI) | compare |
| b3052 | rfaE | -1.2 | -5.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1252 | tonB | -1.2 | -3.8 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1917 | yecC | -1.2 | -4.8 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1357 | ydaS | -1.1 | -3.1 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1712 | ihfA | -1.1 | -2.5 | integration host factor subunit alpha (NCBI) | compare |
| b1575 | dicB | -1.1 | -2.6 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1642 | slyA | -1.1 | -1.4 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b3620 | rfaF | -1.1 | -4.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2846 | yqeH | -1.1 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3027 | ygiZ | -1.1 | -0.7 | conserved inner membrane protein (NCBI) | compare |
| b2935 | tktA | -1.1 | -2.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1830 | prc | -1.1 | -6.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3390 | aroK | -1.1 | -1.6 | shikimate kinase I (NCBI) | compare |
| b4155 | yjeA | -1.1 | -0.7 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b1129 | phoQ | -1.0 | -1.9 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1506 | yneL | -1.0 | -1.6 | predicted transcriptional regulator (NCBI) | compare |
| b1130 | phoP | -1.0 | -1.9 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b4414 | tff | -1.0 | -3.4 | unknown RNA (NCBI) | compare |
| b4676 | yoaK | -1.0 | -0.8 | expressed protein (RefSeq) | compare |
| b1918 | yecS | -1.0 | -4.9 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0903 | pflB | -1.0 | -8.1 | pyruvate formate lyase I (NCBI) | compare |
| b3933 | ftsN | -1.0 | -6.0 | essential cell division protein (NCBI) | compare |
| b3463 | ftsE | -1.0 | -1.1 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0080 | fruR | -1.0 | -6.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2904 | gcvH | -1.0 | -3.2 | glycine cleavage system protein H (NCBI) | compare |
| b0990 | cspG | -1.0 | -0.9 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2912 | ygfA | -1.0 | -3.3 | putative ligase (VIMSS) | compare |
| b3806 | cyaA | -1.0 | -5.1 | adenylate cyclase (NCBI) | compare |
| b3630 | rfaP | -0.9 | -7.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1773 | ydjI | -0.9 | -2.0 | predicted aldolase (NCBI) | compare |
| b2501 | ppk | -0.9 | -6.6 | polyphosphate kinase (NCBI) | compare |
| b4025 | pgi | -0.9 | -6.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b0730 | mngR | -0.9 | -1.7 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1493 | gadB | -0.9 | -1.1 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b3863 | polA | -0.9 | -1.5 | DNA polymerase I (NCBI) | compare |
| b2822 | recC | -0.9 | -4.0 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1058 | yceO | -0.9 | -0.4 | hypothetical protein (NCBI) | compare |
| b3791 | rffA | -0.9 | -6.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4497 | yeeL | -0.9 | -1.0 | no description | compare |
| b2939 | yqgB | -0.9 | -1.7 | predicted protein (RefSeq) | compare |
| b2784 | relA | -0.9 | -5.7 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b1936 | intG | -0.9 | -1.3 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1576 | ydfD | -0.9 | -0.6 | Qin prophage; predicted protein (NCBI) | compare |
| b0200 | gmhB | -0.9 | -2.0 | hypothetical protein (NCBI) | compare |
| b3836 | b3836 | -0.9 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b0738 | tolR | -0.9 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0740 | tolB | -0.9 | -4.6 | translocation protein TolB precursor (NCBI) | compare |
| b3741 | gidA | -0.9 | -4.6 | glucose-inhibited division protein A (NCBI) | compare |
| b1505 | ydeT | -0.9 | -1.2 | hypothetical protein (RefSeq) | compare |
| b3237 | argR | -0.9 | -3.4 | arginine repressor (NCBI) | compare |
| b1502 | ydeQ | -0.9 | -2.2 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b2652 | ileY | -0.9 | -0.6 | tRNA-Ile (NCBI) | compare |
| b3414 | gntY | -0.9 | -4.1 | predicted gluconate transport associated protein (NCBI) | compare |
| b3386 | rpe | -0.9 | -1.3 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2318 | truA | -0.9 | -2.6 | tRNA pseudouridine synthase A (NCBI) | compare |
| b4177 | purA | -0.9 | -1.5 | adenylosuccinate synthetase (NCBI) | compare |
| b1863 | ruvC | -0.9 | -2.4 | Holliday junction resolvase (NCBI) | compare |
| b4685 | yrbN | -0.8 | -2.2 | expressed protein (RefSeq) | compare |
| b1160 | elbA | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b0623 | cspE | -0.8 | -2.5 | cold shock protein E (NCBI) | compare |
| b0902 | pflA | -0.8 | -4.2 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0658 | ybeX | -0.8 | -0.9 | predicteed ion transport (NCBI) | compare |
| b3790 | rffC | -0.8 | -4.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1334 | fnr | -0.8 | -2.3 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2808 | gcvA | -0.8 | -3.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1677 | lpp | -0.8 | -1.7 | murein lipoprotein (NCBI) | compare |
| b4171 | miaA | -0.8 | -2.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2528 | iscA | -0.8 | -2.1 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1409 | ynbB | -0.8 | -0.8 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b3842 | rfaH | -0.8 | -4.8 | transcriptional activator RfaH (NCBI) | compare |
| b1257 | yciE | -0.8 | -0.5 | hypothetical protein (NCBI) | compare |
| b3341 | rpsG | -0.8 | -1.0 | 30S ribosomal protein S7 (NCBI) | compare |
| b1696 | ydiP | -0.8 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4640 | yoeG | -0.8 | -2.6 | no description | compare |
| b2175 | spr | -0.7 | -2.2 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1628 | rsxB | -0.7 | -2.0 | electron transport complex protein RnfB (NCBI) | compare |
| b4191 | ulaR | -0.7 | -2.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0737 | tolQ | -0.7 | -2.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1497 | b1497 | -0.7 | -0.4 | putative enzyme (VIMSS) | compare |
| b3162 | deaD | -0.7 | -3.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3816 | corA | -0.7 | -5.0 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b3870 | glnA | -0.7 | -2.6 | glutamine synthetase (NCBI) | compare |
| b0676 | nagC | -0.7 | -4.4 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b0114 | aceE | -0.7 | -1.7 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b1690 | ydiM | -0.7 | -2.2 | predicted transporter (NCBI) | compare |
| b1426 | ydcH | -0.7 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3636 | rpmG | -0.7 | -1.5 | 50S ribosomal protein L33 (NCBI) | compare |
| b0782 | moaB | -0.7 | -2.2 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b2055 | wcaE | -0.7 | -0.4 | predicted glycosyl transferase (NCBI) | compare |
| b1533 | ydeD | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2518 | ndk | -0.7 | -1.6 | nucleoside diphosphate kinase (NCBI) | compare |
| b1182 | hlyE | -0.7 | -0.6 | hemolysin E (VIMSS) | compare |
| b4481 | rffT | -0.7 | -3.8 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3164 | pnp | -0.7 | -2.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0303 | ykgI | -0.7 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3075 | ebgR | -0.7 | -3.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3005 | exbD | -0.7 | -4.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3916 | pfkA | -0.7 | -2.6 | 6-phosphofructokinase (NCBI) | compare |
| b2376 | ypdI | -0.7 | -2.9 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b1691 | ydiN | -0.7 | -2.9 | predicted transporter (RefSeq) | compare |
| b1594 | dgsA | -0.7 | -2.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3624 | rfaZ | -0.7 | -1.8 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4522 | yciX_1 | -0.6 | -2.7 | hypothetical protein (NCBI) | compare |
| b0741 | pal | -0.6 | -3.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1187 | fadR | -0.6 | -3.3 | fatty acid metabolism regulator (NCBI) | compare |
| b2897 | ygfY | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b3875 | ompL | -0.6 | -2.1 | predicted outer membrane porin L (NCBI) | compare |
| b1291 | sapD | -0.6 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3387 | dam | -0.6 | -5.0 | DNA adenine methylase (NCBI) | compare |
| b3807 | cyaY | -0.6 | -3.6 | frataxin-like protein (NCBI) | compare |
| b0279 | yagM | -0.6 | -0.4 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b3026 | qseC | -0.6 | -2.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4541 | yehK | -0.6 | -3.1 | hypothetical protein (NCBI) | compare |
| b0310 | ykgH | -0.6 | -1.0 | predicted inner membrane protein (NCBI) | compare |
| b1499 | ydeO | -0.6 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b0141 | yadN | -0.6 | -4.2 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3728 | pstS | -0.6 | -2.6 | phosphate transporter subunit (NCBI) | compare |
| b4203 | rplI | -0.6 | -3.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b4590 | ybfK | -0.6 | -0.7 | hypothetical protein (RefSeq) | compare |
| b0912 | ihfB | -0.6 | -2.1 | integration host factor subunit beta (NCBI) | compare |
| b0178 | hlpA | -0.6 | -2.5 | periplasmic chaperone (NCBI) | compare |
| b2579 | yfiD | -0.6 | -2.1 | pyruvate formate lyase subunit (NCBI) | compare |
| b1730 | ydjO | -0.6 | -0.9 | predicted protein (RefSeq) | compare |
| b0053 | surA | -0.6 | -3.3 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2313 | cvpA | -0.6 | -3.7 | membrane protein required for colicin V production (NCBI) | compare |
| b1363 | trkG | -0.6 | -0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1292 | sapC | -0.6 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3131 | agaR | -0.6 | -2.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3443 | yrhA | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3616 | tdh | -0.6 | -3.8 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1855 | lpxM | -0.6 | -3.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1600 | mdtJ | -0.6 | -1.4 | multidrug efflux system transporter (NCBI) | compare |
| b1579 | intQ | -0.6 | -2.4 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b1545 | pinQ | -0.6 | -0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b3205 | yhbJ | -0.6 | -2.6 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | -0.6 | -4.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1048 | mdoG | -0.6 | -3.4 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0677 | nagA | -0.6 | -3.4 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0300 | ykgA | -0.6 | -2.5 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b4431 | rprA | -0.6 | -1.8 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b2258 | b2258 | -0.6 | -1.0 | putative transport/receptor protein (VIMSS) | compare |
| b3462 | ftsX | -0.6 | -3.3 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3601 | mtlR | -0.6 | -3.1 | DNA-binding repressor (NCBI) | compare |
| b4441 | glmY | -0.6 | -1.5 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b0059 | hepA | -0.6 | -4.9 | ATP-dependent helicase HepA (NCBI) | compare |
| b1164 | ycgZ | -0.6 | -1.4 | hypothetical protein (NCBI) | compare |
| b0436 | tig | -0.6 | -3.7 | trigger factor (NCBI) | compare |
| b1968 | yedV | -0.6 | -2.2 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | compare |
| b3726 | pstA | -0.6 | -2.7 | phosphate transporter subunit (NCBI) | compare |
| b3727 | pstC | -0.6 | -3.4 | phosphate transporter subunit (NCBI) | compare |
| b4201 | priB | -0.6 | -2.0 | primosomal replication protein N (NCBI) | compare |