| | gene | name | fitness | t score | description | |
|---|
| b3977 | tyrU | -4.5 | -1.3 | tRNA-Tyr (NCBI) | compare |
| b1882 | cheY | -3.3 | -0.9 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0222 | lpcA | -3.2 | -4.3 | phosphoheptose isomerase (NCBI) | compare |
| b3621 | rfaC | -2.9 | -9.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3619 | rfaD | -2.7 | -6.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1236 | galU | -2.6 | -5.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0739 | tolA | -2.5 | -5.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0049 | apaH | -2.5 | -5.2 | diadenosinetetraphosphatase (NCBI) | compare |
| b0741 | pal | -2.4 | -5.8 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0232 | yafN | -2.4 | -0.9 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0564 | appY | -2.4 | -0.8 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b2620 | smpB | -2.4 | -1.8 | SsrA-binding protein (NCBI) | compare |
| b2935 | tktA | -2.3 | -2.7 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0737 | tolQ | -2.3 | -4.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4146 | yjeK | -2.2 | -2.6 | predicted lysine aminomutase (NCBI) | compare |
| b3816 | corA | -2.2 | -9.3 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0688 | pgm | -2.2 | -4.8 | phosphoglucomutase (NCBI) | compare |
| b3811 | xerC | -2.2 | -2.1 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2318 | truA | -2.1 | -3.8 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1712 | ihfA | -2.1 | -1.3 | integration host factor subunit alpha (NCBI) | compare |
| b3261 | fis | -2.1 | -2.4 | DNA-binding protein Fis (NCBI) | compare |
| b0738 | tolR | -2.0 | -3.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1860 | ruvB | -2.0 | -1.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b3613 | yibP | -1.9 | -6.0 | putative membrane protein (VIMSS) | compare |
| b1861 | ruvA | -1.9 | -2.1 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0200 | gmhB | -1.9 | -2.2 | hypothetical protein (NCBI) | compare |
| b0740 | tolB | -1.9 | -5.9 | translocation protein TolB precursor (NCBI) | compare |
| b4407 | thiS | -1.8 | -2.7 | sulfur carrier protein ThiS (NCBI) | compare |
| b1346 | ydaQ | -1.8 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4042 | dgkA | -1.8 | -2.4 | diacylglycerol kinase (NCBI) | compare |
| b1506 | yneL | -1.8 | -1.7 | predicted transcriptional regulator (NCBI) | compare |
| b3052 | rfaE | -1.8 | -5.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3290 | trkA | -1.7 | -2.8 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2820 | recB | -1.7 | -2.3 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0726 | sucA | -1.7 | -5.3 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1730 | ydjO | -1.7 | -1.3 | predicted protein (RefSeq) | compare |
| b4375 | prfC | -1.7 | -5.2 | peptide chain release factor 3 (NCBI) | compare |
| b1160 | elbA | -1.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -1.7 | -5.7 | glucose-inhibited division protein A (NCBI) | compare |
| b3341 | rpsG | -1.6 | -1.1 | 30S ribosomal protein S7 (NCBI) | compare |
| b1575 | dicB | -1.6 | -2.1 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b4410 | ecnA | -1.6 | -1.4 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b4647 | mokA | -1.6 | -0.9 | no description | compare |
| b1984 | asnW | -1.6 | -1.3 | tRNA-Asn (NCBI) | compare |
| b1426 | ydcH | -1.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0088 | murD | -1.6 | -2.4 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b4702 | mgtL | -1.5 | -2.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2501 | ppk | -1.5 | -8.4 | polyphosphate kinase (NCBI) | compare |
| b2369 | evgA | -1.5 | -3.8 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b3021 | ygiT | -1.5 | -2.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1358 | ydaT | -1.4 | -1.2 | Rac prophage; predicted protein (NCBI) | compare |
| b1258 | yciF | -1.4 | -1.0 | hypothetical protein (NCBI) | compare |
| b4202 | rpsR | -1.4 | -1.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b2567 | rnc | -1.4 | -1.0 | ribonuclease III (NCBI) | compare |
| b3631 | rfaG | -1.4 | -9.8 | glucosyltransferase I (NCBI) | compare |
| b1863 | ruvC | -1.3 | -2.3 | Holliday junction resolvase (NCBI) | compare |
| b3082 | ygjM | -1.3 | -2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4025 | pgi | -1.3 | -6.7 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1192 | ldcA | -1.3 | -3.1 | L,D-carboxypeptidase A (NCBI) | compare |
| b2288 | nuoA | -1.3 | -3.3 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1161 | ycgX | -1.3 | -0.8 | hypothetical protein (NCBI) | compare |
| b2330 | yfcB | -1.3 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b4699 | fnrS | -1.3 | -0.7 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b2830 | nudH | -1.3 | -1.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1454 | yncG | -1.3 | -2.8 | predicted enzyme (NCBI) | compare |
| b4570 | lomR | -1.3 | -1.8 | no description | compare |
| b2774 | ygcW | -1.3 | -4.2 | putative oxidoreductase (VIMSS) | compare |
| b1434 | ydcN | -1.3 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2642 | yfjW | -1.2 | -0.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4603 | rseX | -1.2 | -0.7 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b3169 | nusA | -1.2 | -2.4 | transcription elongation factor NusA (NCBI) | compare |
| b3002 | yqhA | -1.2 | -1.9 | hypothetical protein (NCBI) | compare |
| b4460 | araH | -1.2 | -3.0 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b2912 | ygfA | -1.2 | -2.5 | putative ligase (VIMSS) | compare |
| b0721 | sdhC | -1.2 | -5.1 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b4481 | rffT | -1.2 | -6.0 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1217 | chaB | -1.2 | -1.5 | cation transport regulator (NCBI) | compare |
| b3870 | glnA | -1.2 | -3.3 | glutamine synthetase (NCBI) | compare |
| b3620 | rfaF | -1.2 | -4.9 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1503 | ydeR | -1.2 | -3.5 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1269 | rluB | -1.2 | -2.5 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b2082 | ogrK | -1.2 | -1.4 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b3629 | rfaS | -1.2 | -3.6 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2272 | yfbM | -1.2 | -3.5 | hypothetical protein (NCBI) | compare |
| b1533 | ydeD | -1.1 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1070 | flgN | -1.1 | -1.2 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b2017 | yefM | -1.1 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0677 | nagA | -1.1 | -5.0 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4201 | priB | -1.1 | -2.8 | primosomal replication protein N (NCBI) | compare |
| b3162 | deaD | -1.1 | -4.2 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1150 | ymfR | -1.1 | -0.7 | e14 prophage; predicted protein (NCBI) | compare |
| b0364 | yaiS | -1.1 | -3.6 | orf, hypothetical protein (VIMSS) | compare |
| b4239 | treC | -1.1 | -0.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b2279 | nuoK | -1.1 | -1.6 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4640 | yoeG | -1.1 | -2.8 | no description | compare |
| b1231 | tyrT | -1.1 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b1830 | prc | -1.1 | -4.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b4451 | ryhB | -1.1 | -1.3 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b4452 | gadY | -1.1 | -6.9 | unknown RNA (NCBI) | compare |
| b0535 | fimZ | -1.1 | -3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4559 | yjdO | -1.1 | -3.6 | hypothetical protein (NCBI) | compare |
| b3636 | rpmG | -1.1 | -1.5 | 50S ribosomal protein L33 (NCBI) | compare |
| b3026 | qseC | -1.1 | -3.3 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1293 | sapB | -1.1 | -1.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1823 | cspC | -1.1 | -2.1 | stress protein, member of the CspA-family (NCBI) | compare |
| b1739 | osmE | -1.1 | -1.4 | DNA-binding transcriptional activator (NCBI) | compare |
| b4171 | miaA | -1.0 | -2.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3792 | wzxE | -1.0 | -5.9 | O-antigen translocase (NCBI) | compare |
| b3706 | trmE | -1.0 | -4.2 | tRNA modification GTPase (NCBI) | compare |
| b3630 | rfaP | -1.0 | -7.3 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3443 | yrhA | -1.0 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0730 | mngR | -1.0 | -1.5 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3807 | cyaY | -1.0 | -3.6 | frataxin-like protein (NCBI) | compare |
| b2699 | recA | -1.0 | -1.4 | recombinase A (NCBI) | compare |
| b1862 | yebB | -1.0 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b3842 | rfaH | -1.0 | -4.1 | transcriptional activator RfaH (NCBI) | compare |
| b3794 | rffM | -1.0 | -4.4 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b2808 | gcvA | -1.0 | -3.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2286 | nuoC | -1.0 | -4.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3257 | yhdT | -1.0 | -2.1 | conserved inner membrane protein (NCBI) | compare |
| b0890 | ftsK | -1.0 | -4.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3863 | polA | -1.0 | -1.0 | DNA polymerase I (NCBI) | compare |
| b2189 | proL | -1.0 | -1.3 | tRNA-Pro (NCBI) | compare |
| b3787 | rffD | -1.0 | -6.4 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3183 | obgE | -0.9 | -1.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4179 | vacB | -0.9 | -4.5 | putative enzyme (VIMSS) | compare |
| b3387 | dam | -0.9 | -6.8 | DNA adenine methylase (NCBI) | compare |
| b2990 | hybG | -0.9 | -2.4 | hydrogenase 2 accessory protein (NCBI) | compare |
| b4320 | fimH | -0.9 | -6.2 | minor component of type 1 fimbriae (NCBI) | compare |
| b0051 | ksgA | -0.9 | -2.9 | dimethyladenosine transferase (NCBI) | compare |
| b3979 | thrT | -0.9 | -0.4 | tRNA-Thr (NCBI) | compare |
| b3790 | rffC | -0.9 | -2.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3962 | udhA | -0.9 | -4.7 | putative oxidoreductase (VIMSS) | compare |
| b1831 | proQ | -0.9 | -2.2 | putative solute/DNA competence effector (NCBI) | compare |
| b4509 | ylcG | -0.9 | -1.8 | DLP12 prophage; predicted protein (NCBI) | compare |
| b4184 | yjfL | -0.9 | -3.2 | conserved inner membrane protein (NCBI) | compare |
| b4701 | sokX | -0.9 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1286 | rnb | -0.9 | -2.1 | exoribonuclease II (NCBI) | compare |
| b4535 | yniD | -0.9 | -1.2 | predicted protein (RefSeq) | compare |
| b3844 | fre | -0.9 | -4.6 | NAD(P)H-flavin reductase (NCBI) | compare |
| b2277 | nuoM | -0.9 | -4.3 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1921 | fliZ | -0.9 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2175 | spr | -0.9 | -2.4 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b2259 | pmrD | -0.9 | -0.8 | polymyxin resistance protein B (VIMSS) | compare |
| b4316 | fimC | -0.9 | -5.7 | periplasmic chaperone, required for type 1 fimbriae (VIMSS) | compare |
| b4317 | fimD | -0.9 | -8.0 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b4529 | ydbJ | -0.9 | -0.7 | hypothetical protein (NCBI) | compare |
| b2579 | yfiD | -0.9 | -1.3 | pyruvate formate lyase subunit (NCBI) | compare |
| b0018 | mokC | -0.9 | -0.9 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1048 | mdoG | -0.9 | -4.2 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b4232 | fbp | -0.9 | -5.7 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b2110 | yehC | -0.9 | -1.1 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b2822 | recC | -0.8 | -3.9 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2859 | ygeO | -0.8 | -1.9 | hypothetical protein (RefSeq) | compare |
| b3390 | aroK | -0.8 | -1.2 | shikimate kinase I (NCBI) | compare |
| b1290 | sapF | -0.8 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0297 | eaeH | -0.8 | -3.7 | attaching and effacing protein, pathogenesis factor (RefSeq) | compare |
| b2528 | iscA | -0.8 | -1.2 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1850 | eda | -0.8 | -1.3 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0004 | thrC | -0.8 | -4.7 | threonine synthase (NCBI) | compare |
| b1936 | intG | -0.8 | -0.8 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1348 | lar | -0.8 | -1.2 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1292 | sapC | -0.8 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4697 | yrdF | -0.8 | -2.2 | no description | compare |
| b0724 | sdhB | -0.8 | -3.3 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0630 | lipB | -0.8 | -1.2 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2276 | nuoN | -0.8 | -2.8 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b4172 | hfq | -0.8 | -0.9 | RNA-binding protein Hfq (NCBI) | compare |
| b0389 | yaiA | -0.8 | -1.5 | hypothetical protein (NCBI) | compare |
| b0722 | sdhD | -0.8 | -3.5 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0437 | clpP | -0.8 | -4.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2252 | ais | -0.8 | -3.6 | hypothetical protein (NCBI) | compare |
| b4155 | yjeA | -0.8 | -0.5 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b4312 | fimB | -0.8 | -5.6 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b3210 | arcB | -0.8 | -4.2 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b3961 | oxyR | -0.8 | -4.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3727 | pstC | -0.8 | -3.7 | phosphate transporter subunit (NCBI) | compare |
| b1675 | ydhZ | -0.8 | -3.7 | hypothetical protein (NCBI) | compare |
| b4650 | yibS | -0.8 | -1.7 | no description | compare |
| b2846 | yqeH | -0.8 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b3035 | tolC | -0.8 | -4.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1257 | yciE | -0.8 | -0.4 | hypothetical protein (NCBI) | compare |
| b3587 | yiaW | -0.8 | -4.4 | conserved inner membrane protein (NCBI) | compare |
| b0080 | fruR | -0.8 | -3.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0903 | pflB | -0.8 | -4.6 | pyruvate formate lyase I (NCBI) | compare |
| b4579 | yaiX | -0.8 | -3.3 | no description | compare |
| b4314 | fimA | -0.8 | -3.5 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b0114 | aceE | -0.8 | -1.2 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0623 | cspE | -0.8 | -1.2 | cold shock protein E (NCBI) | compare |
| b0249 | ykfF | -0.8 | -1.2 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2278 | nuoL | -0.8 | -4.9 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2993 | hybD | -0.8 | -2.3 | predicted maturation element for hydrogenase 2 (NCBI) | compare |
| b1291 | sapD | -0.8 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1692 | ydiB | -0.8 | -2.3 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b0605 | ahpC | -0.8 | -2.3 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b3649 | rpoZ | -0.7 | -1.9 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0406 | tgt | -0.7 | -3.4 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b0888 | trxB | -0.7 | -2.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b0053 | surA | -0.7 | -3.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2948 | yqgE | -0.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |