| | gene | name | fitness | t score | description | |
|---|
| b3816 | corA | -5.0 | -13.9 | magnesium/nickel/cobalt transporter (NCBI) | compare |
| b0049 | apaH | -4.0 | -4.8 | diadenosinetetraphosphatase (NCBI) | compare |
| b2620 | smpB | -3.9 | -2.1 | SsrA-binding protein (NCBI) | compare |
| b0222 | lpcA | -3.7 | -4.4 | phosphoheptose isomerase (NCBI) | compare |
| b3052 | rfaE | -3.6 | -9.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3619 | rfaD | -3.4 | -6.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3621 | rfaC | -3.4 | -8.7 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4535 | yniD | -3.1 | -1.8 | predicted protein (RefSeq) | compare |
| b2528 | iscA | -3.0 | -1.7 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4202 | rpsR | -2.9 | -2.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b3620 | rfaF | -2.8 | -8.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3613 | yibP | -2.8 | -6.0 | putative membrane protein (VIMSS) | compare |
| b3443 | yrhA | -2.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1236 | galU | -2.7 | -6.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4042 | dgkA | -2.7 | -1.8 | diacylglycerol kinase (NCBI) | compare |
| b1346 | ydaQ | -2.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4520 | ymgF | -2.6 | -2.3 | hypothetical protein (NCBI) | compare |
| b2808 | gcvA | -2.5 | -5.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3863 | polA | -2.3 | -1.5 | DNA polymerase I (NCBI) | compare |
| b3916 | pfkA | -2.3 | -3.7 | 6-phosphofructokinase (NCBI) | compare |
| b0739 | tolA | -2.3 | -4.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2820 | recB | -2.3 | -1.5 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3290 | trkA | -2.2 | -1.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0630 | lipB | -2.1 | -1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2935 | tktA | -2.1 | -3.1 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1712 | ihfA | -2.1 | -1.2 | integration host factor subunit alpha (NCBI) | compare |
| b0200 | gmhB | -2.1 | -2.3 | hypothetical protein (NCBI) | compare |
| b1730 | ydjO | -2.0 | -1.0 | predicted protein (RefSeq) | compare |
| b1429 | tehA | -2.0 | -1.2 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3630 | rfaP | -2.0 | -11.6 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3811 | xerC | -1.9 | -2.6 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4146 | yjeK | -1.9 | -2.9 | predicted lysine aminomutase (NCBI) | compare |
| b1291 | sapD | -1.9 | -2.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3631 | rfaG | -1.8 | -12.5 | glucosyltransferase I (NCBI) | compare |
| b0890 | ftsK | -1.8 | -5.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0738 | tolR | -1.8 | -3.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4593 | ymgI | -1.8 | -1.0 | hypothetical protein (RefSeq) | compare |
| b4025 | pgi | -1.8 | -8.2 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2501 | ppk | -1.8 | -9.7 | polyphosphate kinase (NCBI) | compare |
| b3629 | rfaS | -1.7 | -4.8 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1160 | elbA | -1.7 | -1.2 | hypothetical protein (NCBI) | compare |
| b2330 | yfcB | -1.7 | -2.7 | putative adenine-specific methylase (VIMSS) | compare |
| b3842 | rfaH | -1.7 | -5.1 | transcriptional activator RfaH (NCBI) | compare |
| b2894 | xerD | -1.7 | -1.0 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1108 | ycfP | -1.7 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b4481 | rffT | -1.6 | -6.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0740 | tolB | -1.6 | -5.6 | translocation protein TolB precursor (NCBI) | compare |
| b1476 | fdnI | -1.6 | -1.2 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1677 | lpp | -1.6 | -2.2 | murein lipoprotein (NCBI) | compare |
| b0232 | yafN | -1.6 | -0.8 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3741 | gidA | -1.5 | -5.6 | glucose-inhibited division protein A (NCBI) | compare |
| b4431 | rprA | -1.5 | -2.3 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b4375 | prfC | -1.5 | -5.3 | peptide chain release factor 3 (NCBI) | compare |
| b2699 | recA | -1.5 | -1.7 | recombinase A (NCBI) | compare |
| b2376 | ypdI | -1.5 | -3.8 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b3792 | wzxE | -1.5 | -7.0 | O-antigen translocase (NCBI) | compare |
| b1196 | ycgY | -1.5 | -3.9 | hypothetical protein (NCBI) | compare |
| b4640 | yoeG | -1.5 | -3.4 | no description | compare |
| b3626 | rfaJ | -1.5 | -5.2 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b1258 | yciF | -1.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b4541 | yehK | -1.5 | -4.4 | hypothetical protein (NCBI) | compare |
| b2318 | truA | -1.4 | -3.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1739 | osmE | -1.4 | -2.8 | DNA-binding transcriptional activator (NCBI) | compare |
| b3082 | ygjM | -1.4 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3727 | pstC | -1.4 | -7.5 | phosphate transporter subunit (NCBI) | compare |
| b1575 | dicB | -1.4 | -1.4 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3870 | glnA | -1.4 | -3.5 | glutamine synthetase (NCBI) | compare |
| b0722 | sdhD | -1.3 | -4.5 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b1503 | ydeR | -1.3 | -3.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0737 | tolQ | -1.3 | -3.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4435 | isrC | -1.3 | -2.0 | unknown RNA (NCBI) | compare |
| b0677 | nagA | -1.3 | -5.3 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2279 | nuoK | -1.3 | -1.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1482 | osmC | -1.3 | -1.9 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0889 | lrp | -1.3 | -2.3 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b0806 | ybiM | -1.3 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0998 | torD | -1.3 | -1.1 | chaperone protein TorD (NCBI) | compare |
| b2071 | yegJ | -1.2 | -1.6 | hypothetical protein (NCBI) | compare |
| b3728 | pstS | -1.2 | -3.4 | phosphate transporter subunit (NCBI) | compare |
| b1025 | ycdT | -1.2 | -1.9 | predicted diguanylate cyclase (NCBI) | compare |
| b4701 | sokX | -1.2 | -0.6 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2272 | yfbM | -1.2 | -3.6 | hypothetical protein (NCBI) | compare |
| b3791 | rffA | -1.2 | -5.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1502 | ydeQ | -1.2 | -2.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1290 | sapF | -1.2 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3794 | rffM | -1.2 | -5.5 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0437 | clpP | -1.2 | -5.5 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0721 | sdhC | -1.2 | -2.8 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b1164 | ycgZ | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b3021 | ygiT | -1.1 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0688 | pgm | -1.1 | -3.5 | phosphoglucomutase (NCBI) | compare |
| b4414 | tff | -1.1 | -2.3 | unknown RNA (NCBI) | compare |
| b4184 | yjfL | -1.1 | -3.7 | conserved inner membrane protein (NCBI) | compare |
| b4653 | yicT | -1.1 | -2.2 | no description | compare |
| b4172 | hfq | -1.1 | -1.0 | RNA-binding protein Hfq (NCBI) | compare |
| b3625 | rfaY | -1.1 | -4.4 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2830 | nudH | -1.1 | -1.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1273 | yciN | -1.1 | -1.2 | hypothetical protein (NCBI) | compare |
| b1951 | rcsA | -1.1 | -1.2 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b4320 | fimH | -1.1 | -6.0 | minor component of type 1 fimbriae (NCBI) | compare |
| b1860 | ruvB | -1.1 | -1.0 | Holliday junction DNA helicase B (NCBI) | compare |
| b3786 | rffE | -1.1 | -6.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3183 | obgE | -1.1 | -1.2 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4171 | miaA | -1.1 | -2.9 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b2540 | hcaC | -1.1 | -2.7 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) | compare |
| b2017 | yefM | -1.1 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4191 | ulaR | -1.1 | -3.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1286 | rnb | -1.1 | -1.9 | exoribonuclease II (NCBI) | compare |
| b2912 | ygfA | -1.1 | -3.1 | putative ligase (VIMSS) | compare |
| b2586 | yfiM | -1.1 | -3.1 | predicted protein (RefSeq) | compare |
| b3790 | rffC | -1.1 | -4.0 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1651 | gloA | -1.0 | -2.7 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b0297 | eaeH | -1.0 | -4.3 | attaching and effacing protein, pathogenesis factor (RefSeq) | compare |
| b3706 | trmE | -1.0 | -4.2 | tRNA modification GTPase (NCBI) | compare |
| b0533 | sfmH | -1.0 | -5.6 | predicted fimbrial-like adhesin protein (RefSeq) | compare |
| b4314 | fimA | -1.0 | -4.3 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b1161 | ycgX | -1.0 | -0.8 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | -1.0 | -6.5 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1357 | ydaS | -1.0 | -1.5 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2618 | b2618 | -1.0 | -3.2 | orf, hypothetical protein (VIMSS) | compare |
| b4175 | hflC | -1.0 | -6.2 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3237 | argR | -1.0 | -3.5 | arginine repressor (NCBI) | compare |
| b2518 | ndk | -1.0 | -1.9 | nucleoside diphosphate kinase (NCBI) | compare |
| b2024 | hisA | -1.0 | -1.9 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b0407 | yajC | -1.0 | -2.4 | preprotein translocase subunit YajC (NCBI) | compare |
| b4503 | yafF | -1.0 | -0.6 | no description | compare |
| b1493 | gadB | -1.0 | -0.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1179 | ycgL | -1.0 | -2.6 | conserved protein (NCBI) | compare |
| b4239 | treC | -1.0 | -1.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b0683 | fur | -1.0 | -0.9 | ferric uptake regulator (NCBI) | compare |
| b4232 | fbp | -1.0 | -5.7 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b0438 | clpX | -1.0 | -4.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3387 | dam | -1.0 | -6.4 | DNA adenine methylase (NCBI) | compare |
| b3979 | thrT | -1.0 | -0.3 | tRNA-Thr (NCBI) | compare |
| b1344 | ydaO | -1.0 | -2.1 | predicted C32 tRNA thiolase (NCBI) | compare |
| b4452 | gadY | -1.0 | -5.5 | unknown RNA (NCBI) | compare |
| b1175 | minD | -1.0 | -3.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b0051 | ksgA | -1.0 | -3.4 | dimethyladenosine transferase (NCBI) | compare |
| b0053 | surA | -1.0 | -4.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3642 | pyrE | -1.0 | -2.5 | orotate phosphoribosyltransferase (NCBI) | compare |
| b0902 | pflA | -1.0 | -2.7 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b3933 | ftsN | -1.0 | -5.5 | essential cell division protein (NCBI) | compare |
| b2114 | metG | -0.9 | -1.5 | methionyl-tRNA synthetase (NCBI) | compare |
| b2859 | ygeO | -0.9 | -2.0 | hypothetical protein (RefSeq) | compare |
| b1533 | ydeD | -0.9 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0300 | ykgA | -0.9 | -3.1 | putative ARAC-type regulatory protein (VIMSS) | compare |
| b4317 | fimD | -0.9 | -8.5 | outer membrane usher protein, type 1 fimbrial synthesis (NCBI) | compare |
| b0406 | tgt | -0.9 | -4.1 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b3389 | aroB | -0.9 | -5.8 | 3-dehydroquinate synthase (NCBI) | compare |
| b0990 | cspG | -0.9 | -1.0 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3500 | gor | -0.9 | -1.6 | glutathione reductase (NCBI) | compare |
| b1839 | yebY | -0.9 | -2.3 | hypothetical protein (NCBI) | compare |
| b1985 | yeeO | -0.9 | -4.3 | predicted multidrug efflux system (RefSeq) | compare |
| b1159 | mcrA | -0.9 | -0.8 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b4570 | lomR | -0.9 | -1.6 | no description | compare |
| b4426 | isrA | -0.9 | -1.9 | unknown RNA (NCBI) | compare |
| b3726 | pstA | -0.9 | -3.1 | phosphate transporter subunit (NCBI) | compare |
| b3784 | rfe | -0.9 | -6.5 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0623 | cspE | -0.9 | -1.4 | cold shock protein E (NCBI) | compare |
| b4647 | mokA | -0.9 | -0.6 | no description | compare |
| b1724 | ydiZ | -0.9 | -1.6 | hypothetical protein (NCBI) | compare |
| b1579 | intQ | -0.9 | -2.7 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b1176 | minC | -0.9 | -2.1 | septum formation inhibitor (NCBI) | compare |
| b4588 | ylcH | -0.9 | -1.8 | hypothetical protein, DLP12 prophage (RefSeq) | compare |
| b1921 | fliZ | -0.9 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4458 | oxyS | -0.9 | -0.9 | global regulatory RNA (NCBI) | compare |
| b2369 | evgA | -0.9 | -2.9 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b4316 | fimC | -0.9 | -4.8 | periplasmic chaperone, required for type 1 fimbriae (VIMSS) | compare |
| b0303 | ykgI | -0.9 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b2569 | lepA | -0.9 | -2.6 | GTP-binding protein LepA (NCBI) | compare |
| b1862 | yebB | -0.9 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b2082 | ogrK | -0.9 | -1.2 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b3035 | tolC | -0.9 | -4.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3563 | yiaB | -0.9 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b1126 | potA | -0.9 | -3.7 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b0364 | yaiS | -0.9 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b0903 | pflB | -0.9 | -4.9 | pyruvate formate lyase I (NCBI) | compare |
| b3889 | yiiE | -0.8 | -1.7 | predicted transcriptional regulator (RefSeq) | compare |
| b1847 | yebF | -0.8 | -1.1 | predicted protein (RefSeq) | compare |
| b4155 | yjeA | -0.8 | -0.6 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b4460 | araH | -0.8 | -1.8 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1977 | asnT | -0.8 | -1.5 | tRNA-Asn (NCBI) | compare |
| b4139 | aspA | -0.8 | -5.4 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b1679 | sufE | -0.8 | -1.4 | cysteine desufuration protein SufE (NCBI) | compare |
| b0542 | renD | -0.8 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3162 | deaD | -0.8 | -2.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b4174 | hflK | -0.8 | -5.0 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b4545 | ypdJ | -0.8 | -1.3 | no description | compare |
| b3961 | oxyR | -0.8 | -4.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1506 | yneL | -0.8 | -1.1 | predicted transcriptional regulator (NCBI) | compare |
| b2274 | yfbO | -0.8 | -3.4 | predicted protein (RefSeq) | compare |
| b1861 | ruvA | -0.8 | -0.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b0004 | thrC | -0.8 | -5.1 | threonine synthase (NCBI) | compare |
| b1950 | fliR | -0.8 | -2.3 | flagellar biosynthesis protein R (NCBI) | compare |
| b0530 | sfmA | -0.8 | -2.1 | putative fimbrial-like protein (VIMSS) | compare |
| b1693 | aroD | -0.8 | -4.0 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2673 | nrdH | -0.8 | -2.5 | glutaredoxin-like protein (NCBI) | compare |
| b0044 | fixX | -0.8 | -2.3 | predicted 4Fe-4S ferredoxin-type protein (NCBI) | compare |
| b1225 | narH | -0.8 | -3.1 | nitrate reductase 1, beta (Fe-S) subunit (NCBI) | compare |
| b1983 | yeeN | -0.8 | -3.9 | hypothetical protein (NCBI) | compare |