Experiment set43S566 for Pseudomonas putida KT2440

Compare to:

LB_noSalt 30C

200 most important genes:

  gene name fitness t score description  
PP_0164 -3.2 -5.3 conserved protein of unknown function compare
PP_1232 -2.5 -3.8 conserved exported protein of unknown function compare
PP_1898 -2.2 -1.5 MotA/TolQ/ExbB proton channel family protein compare
PP_5095 -2.1 -1.4 pyrroline-5-carboxylate reductase compare
PP_4129 -2.0 -4.1 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_0691 -1.9 -1.3 Glutamate 5-kinase compare
PP_4944 -1.9 -3.2 Carbamoyltransferase compare
PP_0719 -1.8 -1.2 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_4902 -1.7 -1.6 Oligoribonuclease compare
PP_2976 -1.6 -2.6 putative transposase compare
PP_4943 -1.6 -2.0 putative Glycosyl transferase compare
PP_1317 -1.6 -4.0 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PP_5248 -1.5 -2.3 putative hydrolase compare
PP_4342 -1.5 -2.6 flagellar synthesis regulator, putative ATPase compare
PP_4941 -1.5 -3.7 conserved exported protein of unknown function compare
PP_4700 -1.5 -1.4 pantothenate synthetase compare
PP_4994 -1.5 -2.3 conserved protein of unknown function compare
PP_0856 -1.4 -1.0 conserved lipoprotein of unknown function compare
PP_4993 -1.4 -3.0 Glutathione synthetase compare
PP_1224 -1.4 -4.8 periplasmic subunit of the TolQRA transport system compare
PP_4120 -1.3 -3.3 NADH-quinone oxidoreductase subunit B compare
PP_0593 -1.3 -1.7 putative ribosome-binding factor compare
PP_5706 -1.3 -2.0 Sec translocation complex - SecG subunit compare
PP_4008 -1.3 -3.4 ATP-dependent serine protease compare
PP_0809 -1.3 -4.1 disulfide bond formation protein B compare
PP_2322 -1.2 -3.0 Major outer membrane lipoprotein compare
PP_0406 -1.2 -2.1 Nucleotidyltransferase family protein compare
PP_0434 -1.2 -3.0 Anhydro-N-acetylmuramic acid kinase compare
PP_3821 -1.2 -7.5 UTP-glucose-1-phosphate uridylyltransferase compare
PP_2145 -1.2 -2.0 beta-N-acetylglucosaminidase compare
PP_4942 -1.2 -1.9 conserved protein of unknown function compare
PP_0127 -1.2 -2.0 Thiol:disulfide interchange protein compare
PP_3903 -1.2 -1.7 conserved protein of unknown function compare
PP_0833 -1.2 -1.1 queuine tRNA-ribosyltransferase compare
PP_1733 -1.1 -1.8 membrane ATPase of the MinC-MinD-MinE system compare
PP_2378 -1.1 -2.3 Fe/S biogenesis protein NfuA compare
PP_2336 -1.1 -3.1 aconitate hydratase 1 compare
PP_0001 -1.1 -1.6 probable chromosome-partitioning protein compare
PP_4701 -1.1 -1.2 glucose-6-phosphate isomerase compare
PP_2331 -1.0 -4.0 conserved membrane protein of unknown function compare
PP_2088 -1.0 -2.8 RNA polymerase sigma factor SigX compare
PP_1216 -1.0 -2.5 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_4130 -1.0 -3.3 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_1319 -1.0 -3.4 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_0063 -1.0 -2.5 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_4785 -1.0 -3.1 conserved exported protein of unknown function compare
PP_4880 -1.0 -5.0 exoribonuclease R compare
PP_0339 -0.9 -1.7 Pyruvate dehydrogenase E1 component compare
PP_5328 -0.9 -0.9 putative phosphate transport system permease protein compare
PP_2402 -0.9 -1.8 putative Sensor histidine kinase compare
PP_1381 -0.9 -1.5 4-carboxymuconolactone decarboxylase compare
PP_3245 -0.9 -2.0 conserved protein of unknown function compare
PP_2718 -0.9 -2.5 arsenic resistance transcriptional regulator compare
PP_2414 -0.9 -2.0 conserved exported protein of unknown function compare
PP_4379 -0.9 -3.0 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_1999 -0.9 -2.0 membrane protein required for colicin V production compare
PP_0832 -0.9 -2.3 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
PP_1493 -0.9 -2.1 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_4066 -0.9 -2.6 methylglutaconyl-CoA hydratase compare
PP_5717 -0.9 -2.1 conserved protein of unknown function compare
PP_5329 -0.9 -1.0 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_5580 -0.9 -2.1 protein of unknown function compare
PP_2337 -0.9 -1.9 aconitate isomerase compare
PP_4961 -0.9 -1.7 putative Lipoprotein compare
PP_4004 -0.9 -2.9 DNA translocase FtsK compare
PP_1318 -0.9 -3.3 Cytochrome b compare
PP_5014 -0.9 -1.9 Phosphoribosyl-AMP cyclohydrolase compare
PP_4058 -0.9 -4.9 1,4-alpha-glucan branching enzyme compare
PP_3726 -0.8 -1.8 Enoyl-CoA hydratase/isomerase family protein compare
PP_1783 -0.8 -1.5 dTDP-glucose pyrophosphorylase compare
PP_4122 -0.8 -1.3 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_4937 -0.8 -3.4 toluene tolerance protein compare
PP_2107 -0.8 -1.7 conserved protein of unknown function compare
PP_1994 -0.8 -1.7 tRNA pseudouridine (38-40)synthase compare
PP_2144 -0.8 -2.8 Transcriptional regulator, TetR family compare
PP_4247 -0.8 -1.6 Exonuclease compare
PP_0683 -0.8 -2.4 conserved protein of unknown function compare
PP_4126 -0.8 -1.1 NADH-quinone oxidoreductase subunit I compare
PP_1237 -0.8 -1.0 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_1734 -0.8 -1.8 Probable septum site-determining protein MinC compare
PP_4726 -0.8 -1.7 Chaperone protein DnaJ compare
PP_2745 -0.8 -2.7 Universal stress protein family compare
PP_4989 -0.8 -2.6 Protein PilJ compare
PP_1269 -0.8 -1.3 Universal stress protein family compare
PP_4367 -0.8 -3.0 Flagellar assembly protein FliH compare
PP_1729 -0.8 -1.6 conserved protein of unknown function compare
PP_5483 -0.8 -1.9 conserved protein of unknown function compare
PP_1609 -0.8 -2.0 conserved protein of unknown function compare
PP_4660 -0.8 -2.6 Transcriptional regulator, LysR family compare
PP_4263 -0.8 -1.8 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein compare
PP_4475 -0.8 -3.4 succinylglutamate desuccinylase compare
PP_3637 -0.7 -1.4 putative Sulfonate ABC transporter, ATP-binding protein compare
PP_2299 -0.7 -2.1 Trigger factor compare
PP_5054 -0.7 -1.6 glutaredoxin 3 compare
PP_4988 -0.7 -3.6 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_5473 -0.7 -2.0 putative transcriptional regulator, LuxR family compare
PP_1553 -0.7 -1.9 conserved protein of unknown function compare
PP_1128 -0.7 -2.2 OmpA family protein compare
PP_1513 -0.7 -1.5 Ribosomal RNA small subunit methyltransferase J compare
PP_4556 -0.7 -2.6 conserved protein of unknown function compare
PP_4804 -0.7 -1.0 RlpA-like lipoprotein compare
PP_0694 -0.7 -2.9 conserved protein of unknown function compare
PP_0435 -0.7 -2.3 Peptidase, M23/M37 family compare
PP_5162 -0.7 -2.1 conserved exported protein of unknown function compare
PP_0292 -0.7 -2.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_2581 -0.7 -1.4 conserved protein of unknown function compare
PP_2214 -0.7 -2.7 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PP_4121 -0.7 -2.6 NADH-quinone oxidoreductase subunit C/D compare
PP_5735 -0.7 -2.7 conserved hypothetical protein compare
PP_3339 -0.7 -2.3 conserved exported protein of unknown function compare
PP_4482 -0.7 -2.1 Transcriptional regulator, AraC family compare
PP_2504 -0.7 -2.1 putative tautomerase K2 compare
PP_0393 -0.7 -1.3 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase compare
PP_5393 -0.7 -1.0 putative metal-binding chaperone compare
PP_0872 -0.7 -3.6 Peptide chain release factor 3 compare
PP_4124 -0.7 -2.4 NADH-quinone oxidoreductase subunit G compare
PP_2031 -0.7 -1.8 conserved protein of unknown function compare
PP_2379 -0.7 -2.5 putative cytochrome oxidase biogenesis protein compare
PP_2253 -0.7 -1.6 Transcriptional regulator, GntR family compare
PP_3819 -0.7 -3.4 glutathione reductase (NADPH) compare
PP_4261 -0.7 -2.4 cation-transporting P-type ATPase compare
PP_0914 -0.7 -4.2 GGDEF domain protein compare
PP_1410 -0.7 -1.3 conserved protein of unknown function compare
PP_5338 -0.7 -2.1 aspartate ammonia-lyase compare
PP_0345 -0.7 -2.5 putative Heptose kinase WapP compare
PP_3833 -0.7 -2.7 Response regulator compare
PP_3519 -0.6 -1.2 putative Lipoprotein compare
PP_t29 -0.6 -1.1 tRNA-Ala compare
PP_4684 -0.6 -3.0 conserved protein of unknown function with kinase-like domain compare
PP_3192 -0.6 -2.5 conserved protein of unknown function compare
PP_2074 -0.6 -2.3 Transcriptional regulator, LysR family compare
PP_0949 -0.6 -2.7 putative ATP-binding protein UPF0042 compare
PP_2999 -0.6 -1.3 Glyoxalase family protein compare
PP_1217 -0.6 -2.2 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_0405 -0.6 -2.8 conserved protein of unknown function compare
PP_4895 -0.6 -1.3 tRNA dimethylallyltransferase compare
PP_0111 -0.6 -3.0 Electron transport protein SCO1/SenC compare
PP_4693 -0.6 -1.7 RNA polymerase-binding transcription factor DksA compare
PP_3999 -0.6 -2.5 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase compare
PP_4364 -0.6 -2.6 putative Anti-sigma F factor antagonist compare
PP_3105 -0.6 -1.7 conserved membrane protein of unknown function compare
PP_5114 -0.6 -1.0 putative adenine methyltransferase compare
PP_1468 -0.6 -1.5 Tyrosine recombinase XerD compare
PP_0504 -0.6 -2.3 Outer membrane protein OprG compare
PP_5742 -0.6 -2.4 putative membrane protein of unknown function compare
PP_5652 -0.6 -1.6 conserved protein of unknown function, phage origin compare
PP_1906 -0.6 -2.2 ribosomal large subunit pseudouridine synthase C compare
PP_4875 -0.6 -2.2 conserved membrane protein of unknown function compare
PP_1635 -0.6 -1.8 DNA-binding response regulator compare
PP_1271 -0.6 -2.4 putative Multidrug efflux MFS transporter compare
PP_4819 -0.6 -3.1 conserved protein of unknown function compare
PP_2500 -0.6 -2.6 conserved protein of unknown function compare
PP_0119 -0.6 -2.0 putative zinc uptake regulation protein ZUR compare
PP_1909 -0.6 -2.6 putative septum formation protein compare
PP_0126 -0.6 -1.2 Cytochrome c4 compare
PP_5486 -0.6 -1.3 conserved protein of unknown function compare
PP_3064 -0.6 -1.6 Phage tail protein compare
PP_2121 -0.6 -1.4 putative Lipoprotein compare
PP_0908 -0.6 -2.6 conserved exported protein of unknown function compare
PP_4891 -0.6 -2.2 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex compare
PP_1508 -0.6 -1.8 conserved protein of unknown function compare
PP_1986 -0.6 -1.7 3-isopropylmalate dehydratase small subunit compare
PP_5240 -0.6 -1.8 Response regulator compare
PP_3757 -0.5 -1.7 Chemotaxis protein CheY compare
PP_5107 -0.5 -2.4 Monofunctional biosynthetic peptidoglycan transglycosylase compare
PP_4131 -0.5 -2.2 NADH-quinone oxidoreductase subunit N compare
PP_2695 -0.5 -1.9 Transcriptional regulator, LysR family compare
PP_0082 -0.5 -2.3 tryptophan synthase alpha chain compare
PP_4724 -0.5 -0.4 Carbamoyl-phosphate synthase small chain compare
PP_4343 -0.5 -2.5 Flagellar biosynthesis protein FlhF compare
PP_3738 -0.5 -2.1 putative Transcriptional regulator VanR compare
PP_0346 -0.5 -2.8 putative Heptose kinase WapQ compare
PP_4286 -0.5 -2.6 allantoinase compare
PP_3508 -0.5 -1.9 Protein CobW compare
PP_1198 -0.5 -1.3 transcriptional regulator, Cro/CI family (higA antitoxin like) compare
PP_2738 -0.5 -2.5 putative Transcriptional regulator compare
PP_0258 -0.5 -1.8 regulator of murein cross-linking compare
PP_5SB -0.5 -1.7 5S ribosomal RNA compare
PP_0629 -0.5 -2.2 conserved membrane protein of unknown function compare
PP_1153 -0.5 -1.9 putative lipoprotein compare
PP_4204 -0.5 -1.6 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor compare
PP_2002 -0.5 -2.0 putative enzyme compare
PP_0312 -0.5 -2.7 electron transfer flavoprotein, alpha subunit compare
PP_0753 -0.5 -2.5 putative Lipoprotein compare
PP_0967 -0.5 -3.1 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
PP_1207 -0.5 -1.8 conserved protein of unknown function compare
PP_5471 -0.5 -1.2 putative response regulator receiver protein compare
PP_5453 -0.5 -1.0 conserved protein of unknown function compare
PP_2016 -0.5 -1.9 conserved protein of unknown function compare
PP_2077 -0.5 -2.7 diaminopimelate decarboxylase compare
PP_1646 -0.5 -1.8 putative Thioredoxin compare
PP_2640 -0.5 -1.6 Acetyltransferase, GNAT family compare
PP_2900 -0.5 -0.9 conserved protein of unknown function compare
PP_4555 -0.5 -1.5 conserved protein of unknown function compare
PP_3649 -0.5 -1.5 Transcriptional regulator, GntR family compare
PP_3587 -0.5 -2.2 lipid hydroperoxide peroxidase compare
PP_0306 -0.5 -1.4 conserved protein of unknown function compare
PP_4829 -0.5 -1.3 putative precorrin-3B synthase compare
PP_4699 -0.5 -1.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_2555 -0.5 -1.7 conserved protein of unknown function compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments