Experiment set43S566 for Pseudomonas putida KT2440

Compare to:

LB_noSalt 30C

200 most detrimental genes:

  gene name fitness t score description  
PP_1656 +2.7 19.2 ATP:GTP 3'-pyrophosphotransferase compare
PP_1655 +2.0 8.3 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
PP_1650 +2.0 18.5 Sensor protein GacS compare
PP_4099 +1.9 16.9 two-componenent system BarA/UvrY - regulatory subunit compare
PP_0022 +0.9 1.5 hypothetical protein compare
PP_5430 +0.8 3.1 protein of unknown function compare
PP_3365 +0.8 1.9 Acetolactate synthase compare
PP_4171 +0.8 6.9 conserved exported protein of unknown function compare
PP_2889 +0.7 4.1 putative Transmembrane regulator PrtR compare
PP_5604 +0.7 1.9 putative subtilisin-like serine protease compare
PP_3312 +0.7 1.7 putative Heat shock protein compare
PP_t10 +0.7 1.6 tRNA-Pro compare
PP_5121 +0.7 3.0 conserved exported protein of unknown function compare
PP_0556 +0.7 1.9 Acetoin catabolism protein compare
PP_3378 +0.7 1.7 putative 2-ketogluconokinase compare
PP_5705 +0.6 1.7 protein of unknown function compare
PP_1113 +0.6 4.7 Pyridoxal-phosphate dependent enzyme family protein compare
PP_4710 +0.6 4.6 tRNA pseudouridine 55 synthase compare
PP_2720 +0.6 1.3 conserved protein of unknown function compare
PP_0254 +0.6 2.0 conserved protein of unknown function compare
PP_3328 +0.6 1.9 putative Ring-cleaving dioxygenase compare
PP_1045 +0.6 1.6 Type II secretion pathway protein XcpP compare
PP_0989 +0.6 2.4 glycine cleavage system H protein 1 compare
PP_5042 +0.6 2.8 conserved protein of unknown function compare
PP_0682 +0.5 2.3 conserved inner membrane protein of unknown function, UPF0114 family compare
PP_4217 +0.5 5.0 outer membrane ferripyoverdine receptor FpvA, TonB-dependent compare
PP_0794 +0.5 2.3 1-phosphofructokinase monomer compare
PP_2826 +0.5 2.3 Transcriptional regulator MexT compare
PP_1926 +0.5 1.5 putative phosphotyrosine-protein phosphatase compare
PP_0340 +0.5 4.5 Glutamate-ammonia-ligase adenylyltransferase compare
PP_3481 +0.5 1.5 conserved exported protein of unknown function compare
PP_1583 +0.5 2.1 putative Structural protein P5 compare
PP_5686 +0.5 2.3 protein of unknown function compare
PP_2070 +0.5 1.4 Transcriptional regulator, AraC family compare
PP_0566 +0.5 0.8 translation-related factor compare
PP_3876 +0.5 1.0 conserved protein of unknown function compare
PP_3662 +0.5 3.0 conserved protein of unknown function compare
PP_3891 +0.5 1.7 conserved protein of unknown function compare
PP_3880 +0.5 1.1 conserved exported protein of unknown function compare
PP_1055 +0.5 1.0 Type II secretion pathway protein GspN compare
PP_4705 +0.5 2.5 Glyoxalase compare
PP_2747 +0.5 1.4 conserved protein of unknown function compare
PP_5039 +0.5 1.7 conserved protein of unknown function compare
PP_5571 +0.5 1.2 conserved protein of unknown function compare
PP_2341 +0.5 1.0 6-carboxy-5,6,7,8-tetrahydropterin synthase compare
PP_2655 +0.5 1.4 conserved protein of unknown function compare
PP_4517 +0.4 0.8 conserved protein of unknown function compare
PP_0574 +0.4 3.9 DNA-binding response regulator, LuxR family compare
PP_2309 +0.4 1.0 conserved protein of unknown function compare
PP_5701 +0.4 1.2 conserved protein of unknown function compare
PP_5241 +0.4 1.5 DNA-binding response regulator, LuxR family compare
PP_2020 +0.4 3.0 putative Lipoprotein compare
PP_0152 +0.4 0.9 conserved exported protein of unknown function compare
PP_3831 +0.4 3.3 conserved protein of unknown function compare
PP_1164 +0.4 1.1 Transcriptional regulator, LysR family compare
PP_1575 +0.4 1.3 conserved protein of unknown function compare
PP_0368 +0.4 4.0 putative Acyl-CoA dehydrogenase compare
PP_3239 +0.4 1.3 putative cointegrate resolution protein T Tn4652 compare
PP_2737 +0.4 1.2 Oxidoreductase, short-chain dehydrogenase/reductase family compare
PP_2137 +0.4 1.2 beta-ketoadipyl CoA thiolase, beta component compare
PP_5052 +0.4 1.7 tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent compare
PP_2513 +0.4 1.5 4-oxalomesaconate tautomerase compare
PP_4133 +0.4 1.0 Transcriptional regulator-related protein compare
PP_2526 +0.4 1.4 conserved membrane protein of unknown function compare
PP_0191 +0.4 1.7 Transcriptional regulatory protein AlgQ compare
PP_5388 +0.4 1.9 probable exported copper efflux protein compare
PP_4738 +0.4 1.4 conserved exported protein of unknown function compare
PP_4561 +0.4 0.7 stress response protein compare
PP_1109 +0.4 3.5 Transcriptional regulator, GntR family compare
PP_1112 +0.4 3.0 conserved membrane protein of unknown function compare
PP_5495 +0.4 0.8 protein of unknown function compare
PP_0276 +0.4 0.7 Transcriptional regulator, Cro/CI family compare
PP_1692 +0.4 1.6 conserved protein of unknown function compare
PP_2196 +0.4 1.3 agmatinase compare
PP_5407 +0.4 2.6 Transposition protein, TnsD-related protein compare
PP_0874 +0.4 0.9 conserved protein of unknown function compare
PP_1124 +0.4 1.2 conserved membrane protein of unknown function compare
PP_1110 +0.4 1.8 serine acetyltransferase compare
PP_1167 +0.4 2.2 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) compare
PP_0120 +0.4 2.3 putative zinc ABC transporter compare
PP_5528 +0.4 0.8 conserved protein of unknown function compare
PP_2118 +0.4 1.3 conserved protein of unknown function compare
PP_0621 +0.4 1.7 conserved protein of unknown function compare
PP_3715 +0.4 1.1 Muconate cycloisomerase 1 compare
PP_4593 +0.4 1.0 conserved protein of unknown function compare
PP_4502 +0.4 1.8 putative enzyme compare
PP_2472 +0.4 1.7 putative transcriptional regulator, MerR family compare
PP_1709 +0.4 1.8 Fumarylacetoacetate hydrolase family protein compare
PP_3061 +0.4 1.9 conserved protein of unknown function compare
PP_5487 +0.4 1.6 conserved protein of unknown function compare
PP_5541 +0.4 1.8 conserved protein of unknown function compare
PP_4271 +0.4 0.7 conserved protein of unknown function compare
PP_4799 +0.4 0.2 putative Muramoyltetrapeptide carboxypeptidase compare
PP_2764 +0.4 1.5 FMN reductase (NADPH) compare
PP_1062 +0.4 1.3 MutT/nudix family protein compare
PP_4464 +0.4 1.8 Transcriptional regulator, LysR family compare
PP_2503 +0.4 1.5 putative 3-oxoacyl-(Acyl-carrier-protein) reductase compare
PP_4743 +0.4 1.8 conserved protein of unknown function compare
PP_0886 +0.4 1.5 conserved exported protein of unknown function compare
PP_0575 +0.4 2.0 conserved membrane protein of unknown function compare
PP_3883 +0.4 1.2 putative Phage holin compare
PP_5143 +0.4 1.0 conserved membrane protein of unknown function compare
PP_3888 +0.4 1.5 conserved protein of unknown function compare
PP_1522 +0.4 2.0 major cold shock protein compare
PP_2313 +0.4 1.0 conserved membrane protein of unknown function compare
PP_4290 +0.4 2.2 uric acid permease compare
PP_4211 +0.4 2.1 outer membrane pyoverdine efflux protein compare
PP_4013 +0.4 1.9 MutT/nudix family protein compare
PP_4100 +0.4 2.2 Transcriptional regulator, Cro/CI family compare
PP_0921 +0.4 1.2 Transcriptional regulator, ArsR family compare
PP_1748 +0.4 1.9 conserved protein of unknown function compare
PP_1876 +0.4 1.5 putative ATP/GTP-binding protein of the AAA+ family compare
PP_2794 +0.4 1.1 Oxidoreductase, short chain dehydrogenase/reductase family compare
PP_2824 +0.3 1.3 Transcriptional regulator, TetR family compare
PP_1114 +0.3 1.6 SEC-C domain protein compare
PP_0607 +0.3 1.1 putative Type IV pili biogenesis protein FimT compare
PP_0610 +0.3 1.5 conserved exported protein of unknown function compare
PP_4173 +0.3 2.6 Sensor histidine kinase/response regulator compare
PP_0881 +0.3 1.9 dipeptide ABC transporter - putative membrane subunit compare
PP_3810 +0.3 1.1 conserved protein of unknown function compare
PP_t64 +0.3 1.5 tRNA-Gly compare
PP_4109 +0.3 1.0 conserved protein of unknown function compare
PP_0087 +0.3 1.1 conserved exported protein of unknown function compare
PP_1774 +0.3 1.0 conserved exported protein of unknown function compare
PP_4633 +0.3 1.3 conserved protein of unknown function, DUF1244 family compare
PP_2946 +0.3 1.7 peptidyl-tRNA hydrolase, ribosome rescue factor compare
PP_1408 +0.3 2.5 (R)-3-hydroxydecanoyl-ACP:CoA transacylase compare
PP_2209 +0.3 1.6 2-aminoethylphosphonate--pyruvate transaminase compare
PP_3824 +0.3 1.0 conserved exported protein of unknown function compare
PP_4939 +0.3 1.9 conserved protein of unknown function compare
PP_3156 +0.3 1.8 Universal stress protein family compare
PP_2809 +0.3 1.8 conserved membrane protein of unknown function compare
PP_2000 +0.3 0.4 amidophosphoribosyl transferase compare
PP_0680 +0.3 2.7 ATP-dependent protease-like protein compare
PP_5671 +0.3 1.6 conserved protein of unknown function compare
PP_2972 +0.3 0.8 conserved protein of unknown function compare
PP_3808 +0.3 0.6 Antibiotic synthesis protein MbtH compare
PP_3522 +0.3 1.2 conserved protein of unknown function compare
PP_5514 +0.3 1.4 conserved protein of unknown function compare
PP_4228 +0.3 1.6 conserved protein of unknown function compare
PP_2220 +0.3 1.5 C4-type zinc finger protein, DksA/TraR family compare
PP_0774 +0.3 2.0 Phosphate acetyltransferase compare
PP_4808 +0.3 0.6 23S rRNA m3psi1915 methyltransferase compare
PP_2744 +0.3 1.9 Ribose-phosphate pyrophosphokinase family protein compare
PP_3926 +0.3 0.5 short-chain dehydrogenase compare
PP_1324 +0.3 1.5 putative endonuclease distantly related to archaeal Holliday junction resolvase compare
PP_5549 +0.3 1.7 conserved protein of unknown function compare
PP_5038 +0.3 1.2 conserved lipoprotein of unknown function compare
PP_5003 +0.3 2.5 poly(3-hydroxyalkanoate) polymerase 1 compare
PP_4244 +0.3 2.3 alternative sigma factor compare
PP_5263 +0.3 1.7 GGDEF domain protein compare
PP_0085 +0.3 1.6 conserved protein of unknown function compare
PP_4648 +0.3 2.2 Ribosomal RNA large subunit methyltransferase G compare
PP_1111 +0.3 1.8 putative Synthetase compare
PP_3058 +0.3 1.5 conserved protein of unknown function compare
PP_5232 +0.3 1.1 conserved protein of unknown function compare
PP_4238 +0.3 1.1 conserved protein of unknown function compare
PP_0361 +0.3 1.4 putative Competence protein ComF compare
PP_0202 +0.3 1.5 CBS domain-containing protein compare
PP_5711 +0.3 1.3 protein of unknown function compare
PP_5489 +0.3 1.2 conserved protein of unknown function compare
PP_3815 +0.3 1.7 Polyamine ABC transporter, permease protein compare
PP_2129 +0.3 1.4 conserved protein of unknown function compare
PP_2722 +0.3 1.4 conserved protein of unknown function compare
PP_0876 +0.3 2.0 Transcriptional regulator, AraC family compare
PP_1535 +0.3 1.5 putative Methyltransferase compare
PP_2390 +0.3 2.0 Transcriptional regulator, LysR family compare
PP_1083 +0.3 1.2 (2Fe-2S)-binding protein compare
PP_2054 +0.3 1.2 putative DNA-binding transcriptional regulator compare
PP_3384 +0.3 1.3 gluconate 2-dehydrogenase gamma subunit compare
PP_4608 +0.3 1.7 RNA polymerase sigma-70 factor, ECF subfamily compare
PP_2894 +0.3 1.1 conserved protein of unknown function compare
PP_4246 +0.3 2.1 Periplasmic binding protein compare
PP_2061 +0.3 1.3 conserved protein of unknown function compare
PP_1097 +0.3 0.5 Methionine--tRNA ligase compare
PP_5258 +0.3 1.7 L-piperidine-6-carboxylate dehydrogenase compare
PP_3400 +0.3 1.5 alpha-ketoglutarate- and Fe(II)-dependent dioxygenase compare
PP_5690 +0.3 1.5 conserved protein of unknown function compare
PP_1713 +0.3 0.8 Transcriptional regulator PcaQ compare
PP_2539 +0.3 1.6 Transcriptional regulator, LysR family compare
PP_1516 +0.3 1.1 RND membrane fusion protein compare
PP_5693 +0.3 1.6 conserved protein of unknown function compare
PP_1678 +0.3 1.1 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase compare
PP_1147 +0.3 1.0 conserved protein of unknown function compare
PP_4769 +0.3 1.1 conserved protein of unknown function compare
PP_1621 +0.3 1.5 Protein-L-isoaspartate O-methyltransferase compare
PP_2433 +0.3 0.9 conserved protein of unknown function compare
PP_4018 +0.3 1.0 Acetyltransferase, GNAT family compare
PP_2373 +0.3 1.0 conserved protein of unknown function compare
PP_2532 +0.3 1.4 conserved protein of unknown function compare
PP_1170 +0.3 1.6 D-glucaro-1,5-lactonase UxuL (from data) compare
PP_1239 +0.3 0.9 Metallo-beta-lactamase family protein compare
PP_0273 +0.3 1.0 conserved protein of unknown function compare
PP_5730 +0.3 1.1 conserved protein of unknown function compare
PP_2232 +0.3 1.1 XRE family transcriptional regulator compare
PP_0304 +0.3 1.6 Carnitine uptake ABC transporter, periplasmic component compare
PP_0628 +0.3 1.0 conserved protein of unknown function compare
PP_3682 +0.3 1.4 conserved protein of unknown function compare
PP_4874 +0.3 0.4 50S ribosomal protein L9 compare
PP_4779 +0.3 2.5 AMP nucleosidase compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments