Experiment set43S519 for Pseudomonas putida KT2440

Compare to:

LB_noSalt 37C

200 most important genes:

  gene name fitness t score description  
PP_0164 -3.0 -5.6 conserved protein of unknown function compare
PP_2322 -2.6 -4.7 Major outer membrane lipoprotein compare
PP_1237 -2.6 -3.0 4-hydroxy-tetrahydrodipicolinate synthase compare
PP_4008 -2.4 -3.3 ATP-dependent serine protease compare
PP_1898 -2.3 -1.6 MotA/TolQ/ExbB proton channel family protein compare
PP_4943 -2.3 -2.7 putative Glycosyl transferase compare
PP_4902 -2.2 -1.5 Oligoribonuclease compare
PP_2145 -2.1 -2.8 beta-N-acetylglucosaminidase compare
PP_4122 -2.1 -2.8 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E compare
PP_3821 -2.0 -11.3 UTP-glucose-1-phosphate uridylyltransferase compare
PP_4994 -2.0 -3.0 conserved protein of unknown function compare
PP_1224 -2.0 -7.1 periplasmic subunit of the TolQRA transport system compare
PP_1232 -2.0 -4.5 conserved exported protein of unknown function compare
PP_4726 -1.8 -3.1 Chaperone protein DnaJ compare
PP_4129 -1.7 -4.1 NADH:ubiquinone oxidoreductase, membrane subunit L compare
PP_1215 -1.7 -3.1 Crossover junction endodeoxyribonuclease RuvC compare
PP_0406 -1.7 -2.7 Nucleotidyltransferase family protein compare
PP_1764 -1.7 -2.8 Phosphoglycolate phosphatase 2 compare
PP_4989 -1.6 -4.8 Protein PilJ compare
PP_2378 -1.6 -3.1 Fe/S biogenesis protein NfuA compare
PP_0435 -1.6 -3.8 Peptidase, M23/M37 family compare
PP_4804 -1.5 -1.5 RlpA-like lipoprotein compare
PP_4700 -1.5 -1.4 pantothenate synthetase compare
PP_1428 -1.5 -4.6 Sigma factor AlgU negative regulatory protein compare
PP_2336 -1.5 -3.9 aconitate hydratase 1 compare
PP_0127 -1.5 -2.5 Thiol:disulfide interchange protein compare
PP_4880 -1.4 -6.9 exoribonuclease R compare
PP_4940 -1.4 -7.8 Putative glycosyltransferase compare
PP_0888 -1.4 -1.5 Photosynthetic apparatus regulatory protein RegA compare
PP_1733 -1.4 -2.4 membrane ATPase of the MinC-MinD-MinE system compare
PP_4058 -1.4 -7.6 1,4-alpha-glucan branching enzyme compare
PP_1493 -1.3 -4.1 chemotaxis response regulator protein-glutamate methylesterase of group 3 operon compare
PP_0856 -1.3 -1.3 conserved lipoprotein of unknown function compare
PP_0949 -1.3 -5.7 putative ATP-binding protein UPF0042 compare
PP_2337 -1.3 -2.3 aconitate isomerase compare
PP_4993 -1.3 -3.2 Glutathione synthetase compare
PP_1322 -1.2 -2.3 putative Lipoprotein compare
PP_4004 -1.2 -3.6 DNA translocase FtsK compare
PP_0691 -1.2 -1.7 Glutamate 5-kinase compare
PP_0809 -1.1 -4.1 disulfide bond formation protein B compare
PP_0434 -1.1 -2.9 Anhydro-N-acetylmuramic acid kinase compare
PP_4895 -1.1 -2.2 tRNA dimethylallyltransferase compare
PP_1528 -1.1 -1.5 conserved protein of unknown function compare
PP_3649 -1.1 -3.1 Transcriptional regulator, GntR family compare
PP_5329 -1.1 -0.8 putative phosphate ABC transporter, periplasmic phosphate-binding protein compare
PP_2320 -1.1 -7.2 conserved exported protein of unknown function compare
PP_4263 -1.1 -2.6 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein compare
PP_4268 -1.1 -1.7 nucleoid-associated broad specificity regulator compare
PP_0405 -1.1 -4.7 conserved protein of unknown function compare
PP_0846 -1.1 -1.1 DnaK-like molecular chaperone specific for IscU compare
PP_2107 -1.1 -2.0 conserved protein of unknown function compare
PP_4937 -1.1 -5.4 toluene tolerance protein compare
PP_4253 -1.1 -2.2 cytochrome c oxidase subunit, cbb3-type compare
PP_4785 -1.1 -3.2 conserved exported protein of unknown function compare
PP_4261 -1.1 -3.8 cation-transporting P-type ATPase compare
PP_4131 -1.1 -4.2 NADH-quinone oxidoreductase subunit N compare
PP_4836 -1.1 -2.4 conserved exported protein of unknown function compare
PP_0401 -1.0 -2.4 Ribosomal RNA small subunit methyltransferase A compare
PP_0855 -1.0 -1.8 conserved protein of unknown function compare
PP_4941 -1.0 -3.5 conserved exported protein of unknown function compare
PP_2214 -1.0 -3.6 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PP_0753 -1.0 -4.9 putative Lipoprotein compare
PP_0852 -1.0 -4.0 Transcriptional regulator, Cro/CI family compare
PP_5327 -1.0 -2.4 putative phosphate ABC transporter, permease subunit compare
PP_4988 -1.0 -4.8 signal transduction histidine kinase CheA/CheY-like receiver compare
PP_5267 -1.0 -2.1 putative cytochrome c5 compare
PP_3245 -1.0 -2.3 conserved protein of unknown function compare
PP_2976 -1.0 -2.5 putative transposase compare
PP_4121 -1.0 -3.5 NADH-quinone oxidoreductase subunit C/D compare
PP_1217 -0.9 -3.4 Holliday junction ATP-dependent DNA helicase RuvB compare
PP_5110 -0.9 -2.2 cytokinetic ring ABC transporter-like subunit - ATP-binding subunit compare
PP_1198 -0.9 -2.2 transcriptional regulator, Cro/CI family (higA antitoxin like) compare
PP_4320 -0.9 -4.2 cytochrome c-type biogenesis protein compare
PP_5198 -0.9 -2.8 conserved protein of unknown function compare
PP_0801 -0.9 -1.7 conserved exported protein of unknown function compare
PP_2330 -0.9 -2.4 conserved protein of unknown function compare
PP_5028 -0.9 -3.0 proline iminopeptidase compare
PP_2581 -0.9 -2.0 conserved protein of unknown function compare
PP_1734 -0.9 -2.0 Probable septum site-determining protein MinC compare
PP_5706 -0.8 -1.6 Sec translocation complex - SecG subunit compare
PP_5328 -0.8 -0.9 putative phosphate transport system permease protein compare
PP_4120 -0.8 -2.5 NADH-quinone oxidoreductase subunit B compare
PP_5441 -0.8 -2.9 protein of unknown function compare
PP_t10 -0.8 -1.6 tRNA-Pro compare
PP_4124 -0.8 -3.0 NADH-quinone oxidoreductase subunit G compare
PP_5183 -0.8 -3.9 glutamylpolyamine synthetase compare
PP_2414 -0.8 -2.2 conserved exported protein of unknown function compare
PP_0833 -0.8 -1.0 queuine tRNA-ribosyltransferase compare
PP_5095 -0.8 -0.9 pyrroline-5-carboxylate reductase compare
PP_1994 -0.8 -1.9 tRNA pseudouridine (38-40)synthase compare
PP_1319 -0.8 -3.1 Ubiquinol--cytochrome c reductase, cytochrome c1 compare
PP_2144 -0.8 -3.0 Transcriptional regulator, TetR family compare
PP_2302 -0.8 -3.8 DNA-binding, ATP-dependent protease compare
PP_5058 -0.8 -3.7 Carboxy-terminal-processing protease compare
PP_5313 -0.8 -2.2 DNA-binding protein HU-alpha compare
PP_4273 -0.8 -1.4 Transcriptional regulator, MerR family compare
PP_4684 -0.8 -3.8 conserved protein of unknown function with kinase-like domain compare
PP_4136 -0.8 -1.1 Transcriptional regulator, LuxR family compare
PP_4546 -0.8 -2.5 ATP-dependent helicase HrpA compare
PP_3770 -0.8 -2.5 conserved protein of unknown function compare
PP_4265 -0.8 -1.2 DNA-binding transcriptional dual regulator compare
PP_1804 -0.8 -5.0 Glycosyl transferase WbpL compare
PP_1780 -0.8 -6.7 putative mannosyltransferase compare
PP_3946 -0.7 -1.1 HTH-type transcriptional repressor NicR compare
PP_4471 -0.7 -2.2 Magnesium transporter compare
PP_3903 -0.7 -1.4 conserved protein of unknown function compare
PP_0111 -0.7 -3.8 Electron transport protein SCO1/SenC compare
PP_1716 -0.7 -1.9 Transcriptional regulator, Cro/CI family compare
PP_5240 -0.7 -2.5 Response regulator compare
PP_2217 -0.7 -2.3 enoyl-CoA hydratase compare
PP_4936 -0.7 -4.3 O-antigen polymerase compare
PP_1783 -0.7 -1.5 dTDP-glucose pyrophosphorylase compare
PP_4696 -0.7 -3.2 Nitrogen regulation protein NR(I) compare
PP_3819 -0.7 -3.9 glutathione reductase (NADPH) compare
PP_1779 -0.7 -3.5 Lipopolysaccharide ABC export system, ATP-binding protein compare
PP_1317 -0.7 -2.4 Ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PP_4130 -0.7 -2.7 NADH:ubiquinone oxidoreductase, membrane subunit M compare
PP_4342 -0.7 -1.7 flagellar synthesis regulator, putative ATPase compare
PP_4475 -0.7 -3.5 succinylglutamate desuccinylase compare
PP_0625 -0.7 -5.0 Chaperone protein ClpB compare
PP_4693 -0.7 -2.0 RNA polymerase-binding transcription factor DksA compare
PP_1800 -0.7 -4.7 Oxidoreductase Rmd compare
PP_5084 -0.7 -5.2 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase compare
PP_2121 -0.7 -1.6 putative Lipoprotein compare
PP_0339 -0.7 -1.6 Pyruvate dehydrogenase E1 component compare
PP_0984 -0.7 -2.5 conserved membrane protein of unknown function compare
PP_5295 -0.7 -1.9 conserved protein of unknown function compare
PP_1468 -0.7 -1.8 Tyrosine recombinase XerD compare
PP_4286 -0.7 -3.4 allantoinase compare
PP_0484 -0.6 -3.0 transporter of an unknown substrate compare
PP_1802 -0.6 -5.3 glycosyl transferase compare
PP_2331 -0.6 -2.9 conserved membrane protein of unknown function compare
PP_4722 -0.6 -2.5 Transcription elongation factor GreA compare
PP_0292 -0.6 -2.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PP_1355 -0.6 -3.2 Muropeptide permease AmpG compare
PP_4952 -0.6 -1.4 ATP-dependent RNA helicase, specific for 23S rRNA compare
PP_5109 -0.6 -2.9 membrane component of the ABC transporter FtsEX involved in cellular division compare
PP_1430 -0.6 -4.3 putative periplasmic serine endoprotease DegP-like compare
PP_4066 -0.6 -2.1 methylglutaconyl-CoA hydratase compare
PP_0195 -0.6 -1.4 conserved protein of unknown function compare
PP_4482 -0.6 -2.2 Transcriptional regulator, AraC family compare
PP_4505 -0.6 -3.2 Sensor histidine kinase compare
PP_0063 -0.6 -1.9 putative Lipid A biosynthesis lauroyl acyltransferase compare
PP_2441 -0.6 -2.2 conserved protein of unknown function compare
PP_5162 -0.6 -2.1 conserved exported protein of unknown function compare
PP_4102 -0.6 -2.3 conserved protein of unknown function compare
PP_4917 -0.6 -2.1 3',5'-cyclic-nucleotide phosphodiesterase compare
PP_1801 -0.6 -4.4 Glycosyl transferase WbpY compare
PP_0336 -0.6 -4.0 Peptide methionine sulfoxide reductase MsrA compare
PP_2299 -0.6 -2.0 Trigger factor compare
PP_3866 -0.6 -1.9 conserved protein of unknown function compare
PP_2370 -0.6 -1.4 conserved protein of unknown function compare
PP_1216 -0.6 -1.7 Holliday junction ATP-dependent DNA helicase RuvA compare
PP_1776 -0.6 -4.8 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase compare
PP_4938 -0.6 -3.8 putative Glycosyl transferase compare
PP_1799 -0.6 -4.4 GDP-mannose 4,6-dehydratase compare
PP_1979 -0.6 -2.0 putative Hydrolase compare
PP_2402 -0.6 -1.3 putative Sensor histidine kinase compare
PP_4179 -0.6 -3.8 Chaperone protein HtpG compare
PP_5000 -0.6 -1.1 peptidase component of the ATP-dependent HslVU protease compare
PP_1598 -0.6 -2.3 regulatory intramembrane protein RIP zinc protease compare
PP_4259 -0.6 -3.7 Iron-sulfur cluster-binding protein compare
PP_3508 -0.6 -2.2 Protein CobW compare
PP_1912 -0.6 -2.4 Phosphate acyltransferase compare
PP_4699 -0.6 -1.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PP_1752 -0.6 -3.0 conserved protein of unknown function compare
PP_2820 -0.6 -1.9 HTH-type transcriptional regulator nfxB compare
PP_0719 -0.6 -0.7 ribosome-associated potassium-dependent informational ATP/GTPase compare
PP_2794 -0.5 -1.5 Oxidoreductase, short chain dehydrogenase/reductase family compare
PP_2403 -0.5 -1.3 Chemotaxis protein CheY compare
PP_4098 -0.5 -1.3 UvrABC system protein C compare
PP_1906 -0.5 -1.6 ribosomal large subunit pseudouridine synthase C compare
PP_3627 -0.5 -2.2 conserved protein of unknown function compare
PP_1190 -0.5 -2.3 conserved protein of unknown function compare
PP_5168 -0.5 -1.2 sulfate/thiosulfate import ATP-binding protein compare
PP_5007 -0.5 -1.3 Polyhydroxyalkanoate granule-associated protein GA2 compare
PP_1325 -0.5 -3.7 putative lipoprotein compare
PP_4379 -0.5 -2.1 Beta-ketoacyl-acyl-carrier-protein synthase I compare
PP_5045 -0.5 -1.8 tRNA sulfurtransferase compare
PP_3105 -0.5 -1.1 conserved membrane protein of unknown function compare
PP_4067 -0.5 -3.1 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha compare
PP_2433 -0.5 -1.5 conserved protein of unknown function compare
PP_0123 -0.5 -3.4 DNA polymerase I, 5 compare
PP_2511 -0.5 -1.6 conserved protein of unknown function compare
PP_2318 -0.5 -2.3 acyl-CoA thioesterase I/protease I/lysophospholipase L1 compare
PP_4251 -0.5 -1.5 cytochrome c oxidase subunit, cbb3-type compare
PP_4478 -0.5 -3.2 N-succinylglutamate 5-semialdehyde dehydrogenase compare
PP_1986 -0.5 -1.7 3-isopropylmalate dehydratase small subunit compare
PP_4793 -0.5 -1.5 conserved protein of unknown function compare
PP_1513 -0.5 -1.6 Ribosomal RNA small subunit methyltransferase J compare
PP_0504 -0.5 -2.2 Outer membrane protein OprG compare
PP_1778 -0.5 -2.5 Lipopolysaccharide ABC export system, permease protein compare
PP_1860 -0.5 -2.0 Organic hydroperoxide resistance transcriptional regulator compare
PP_5473 -0.5 -1.6 putative transcriptional regulator, LuxR family compare
PP_2142 -0.5 -1.4 Cell division inhibitor SulA compare
PP_4254 -0.5 -1.2 conserved protein of unknown function compare
PP_2883 -0.5 -1.0 conserved protein of unknown function compare
PP_0697 -0.5 -2.8 ribosomal-protein-S18-alanine N-acetyltransferase compare
PP_2634 -0.5 -1.9 putative Cellulose synthase compare
PP_2475 -0.5 -2.1 Transcriptional regulator, TetR family compare


Specific Phenotypes

None in this experiment

For Pseudomonas putida KT2440 in temperature experiments