| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -7.0 | -14.2 | alanine racemase (NCBI) | compare |
| b0462 | acrB | -6.2 | -29.0 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -6.2 | -16.4 | multidrug efflux system (NCBI) | compare |
| b4237 | nrdG | -5.4 | -5.2 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -5.0 | -10.1 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -4.6 | -4.6 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4201 | priB | -2.7 | -5.5 | primosomal replication protein N (NCBI) | compare |
| b2330 | yfcB | -2.6 | -1.7 | putative adenine-specific methylase (VIMSS) | compare |
| b1860 | ruvB | -2.2 | -1.5 | Holliday junction DNA helicase B (NCBI) | compare |
| b1334 | fnr | -2.1 | -2.0 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b3035 | tolC | -2.1 | -2.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b4025 | pgi | -2.0 | -11.0 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3390 | aroK | -1.9 | -3.8 | shikimate kinase I (NCBI) | compare |
| b1192 | ldcA | -1.9 | -2.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b0386 | proC | -1.8 | -5.4 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2620 | smpB | -1.8 | -2.0 | SsrA-binding protein (NCBI) | compare |
| b0912 | ihfB | -1.8 | -3.4 | integration host factor subunit beta (NCBI) | compare |
| b2830 | nudH | -1.7 | -1.9 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1850 | eda | -1.5 | -2.5 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2912 | ygfA | -1.5 | -3.4 | putative ligase (VIMSS) | compare |
| b0243 | proA | -1.5 | -9.0 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b0740 | tolB | -1.4 | -3.2 | translocation protein TolB precursor (NCBI) | compare |
| b1861 | ruvA | -1.4 | -1.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3781 | trxA | -1.3 | -5.2 | thioredoxin 1 (VIMSS) | compare |
| b0949 | uup | -1.3 | -8.2 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1187 | fadR | -1.3 | -2.7 | fatty acid metabolism regulator (NCBI) | compare |
| b0902 | pflA | -1.3 | -5.0 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b4503 | yafF | -1.3 | -1.4 | no description | compare |
| b4593 | ymgI | -1.3 | -1.4 | hypothetical protein (RefSeq) | compare |
| b0990 | cspG | -1.2 | -1.4 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2820 | recB | -1.2 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0149 | mrcB | -1.2 | -9.3 | penicillin-binding protein 1b (NCBI) | compare |
| b1123 | potD | -1.2 | -6.4 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b1863 | ruvC | -1.2 | -1.6 | Holliday junction resolvase (NCBI) | compare |
| b3868 | glnG | -1.2 | -6.9 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b0242 | proB | -1.2 | -5.5 | gamma-glutamyl kinase (NCBI) | compare |
| b0053 | surA | -1.1 | -6.3 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0222 | lpcA | -1.1 | -2.4 | phosphoheptose isomerase (NCBI) | compare |
| b2017 | yefM | -1.1 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3183 | obgE | -1.1 | -1.4 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1279 | yciS | -1.0 | -1.8 | conserved inner membrane protein (NCBI) | compare |
| b3619 | rfaD | -1.0 | -3.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1236 | galU | -1.0 | -3.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1125 | potB | -1.0 | -3.6 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0683 | fur | -1.0 | -1.0 | ferric uptake regulator (NCBI) | compare |
| b1712 | ihfA | -0.9 | -0.6 | integration host factor subunit alpha (NCBI) | compare |
| b0738 | tolR | -0.9 | -1.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2297 | pta | -0.9 | -0.6 | phosphate acetyltransferase (NCBI) | compare |
| b1677 | lpp | -0.9 | -1.8 | murein lipoprotein (NCBI) | compare |
| b2699 | recA | -0.9 | -0.6 | recombinase A (NCBI) | compare |
| b1292 | sapC | -0.9 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0303 | ykgI | -0.9 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1124 | potC | -0.9 | -4.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0014 | dnaK | -0.9 | -2.4 | molecular chaperone DnaK (NCBI) | compare |
| b0728 | sucC | -0.9 | -5.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1346 | ydaQ | -0.9 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0903 | pflB | -0.9 | -6.5 | pyruvate formate lyase I (NCBI) | compare |
| b3935 | priA | -0.8 | -3.0 | primosome assembly protein PriA (NCBI) | compare |
| b1551 | b1551 | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b0739 | tolA | -0.8 | -1.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1175 | minD | -0.8 | -4.0 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1286 | rnb | -0.8 | -1.8 | exoribonuclease II (NCBI) | compare |
| b4202 | rpsR | -0.8 | -1.6 | 30S ribosomal protein S18 (NCBI) | compare |
| b2576 | srmB | -0.8 | -2.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b0234 | yafP | -0.8 | -1.6 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b3229 | sspA | -0.8 | -2.0 | stringent starvation protein A (NCBI) | compare |
| b2329 | aroC | -0.8 | -4.9 | chorismate synthase (NCBI) | compare |
| b0729 | sucD | -0.8 | -3.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1273 | yciN | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| b3741 | gidA | -0.8 | -2.3 | glucose-inhibited division protein A (NCBI) | compare |
| b3930 | menA | -0.8 | -6.8 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b1992 | cobS | -0.8 | -2.1 | cobalamin synthase (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b0232 | yafN | -0.8 | -1.0 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2343 | b2343 | -0.7 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1293 | sapB | -0.7 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0564 | appY | -0.7 | -1.4 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1347 | ydaC | -0.7 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b0706 | ybfD | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b3842 | rfaH | -0.7 | -4.2 | transcriptional activator RfaH (NCBI) | compare |
| b2642 | yfjW | -0.7 | -1.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4402 | yjjY | -0.7 | -0.8 | hypothetical protein (NCBI) | compare |
| b1171 | b1171 | -0.7 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1804 | rnd | -0.7 | -3.4 | ribonuclease D (NCBI) | compare |
| b1855 | lpxM | -0.7 | -3.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1126 | potA | -0.7 | -3.6 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b0118 | acnB | -0.7 | -0.5 | aconitate hydratase (NCBI) | compare |
| b0167 | glnD | -0.7 | -2.6 | PII uridylyl-transferase (NCBI) | compare |
| b2659 | b2659 | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2501 | ppk | -0.7 | -5.1 | polyphosphate kinase (NCBI) | compare |
| b0953 | rmf | -0.7 | -1.8 | ribosome modulation factor (NCBI) | compare |
| b2822 | recC | -0.7 | -3.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4177 | purA | -0.7 | -1.5 | adenylosuccinate synthetase (NCBI) | compare |
| b1290 | sapF | -0.7 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2704 | srlB | -0.7 | -4.0 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b3162 | deaD | -0.7 | -2.8 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0200 | gmhB | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b1563 | relE | -0.6 | -1.3 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1147 | ymfL | -0.6 | -2.3 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3806 | cyaA | -0.6 | -4.1 | adenylate cyclase (NCBI) | compare |
| b2625 | yfjI | -0.6 | -1.3 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b3493 | pitA | -0.6 | -4.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b3119 | tdcR | -0.6 | -2.2 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b0603 | ybdO | -0.6 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2024 | hisA | -0.6 | -2.6 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b2951 | yggS | -0.6 | -3.0 | predicted enzyme (NCBI) | compare |
| b4255 | yjgD | -0.6 | -3.0 | hypothetical protein (NCBI) | compare |
| b0908 | aroA | -0.6 | -4.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b0438 | clpX | -0.6 | -3.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1306 | pspC | -0.6 | -2.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b2894 | xerD | -0.6 | -0.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1253 | yciA | -0.6 | -3.1 | predicted hydrolase (NCBI) | compare |
| b4701 | sokX | -0.6 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4436 | ryeC | -0.6 | -1.5 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b4655 | ythA | -0.6 | -0.9 | expressed protein (RefSeq) | compare |
| b4413 | sokC | -0.6 | -1.6 | regulatory antisense RNA (NCBI) | compare |
| b3792 | wzxE | -0.6 | -3.8 | O-antigen translocase (NCBI) | compare |
| b4294 | insA-7 | -0.6 | -1.9 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b1595 | ynfL | -0.6 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4191 | ulaR | -0.5 | -2.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1266 | yciV | -0.5 | -2.9 | hypothetical protein (NCBI) | compare |
| b1862 | yebB | -0.5 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1235 | rssB | -0.5 | -3.6 | response regulator of RpoS (NCBI) | compare |
| b1818 | manY | -0.5 | -2.2 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1258 | yciF | -0.5 | -0.6 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | -0.5 | -1.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0357 | yaiN | -0.5 | -1.5 | putative alpha helix chain (VIMSS) | compare |
| b0500 | ybbD | -0.5 | -0.3 | hypothetical protein (RefSeq) | compare |
| b1176 | minC | -0.5 | -2.0 | septum formation inhibitor (NCBI) | compare |
| b1048 | mdoG | -0.5 | -3.1 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b2567 | rnc | -0.5 | -0.3 | ribonuclease III (NCBI) | compare |
| b4179 | vacB | -0.5 | -3.4 | putative enzyme (VIMSS) | compare |
| b2531 | iscR | -0.5 | -0.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2553 | glnB | -0.5 | -2.3 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3706 | trmE | -0.5 | -2.1 | tRNA modification GTPase (NCBI) | compare |
| b4462 | ygaQ | -0.5 | -1.3 | hypothetical protein (RefSeq) | compare |
| b2215 | ompC | -0.5 | -3.8 | outer membrane porin protein C (NCBI) | compare |
| b3630 | rfaP | -0.5 | -3.9 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1105 | ycfM | -0.5 | -1.6 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0685 | ybfE | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3115 | tdcD | -0.5 | -4.5 | propionate kinase/acetate kinase C, anaerobic (RefSeq) | compare |
| b1497 | b1497 | -0.5 | -0.3 | putative enzyme (VIMSS) | compare |
| b2814 | metZ | -0.5 | -1.2 | tRNA-Met (NCBI) | compare |
| b1648 | b1648 | -0.5 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4048 | yjbM | -0.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b2299 | yfcD | -0.5 | -2.6 | predicted NUDIX hydrolase (NCBI) | compare |
| b2313 | cvpA | -0.5 | -2.7 | membrane protein required for colicin V production (NCBI) | compare |
| b4497 | yeeL | -0.5 | -0.7 | no description | compare |
| b1493 | gadB | -0.5 | -0.8 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1865 | nudB | -0.5 | -0.8 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2055 | wcaE | -0.5 | -0.2 | predicted glycosyl transferase (NCBI) | compare |
| b3620 | rfaF | -0.5 | -2.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3636 | rpmG | -0.5 | -1.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b3609 | secB | -0.5 | -2.5 | export protein SecB (NCBI) | compare |
| b3052 | rfaE | -0.5 | -2.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1522 | yneF | -0.5 | -2.5 | predicted diguanylate cyclase (NCBI) | compare |
| b4545 | ypdJ | -0.5 | -1.7 | no description | compare |
| b0437 | clpP | -0.5 | -2.4 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0145 | dksA | -0.5 | -1.6 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3405 | ompR | -0.5 | -2.0 | osmolarity response regulator (NCBI) | compare |
| b0741 | pal | -0.5 | -1.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1628 | rsxB | -0.4 | -1.8 | electron transport complex protein RnfB (NCBI) | compare |
| b0688 | pgm | -0.4 | -1.6 | phosphoglucomutase (NCBI) | compare |
| b4375 | prfC | -0.4 | -1.4 | peptide chain release factor 3 (NCBI) | compare |
| b1593 | b1593 | -0.4 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1827 | kdgR | -0.4 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1728 | ydjM | -0.4 | -1.4 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b4523 | yciX | -0.4 | -2.5 | hypothetical protein (RefSeq) | compare |
| b2007 | yeeX | -0.4 | -2.0 | conserved protein (RefSeq) | compare |
| b3631 | rfaG | -0.4 | -3.9 | glucosyltransferase I (NCBI) | compare |
| b3290 | trkA | -0.4 | -0.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b1001 | yccE | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b3387 | dam | -0.4 | -3.4 | DNA adenine methylase (NCBI) | compare |
| b3621 | rfaC | -0.4 | -1.9 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0237 | pepD | -0.4 | -3.3 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b1617 | uidA | -0.4 | -2.8 | beta-D-glucuronidase (NCBI) | compare |
| b2318 | truA | -0.4 | -0.9 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0049 | apaH | -0.4 | -1.0 | diadenosinetetraphosphatase (NCBI) | compare |
| b1291 | sapD | -0.4 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0998 | torD | -0.4 | -0.8 | chaperone protein TorD (NCBI) | compare |
| b1049 | mdoH | -0.4 | -3.0 | glucosyltransferase MdoH (NCBI) | compare |
| b3465 | yhhF | -0.4 | -2.8 | predicted methyltransferase (NCBI) | compare |
| b0082 | mraW | -0.4 | -2.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0890 | ftsK | -0.4 | -1.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0957 | ompA | -0.4 | -2.0 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b1594 | dgsA | -0.4 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0705 | ybfL | -0.4 | -0.3 | putative receptor protein (VIMSS) | compare |
| b2540 | hcaC | -0.4 | -1.7 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) | compare |
| b1148 | ymfM | -0.4 | -1.8 | e14 prophage; predicted protein (NCBI) | compare |
| b1984 | asnW | -0.4 | -0.8 | tRNA-Asn (NCBI) | compare |
| b1572 | ydfB | -0.4 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -0.4 | -0.7 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4702 | mgtL | -0.4 | -0.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b2369 | evgA | -0.4 | -1.8 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b1499 | ydeO | -0.4 | -0.2 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b2352 | yfdI | -0.4 | -0.5 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b4151 | frdD | -0.4 | -1.3 | fumarate reductase subunit D (NCBI) | compare |
| b4435 | isrC | -0.4 | -1.5 | unknown RNA (NCBI) | compare |
| b1550 | b1550 | -0.4 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1516 | lsrB | -0.4 | -1.2 | AI2 transporter (NCBI) | compare |