| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -8.1 | -11.0 | alanine racemase (NCBI) | compare |
| b4237 | nrdG | -5.8 | -5.7 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -5.3 | -10.7 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -5.1 | -4.8 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4025 | pgi | -3.5 | -13.6 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1334 | fnr | -3.4 | -3.2 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2620 | smpB | -2.9 | -2.6 | SsrA-binding protein (NCBI) | compare |
| b4402 | yjjY | -2.8 | -1.6 | hypothetical protein (NCBI) | compare |
| b1850 | eda | -2.8 | -4.6 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0949 | uup | -2.4 | -16.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0386 | proC | -2.4 | -7.0 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2330 | yfcB | -2.3 | -2.1 | putative adenine-specific methylase (VIMSS) | compare |
| b1124 | potC | -2.0 | -11.7 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1123 | potD | -1.9 | -8.8 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b0243 | proA | -1.9 | -12.6 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b0200 | gmhB | -1.9 | -2.3 | hypothetical protein (NCBI) | compare |
| b1125 | potB | -1.8 | -6.3 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0242 | proB | -1.8 | -8.3 | gamma-glutamyl kinase (NCBI) | compare |
| b4375 | prfC | -1.8 | -2.7 | peptide chain release factor 3 (NCBI) | compare |
| b0145 | dksA | -1.8 | -5.1 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4676 | yoaK | -1.8 | -1.0 | expressed protein (RefSeq) | compare |
| b1126 | potA | -1.7 | -11.7 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2912 | ygfA | -1.6 | -3.9 | putative ligase (VIMSS) | compare |
| b1860 | ruvB | -1.6 | -2.0 | Holliday junction DNA helicase B (NCBI) | compare |
| b0739 | tolA | -1.6 | -3.6 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0688 | pgm | -1.6 | -5.1 | phosphoglucomutase (NCBI) | compare |
| b2017 | yefM | -1.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3035 | tolC | -1.5 | -5.8 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0014 | dnaK | -1.5 | -5.1 | molecular chaperone DnaK (NCBI) | compare |
| b3977 | tyrU | -1.4 | -1.5 | tRNA-Tyr (NCBI) | compare |
| b3706 | trmE | -1.3 | -4.4 | tRNA modification GTPase (NCBI) | compare |
| b3839 | tatC | -1.3 | -6.8 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0737 | tolQ | -1.3 | -2.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0902 | pflA | -1.3 | -5.9 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b2808 | gcvA | -1.3 | -5.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3741 | gidA | -1.2 | -3.3 | glucose-inhibited division protein A (NCBI) | compare |
| b3619 | rfaD | -1.2 | -4.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0142 | folK | -1.2 | -1.0 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b3405 | ompR | -1.2 | -5.0 | osmolarity response regulator (NCBI) | compare |
| b0741 | pal | -1.1 | -3.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3868 | glnG | -1.1 | -7.5 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1551 | b1551 | -1.1 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3842 | rfaH | -1.1 | -6.2 | transcriptional activator RfaH (NCBI) | compare |
| b1677 | lpp | -1.1 | -3.3 | murein lipoprotein (NCBI) | compare |
| b3162 | deaD | -1.1 | -5.2 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3781 | trxA | -1.1 | -6.1 | thioredoxin 1 (VIMSS) | compare |
| b0053 | surA | -1.1 | -6.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1730 | ydjO | -1.0 | -1.7 | predicted protein (RefSeq) | compare |
| b2659 | b2659 | -1.0 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b4066 | yjcF | -1.0 | -0.7 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | -1.0 | -5.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1290 | sapF | -1.0 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3183 | obgE | -1.0 | -1.5 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b0728 | sucC | -1.0 | -6.4 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4593 | ymgI | -1.0 | -1.3 | hypothetical protein (RefSeq) | compare |
| b0303 | ykgI | -1.0 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0903 | pflB | -1.0 | -7.8 | pyruvate formate lyase I (NCBI) | compare |
| b0908 | aroA | -0.9 | -6.7 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2297 | pta | -0.9 | -0.8 | phosphate acetyltransferase (NCBI) | compare |
| b2576 | srmB | -0.9 | -3.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b1048 | mdoG | -0.9 | -4.9 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0167 | glnD | -0.9 | -4.3 | PII uridylyl-transferase (NCBI) | compare |
| b0738 | tolR | -0.9 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2820 | recB | -0.9 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0222 | lpcA | -0.9 | -2.5 | phosphoheptose isomerase (NCBI) | compare |
| b2329 | aroC | -0.9 | -4.9 | chorismate synthase (NCBI) | compare |
| b4177 | purA | -0.9 | -2.2 | adenylosuccinate synthetase (NCBI) | compare |
| b3500 | gor | -0.9 | -2.2 | glutathione reductase (NCBI) | compare |
| b3389 | aroB | -0.9 | -7.2 | 3-dehydroquinate synthase (NCBI) | compare |
| b1049 | mdoH | -0.8 | -6.8 | glucosyltransferase MdoH (NCBI) | compare |
| b0237 | pepD | -0.8 | -6.0 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b4202 | rpsR | -0.8 | -1.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b0149 | mrcB | -0.8 | -7.2 | penicillin-binding protein 1b (NCBI) | compare |
| b2830 | nudH | -0.8 | -1.4 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1171 | b1171 | -0.8 | -3.6 | orf, hypothetical protein (VIMSS) | compare |
| b1192 | ldcA | -0.8 | -1.7 | L,D-carboxypeptidase A (NCBI) | compare |
| b1861 | ruvA | -0.8 | -1.1 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3390 | aroK | -0.8 | -2.0 | shikimate kinase I (NCBI) | compare |
| b3930 | menA | -0.8 | -7.0 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b4685 | yrbN | -0.8 | -2.8 | expressed protein (RefSeq) | compare |
| b0890 | ftsK | -0.8 | -2.9 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1628 | rsxB | -0.8 | -4.3 | electron transport complex protein RnfB (NCBI) | compare |
| b0232 | yafN | -0.8 | -1.0 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1863 | ruvC | -0.8 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b3281 | aroE | -0.8 | -6.9 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b4462 | ygaQ | -0.8 | -2.0 | hypothetical protein (RefSeq) | compare |
| b1236 | galU | -0.8 | -3.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1291 | sapD | -0.8 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3493 | pitA | -0.8 | -5.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b0603 | ybdO | -0.8 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3631 | rfaG | -0.8 | -6.9 | glucosyltransferase I (NCBI) | compare |
| b4535 | yniD | -0.8 | -1.1 | predicted protein (RefSeq) | compare |
| b4552 | yrhC | -0.8 | -1.3 | no description | compare |
| b1286 | rnb | -0.8 | -2.4 | exoribonuclease II (NCBI) | compare |
| b2318 | truA | -0.8 | -2.8 | tRNA pseudouridine synthase A (NCBI) | compare |
| b2450 | yffS | -0.8 | -2.1 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1593 | b1593 | -0.7 | -3.6 | orf, hypothetical protein (VIMSS) | compare |
| b3916 | pfkA | -0.7 | -2.5 | 6-phosphofructokinase (NCBI) | compare |
| b4131 | cadA | -0.7 | -6.8 | lysine decarboxylase 1 (NCBI) | compare |
| b3052 | rfaE | -0.7 | -3.4 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0729 | sucD | -0.7 | -3.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1159 | mcrA | -0.7 | -1.4 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b2501 | ppk | -0.7 | -5.3 | polyphosphate kinase (NCBI) | compare |
| b1346 | ydaQ | -0.7 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4647 | mokA | -0.7 | -1.0 | no description | compare |
| b3495 | uspA | -0.7 | -6.3 | universal stress global response regulator (NCBI) | compare |
| b3375 | yhfR | -0.7 | -5.3 | putative transcriptional regulator (VIMSS) | compare |
| b2498 | upp | -0.7 | -2.2 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1842 | holE | -0.7 | -2.7 | DNA polymerase III, theta subunit (NCBI) | compare |
| b2393 | nupC | -0.7 | -5.3 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3169 | nusA | -0.7 | -2.2 | transcription elongation factor NusA (NCBI) | compare |
| b0437 | clpP | -0.7 | -4.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1497 | b1497 | -0.7 | -0.4 | putative enzyme (VIMSS) | compare |
| b3863 | polA | -0.7 | -0.7 | DNA polymerase I (NCBI) | compare |
| b1001 | yccE | -0.7 | -0.3 | hypothetical protein (NCBI) | compare |
| b2055 | wcaE | -0.7 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b1182 | hlyE | -0.6 | -0.5 | hemolysin E (VIMSS) | compare |
| b1161 | ycgX | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b0740 | tolB | -0.6 | -2.0 | translocation protein TolB precursor (NCBI) | compare |
| b3911 | cpxA | -0.6 | -4.8 | two-component sensor protein (NCBI) | compare |
| b2567 | rnc | -0.6 | -0.3 | ribonuclease III (NCBI) | compare |
| b4132 | cadB | -0.6 | -5.8 | predicted lysine/cadaverine transporter (NCBI) | compare |
| b1658 | purR | -0.6 | -4.2 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b2569 | lepA | -0.6 | -3.1 | GTP-binding protein LepA (NCBI) | compare |
| b0009 | mog | -0.6 | -4.6 | molybdenum cofactor biosynthesis protein (NCBI) | compare |
| b1167 | ymgC | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b1165 | ymgA | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b0500 | ybbD | -0.6 | -0.3 | hypothetical protein (RefSeq) | compare |
| b4151 | frdD | -0.6 | -3.0 | fumarate reductase subunit D (NCBI) | compare |
| b1187 | fadR | -0.6 | -2.8 | fatty acid metabolism regulator (NCBI) | compare |
| b1693 | aroD | -0.6 | -3.4 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1936 | intG | -0.6 | -0.9 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b2168 | fruK | -0.6 | -1.0 | 1-phosphofructokinase (NCBI) | compare |
| b1025 | ycdT | -0.6 | -1.5 | predicted diguanylate cyclase (NCBI) | compare |
| b0658 | ybeX | -0.6 | -0.6 | predicteed ion transport (NCBI) | compare |
| b1257 | yciE | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b2652 | ileY | -0.6 | -0.8 | tRNA-Ile (NCBI) | compare |
| b4384 | deoD | -0.6 | -4.6 | purine nucleoside phosphorylase (NCBI) | compare |
| b2531 | iscR | -0.6 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0705 | ybfL | -0.6 | -0.4 | putative receptor protein (VIMSS) | compare |
| b3630 | rfaP | -0.6 | -4.9 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1576 | ydfD | -0.6 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1235 | rssB | -0.6 | -3.4 | response regulator of RpoS (NCBI) | compare |
| b1499 | ydeO | -0.6 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b3621 | rfaC | -0.6 | -2.8 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4702 | mgtL | -0.6 | -1.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0685 | ybfE | -0.6 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3075 | ebgR | -0.6 | -3.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0438 | clpX | -0.6 | -3.8 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b3636 | rpmG | -0.6 | -1.5 | 50S ribosomal protein L33 (NCBI) | compare |
| b0623 | cspE | -0.6 | -1.8 | cold shock protein E (NCBI) | compare |
| b1855 | lpxM | -0.5 | -2.8 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3180 | yhbY | -0.5 | -3.1 | predicted RNA-binding protein (NCBI) | compare |
| b3469 | zntA | -0.5 | -4.4 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b2024 | hisA | -0.5 | -1.8 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b1368 | ynaA | -0.5 | -1.9 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b3124 | garK | -0.5 | -4.2 | glycerate kinase I (RefSeq) | compare |
| b0948 | ycbY | -0.5 | -3.4 | predicted methyltransferase (NCBI) | compare |
| b2262 | menB | -0.5 | -1.9 | naphthoate synthase (NCBI) | compare |
| b1804 | rnd | -0.5 | -3.1 | ribonuclease D (NCBI) | compare |
| b1874 | cutC | -0.5 | -1.4 | copper homeostasis protein (NCBI) | compare |
| b4201 | priB | -0.5 | -1.4 | primosomal replication protein N (NCBI) | compare |
| b1088 | yceD | -0.5 | -2.7 | hypothetical protein (NCBI) | compare |
| b1582 | ynfA | -0.5 | -1.2 | hypothetical protein (NCBI) | compare |
| b0990 | cspG | -0.5 | -1.0 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0881 | clpS | -0.5 | -1.1 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b4178 | yjeB | -0.5 | -3.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2352 | yfdI | -0.5 | -0.7 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b4163 | glyV | -0.5 | -1.2 | tRNA-Gly (NCBI) | compare |
| b1130 | phoP | -0.5 | -0.9 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0051 | ksgA | -0.5 | -2.6 | dimethyladenosine transferase (NCBI) | compare |
| b3884 | yihW | -0.5 | -3.5 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b2512 | yfgL | -0.5 | -3.1 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b4153 | frdB | -0.5 | -4.0 | fumarate reductase (anaerobic), Fe-S subunit (NCBI) | compare |
| b2104 | thiM | -0.5 | -1.9 | hydroxyethylthiazole kinase (NCBI) | compare |
| b4179 | vacB | -0.5 | -3.3 | putative enzyme (VIMSS) | compare |
| b3387 | dam | -0.5 | -4.0 | DNA adenine methylase (NCBI) | compare |
| b0767 | ybhE | -0.5 | -2.9 | 6-phosphogluconolactonase (NCBI) | compare |
| b4383 | deoB | -0.5 | -3.5 | phosphopentomutase (NCBI) | compare |
| b1690 | ydiM | -0.5 | -1.7 | predicted transporter (NCBI) | compare |
| b4414 | tff | -0.5 | -1.3 | unknown RNA (NCBI) | compare |
| b1630 | rsxD | -0.5 | -2.9 | electron transport complex protein RnfD (NCBI) | compare |
| b1648 | b1648 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3838 | tatB | -0.5 | -3.2 | sec-independent translocase (NCBI) | compare |
| b2081 | yegQ | -0.5 | -3.7 | predicted peptidase (NCBI) | compare |
| b1754 | b1754 | -0.5 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1877 | yecT | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2642 | yfjW | -0.5 | -0.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0912 | ihfB | -0.5 | -1.2 | integration host factor subunit beta (NCBI) | compare |
| b0226 | dinJ | -0.5 | -2.2 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3210 | arcB | -0.5 | -2.7 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2343 | b2343 | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1438 | ydcQ | -0.5 | -1.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1253 | yciA | -0.5 | -2.9 | predicted hydrolase (NCBI) | compare |
| b4443 | gcvB | -0.4 | -0.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b2741 | rpoS | -0.4 | -2.7 | RNA polymerase sigma factor (NCBI) | compare |
| b4436 | ryeC | -0.4 | -0.9 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b2259 | pmrD | -0.4 | -1.0 | polymyxin resistance protein B (VIMSS) | compare |
| b1540 | ydfH | -0.4 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2319 | usg | -0.4 | -2.6 | hypothetical protein (NCBI) | compare |