| | gene | name | fitness | t score | description | |
|---|
| b1361 | ydaW | +1.1 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1185 | dsbB | +1.0 | 3.5 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b3860 | dsbA | +0.9 | 8.5 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b4538 | yoeF | +0.8 | 2.0 | hypothetical protein (RefSeq) | compare |
| b1348 | lar | +0.7 | 2.1 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b2859 | ygeO | +0.7 | 1.9 | hypothetical protein (RefSeq) | compare |
| b0802 | ybiJ | +0.7 | 2.2 | hypothetical protein (NCBI) | compare |
| b1765 | ydjA | +0.7 | 1.1 | predicted oxidoreductase (NCBI) | compare |
| b1573 | ydfC | +0.6 | 1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b0630 | lipB | +0.6 | 1.1 | protein of lipoate biosynthesis (VIMSS) | compare |
| b0542 | renD | +0.6 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2156 | lysP | +0.6 | 5.3 | lysine transporter (NCBI) | compare |
| b2934 | cmtB | +0.6 | 0.5 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1476 | fdnI | +0.6 | 1.0 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1733 | chbG | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1332 | ynaJ | +0.5 | 0.4 | predicted inner membrane protein (NCBI) | compare |
| b1357 | ydaS | +0.5 | 2.1 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0798 | ybiA | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b1686 | ydiI | +0.5 | 1.0 | hypothetical protein (NCBI) | compare |
| b3961 | oxyR | +0.4 | 3.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1195 | ymgE | +0.4 | 1.8 | predicted inner membrane protein (NCBI) | compare |
| b1558 | cspF | +0.4 | 1.9 | Qin prophage; cold shock protein (NCBI) | compare |
| b1753 | ynjA | +0.4 | 1.7 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | +0.4 | 2.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4596 | yciZ | +0.4 | 1.1 | hypothetical protein (RefSeq) | compare |
| b0183 | rnhB | +0.4 | 2.3 | ribonuclease HII (NCBI) | compare |
| b3786 | rffE | +0.4 | 3.5 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3120 | yhaB | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1709 | btuD | +0.4 | 0.8 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1143 | ymfI | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1205 | ychH | +0.4 | 0.8 | predicted inner membrane protein (NCBI) | compare |
| b2399 | yfeD | +0.4 | 2.0 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4363 | yjjB | +0.4 | 2.4 | conserved inner membrane protein (RefSeq) | compare |
| b2915 | yqfE | +0.4 | 1.9 | hypothetical protein (RefSeq) | compare |
| b4698 | mgrR | +0.4 | 2.2 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b3280 | yrdB | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b0456 | ybaA | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b3791 | rffA | +0.4 | 2.9 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1070 | flgN | +0.4 | 1.0 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1134 | ymfB | +0.4 | 1.6 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b1724 | ydiZ | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b3794 | rffM | +0.4 | 2.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3787 | rffD | +0.4 | 3.0 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4704 | arrS | +0.4 | 0.2 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b4573 | insZ | +0.3 | 2.0 | no description | compare |
| b4653 | yicT | +0.3 | 0.9 | no description | compare |
| b1831 | proQ | +0.3 | 1.5 | putative solute/DNA competence effector (NCBI) | compare |
| b1530 | marR | +0.3 | 1.9 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b4640 | yoeG | +0.3 | 1.3 | no description | compare |
| b3790 | rffC | +0.3 | 2.3 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3483 | yhhH | +0.3 | 0.1 | orf, hypothetical protein (VIMSS) | compare |
| b0946 | ycbW | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0212 | gloB | +0.3 | 1.8 | predicted hydroxyacylglutathione hydrolase (NCBI) | compare |
| b1502 | ydeQ | +0.3 | 1.2 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1448 | yncA | +0.3 | 0.9 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0521 | ybcF | +0.3 | 2.1 | predicted carbamate kinase (NCBI) | compare |
| b4699 | fnrS | +0.3 | 0.5 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b4406 | yaeP | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b2096 | gatY | +0.3 | 2.2 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b2689 | yqaA | +0.3 | 2.0 | conserved inner membrane protein (NCBI) | compare |
| b2208 | napF | +0.3 | 1.8 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) | compare |
| b1138 | ymfE | +0.3 | 0.9 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1434 | ydcN | +0.3 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0730 | mngR | +0.3 | 0.6 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3658 | selC | +0.3 | 1.3 | tRNA-Sec (NCBI) | compare |
| b2044 | wcaL | +0.3 | 1.3 | predicted glycosyl transferase (NCBI) | compare |
| b0944 | ycbF | +0.3 | 1.8 | putative chaperone (VIMSS) | compare |
| b4660 | yhiL | +0.3 | 0.2 | no description | compare |
| b1566 | flxA | +0.3 | 1.5 | Qin prophage; predicted protein (NCBI) | compare |
| b0393 | rdgC | +0.3 | 2.3 | recombination associated protein (NCBI) | compare |
| b3979 | thrT | +0.3 | 0.1 | tRNA-Thr (NCBI) | compare |
| b2587 | kgtP | +0.3 | 2.1 | alpha-ketoglutarate transporter (NCBI) | compare |
| b1252 | tonB | +0.3 | 1.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b0192 | nlpE | +0.3 | 2.2 | lipoprotein involved with copper homeostasis and adhesion (NCBI) | compare |
| b1930 | yedF | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b4515 | ybgT | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b1656 | sodB | +0.3 | 1.2 | superoxide dismutase, Fe (NCBI) | compare |
| b3100 | yqjK | +0.3 | 2.0 | hypothetical protein (NCBI) | compare |
| b1849 | purT | +0.3 | 2.1 | phosphoribosylglycinamide formyltransferase 2 (NCBI) | compare |
| b1742 | b1742 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2432 | yfeY | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b3206 | npr | +0.3 | 2.0 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b2051 | wcaH | +0.3 | 1.1 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b4042 | dgkA | +0.3 | 0.2 | diacylglycerol kinase (NCBI) | compare |
| b1408 | b1408 | +0.3 | 1.8 | probable enzyme (VIMSS) | compare |
| b4642 | yoeD | +0.3 | 1.0 | no description | compare |
| b4336 | yjiN | +0.3 | 2.2 | conserved inner membrane protein (NCBI) | compare |
| b2356 | yfdM | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4345 | mcrC | +0.3 | 0.5 | 5-methylcytosine-specific restriction enzyme McrBC, subunit McrC (NCBI) | compare |
| b2362 | yfdS | +0.3 | 1.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1339 | abgR | +0.3 | 1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0852 | rimK | +0.3 | 1.6 | ribosomal protein S6 modification protein (NCBI) | compare |
| b4687 | shoB | +0.3 | 1.6 | toxic membrane protein (RefSeq) | compare |
| b1038 | csgF | +0.3 | 1.4 | predicted transport protein (NCBI) | compare |
| b2264 | menD | +0.3 | 2.4 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b1045 | ymdB | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b2433 | b2433 | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1305 | pspB | +0.3 | 1.1 | phage shock protein B (NCBI) | compare |
| b1790 | yeaM | +0.3 | 1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4367 | fhuF | +0.3 | 2.2 | ferric iron reductase involved in ferric hydroximate transport (NCBI) | compare |
| b1698 | ydiR | +0.3 | 1.5 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b1153 | ymfQ | +0.3 | 1.5 | e14 prophage; conserved protein (NCBI) | compare |
| b1603 | pntA | +0.3 | 1.7 | NAD(P) transhydrogenase subunit alpha (NCBI) | compare |
| b3784 | rfe | +0.3 | 2.4 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1520 | b1520 | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1858 | znuC | +0.3 | 2.0 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b4360 | yjjA | +0.3 | 1.4 | putative glycoprotein/receptor (VIMSS) | compare |
| b1919 | yedO | +0.3 | 0.9 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b1633 | nth | +0.3 | 1.8 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b0617 | citD | +0.3 | 0.9 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b3156 | yhbS | +0.3 | 2.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0641 | rlpB | +0.3 | 1.1 | minor lipoprotein (NCBI) | compare |
| b1768 | ydjB | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1172 | ymgG | +0.3 | 1.8 | conserved protein, UPF0757 family (RefSeq) | compare |
| b3152 | yraR | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0961 | yccF | +0.3 | 1.6 | conserved inner membrane protein (NCBI) | compare |
| b1961 | dcm | +0.3 | 0.6 | DNA cytosine methylase (NCBI) | compare |
| b1875 | yecM | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3623 | rfaK | +0.3 | 0.9 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b2565 | recO | +0.3 | 1.2 | DNA repair protein RecO (NCBI) | compare |
| b1847 | yebF | +0.3 | 0.7 | predicted protein (RefSeq) | compare |
| b0187 | yaeR | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0381 | ddlA | +0.3 | 1.9 | D-alanylalanine synthetase (NCBI) | compare |
| b2250 | b2250 | +0.2 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1113 | ycfS | +0.2 | 1.9 | hypothetical protein (NCBI) | compare |
| b4144 | yjeI | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1977 | asnT | +0.2 | 1.1 | tRNA-Asn (NCBI) | compare |
| b2209 | eco | +0.2 | 0.9 | ecotin precursor (NCBI) | compare |
| b1480 | sra | +0.2 | 0.5 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1515 | lsrD | +0.2 | 1.6 | AI2 transporter (NCBI) | compare |
| b4045 | yjbJ | +0.2 | 1.0 | predicted stress response protein (NCBI) | compare |
| b2165 | yeiN | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b1063 | yceB | +0.2 | 1.1 | predicted lipoprotein (NCBI) | compare |
| b0682 | ybfN | +0.2 | 1.5 | predicted lipoprotein (NCBI) | compare |
| b4513 | kdpF | +0.2 | 0.8 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2900 | yqfB | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b4376 | osmY | +0.2 | 1.5 | periplasmic protein (NCBI) | compare |
| b3099 | yqjE | +0.2 | 1.3 | conserved inner membrane protein (NCBI) | compare |
| b4157 | yjeN | +0.2 | 0.7 | hypothetical protein (NCBI) | compare |
| b3484 | yhhI | +0.2 | 1.0 | predicted transposase (NCBI) | compare |
| b2743 | pcm | +0.2 | 1.6 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b0843 | ybjH | +0.2 | 0.8 | hypothetical protein (NCBI) | compare |
| b1950 | fliR | +0.2 | 1.1 | flagellar biosynthesis protein R (NCBI) | compare |
| b1882 | cheY | +0.2 | 0.2 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1310 | ycjN | +0.2 | 1.6 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b0296 | ykgM | +0.2 | 1.4 | 50S ribosomal protein L31 (NCBI) | compare |
| b1233 | ychJ | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b1355 | b1355 | +0.2 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3291 | mscL | +0.2 | 1.8 | large-conductance mechanosensitive channel (NCBI) | compare |
| b2195 | ccmG | +0.2 | 0.7 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b3198 | kdsC | +0.2 | 1.4 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2534 | yfhR | +0.2 | 1.9 | predicted peptidase (RefSeq) | compare |
| b1034 | ycdX | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b4015 | aceA | +0.2 | 1.4 | isocitrate lyase (NCBI) | compare |
| b3962 | udhA | +0.2 | 1.8 | putative oxidoreductase (VIMSS) | compare |
| b1789 | yeaL | +0.2 | 1.1 | conserved inner membrane protein (NCBI) | compare |
| b1144 | ymfJ | +0.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2645 | yfjZ | +0.2 | 1.3 | CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1660 | ydhC | +0.2 | 1.3 | predicted transporter (NCBI) | compare |
| b1238 | tdk | +0.2 | 1.4 | thymidine kinase (NCBI) | compare |
| b1800 | yeaU | +0.2 | 1.7 | predicted dehydrogenase (NCBI) | compare |
| b3698 | yidB | +0.2 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0844 | b0844 | +0.2 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4387 | ytjB | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b0933 | ssuB | +0.2 | 1.2 | alkanesulfonate transporter subunit (NCBI) | compare |
| b1524 | yneH | +0.2 | 0.4 | predicted glutaminase (NCBI) | compare |
| b2996 | hybA | +0.2 | 1.9 | hydrogenase 2 4Fe-4S ferredoxin-type component (NCBI) | compare |
| b2532 | yfhQ | +0.2 | 1.5 | predicted methyltransferase (NCBI) | compare |
| b4522 | yciX_1 | +0.2 | 0.8 | hypothetical protein (NCBI) | compare |
| b4571 | wbbL | +0.2 | 1.0 | no description | compare |
| b2010 | dacD | +0.2 | 1.5 | penicillin binding protein 6b (VIMSS) | compare |
| b1035 | ycdY | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b2782 | chpA | +0.2 | 1.4 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b1792 | yeaO | +0.2 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0714 | nei | +0.2 | 1.6 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b3725 | pstB | +0.2 | 0.1 | phosphate transporter subunit (NCBI) | compare |
| b1764 | selD | +0.2 | 1.1 | selenophosphate synthetase (NCBI) | compare |
| b0596 | entA | +0.2 | 1.3 | 2,3-dihydroxybenzoate-2,3-dehydrogenase (NCBI) | compare |
| b4686 | yshB | +0.2 | 1.0 | expressed protein (RefSeq) | compare |
| b4561 | insM | +0.2 | 1.1 | transposase (RefSeq) | compare |
| b1258 | yciF | +0.2 | 0.4 | hypothetical protein (NCBI) | compare |
| b4395 | ytjC | +0.2 | 1.1 | phosphoglycerate mutase (NCBI) | compare |
| b2488 | hyfH | +0.2 | 1.1 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b1611 | fumC | +0.2 | 1.6 | fumarate hydratase (NCBI) | compare |
| b0731 | mngA | +0.2 | 1.5 | fused 2-O-a-mannosyl-D-glycerate specific PTS enzymes: IIA component/IIB component/IIC component (NCBI) | compare |
| b3775 | ppiC | +0.2 | 0.9 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b3037 | ygiB | +0.2 | 1.2 | conserved outer membrane protein (RefSeq) | compare |
| b3163 | nlpI | +0.2 | 1.2 | hypothetical protein (NCBI) | compare |
| b2617 | smpA | +0.2 | 1.0 | small membrane protein A (VIMSS) | compare |
| b4358 | yjjN | +0.2 | 1.7 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (RefSeq) | compare |
| b1335 | ogt | +0.2 | 1.0 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b3844 | fre | +0.2 | 1.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1323 | tyrR | +0.2 | 1.6 | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | compare |
| b1427 | rimL | +0.2 | 0.8 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b1287 | yciW | +0.2 | 1.2 | putative oxidoreductase (VIMSS) | compare |
| b1562 | hokD | +0.2 | 0.9 | Qin prophage; small toxic polypeptide (NCBI) | compare |
| b1963 | b1963 | +0.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2221 | atoD | +0.2 | 0.9 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b2769 | ygcQ | +0.2 | 1.4 | putative flavoprotein (VIMSS) | compare |
| b2103 | thiD | +0.2 | 1.5 | phosphomethylpyrimidine kinase (NCBI) | compare |