| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -7.2 | -12.1 | alanine racemase (NCBI) | compare |
| b4041 | plsB | -6.0 | -3.8 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4237 | nrdG | -5.7 | -3.9 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -4.5 | -12.9 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b1850 | eda | -4.3 | -5.1 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b4025 | pgi | -3.9 | -14.1 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1334 | fnr | -3.1 | -3.0 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0386 | proC | -2.3 | -5.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0949 | uup | -2.1 | -11.7 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4593 | ymgI | -2.0 | -1.8 | hypothetical protein (RefSeq) | compare |
| b3781 | trxA | -1.8 | -6.5 | thioredoxin 1 (VIMSS) | compare |
| b0902 | pflA | -1.6 | -6.6 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b4202 | rpsR | -1.6 | -2.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b4177 | purA | -1.5 | -2.1 | adenylosuccinate synthetase (NCBI) | compare |
| b1123 | potD | -1.5 | -6.9 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b0243 | proA | -1.5 | -8.9 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b1236 | galU | -1.4 | -5.1 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0990 | cspG | -1.4 | -2.2 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1126 | potA | -1.3 | -6.4 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1124 | potC | -1.3 | -7.5 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0049 | apaH | -1.3 | -2.5 | diadenosinetetraphosphatase (NCBI) | compare |
| b4647 | mokA | -1.3 | -1.4 | no description | compare |
| b0014 | dnaK | -1.2 | -3.4 | molecular chaperone DnaK (NCBI) | compare |
| b3916 | pfkA | -1.2 | -2.9 | 6-phosphofructokinase (NCBI) | compare |
| b1125 | potB | -1.2 | -6.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1860 | ruvB | -1.2 | -1.3 | Holliday junction DNA helicase B (NCBI) | compare |
| b0242 | proB | -1.2 | -5.2 | gamma-glutamyl kinase (NCBI) | compare |
| b0739 | tolA | -1.1 | -2.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3868 | glnG | -1.1 | -6.6 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1049 | mdoH | -1.1 | -7.6 | glucosyltransferase MdoH (NCBI) | compare |
| b1048 | mdoG | -1.1 | -5.8 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b2912 | ygfA | -1.1 | -2.7 | putative ligase (VIMSS) | compare |
| b3619 | rfaD | -1.1 | -3.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0142 | folK | -1.1 | -0.8 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1863 | ruvC | -1.1 | -1.8 | Holliday junction resolvase (NCBI) | compare |
| b1551 | b1551 | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2297 | pta | -1.0 | -0.7 | phosphate acetyltransferase (NCBI) | compare |
| b2576 | srmB | -1.0 | -3.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b3621 | rfaC | -1.0 | -4.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2330 | yfcB | -1.0 | -1.2 | putative adenine-specific methylase (VIMSS) | compare |
| b3389 | aroB | -1.0 | -7.9 | 3-dehydroquinate synthase (NCBI) | compare |
| b2659 | b2659 | -1.0 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b4535 | yniD | -1.0 | -2.0 | predicted protein (RefSeq) | compare |
| b0564 | appY | -1.0 | -1.7 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b0737 | tolQ | -0.9 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0738 | tolR | -0.9 | -1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2329 | aroC | -0.9 | -5.0 | chorismate synthase (NCBI) | compare |
| b0912 | ihfB | -0.9 | -2.1 | integration host factor subunit beta (NCBI) | compare |
| b3281 | aroE | -0.9 | -7.9 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0903 | pflB | -0.9 | -7.1 | pyruvate formate lyase I (NCBI) | compare |
| b3162 | deaD | -0.9 | -4.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0908 | aroA | -0.9 | -5.7 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b0890 | ftsK | -0.8 | -2.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1192 | ldcA | -0.8 | -1.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b0145 | dksA | -0.8 | -2.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0053 | surA | -0.8 | -5.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1347 | ydaC | -0.8 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b1231 | tyrT | -0.8 | -1.4 | tRNA-Tyr (NCBI) | compare |
| b3493 | pitA | -0.8 | -5.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b4676 | yoaK | -0.8 | -0.6 | expressed protein (RefSeq) | compare |
| b3052 | rfaE | -0.8 | -3.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2479 | gcvR | -0.8 | -4.5 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2352 | yfdI | -0.8 | -0.8 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b3741 | gidA | -0.8 | -2.2 | glucose-inhibited division protein A (NCBI) | compare |
| b0957 | ompA | -0.8 | -3.6 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3035 | tolC | -0.7 | -3.0 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3631 | rfaG | -0.7 | -6.6 | glucosyltransferase I (NCBI) | compare |
| b3839 | tatC | -0.7 | -3.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1693 | aroD | -0.7 | -3.5 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2501 | ppk | -0.7 | -5.4 | polyphosphate kinase (NCBI) | compare |
| b4375 | prfC | -0.7 | -1.8 | peptide chain release factor 3 (NCBI) | compare |
| b2343 | b2343 | -0.7 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2620 | smpB | -0.7 | -0.8 | SsrA-binding protein (NCBI) | compare |
| b0603 | ybdO | -0.7 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3229 | sspA | -0.7 | -1.7 | stringent starvation protein A (NCBI) | compare |
| b1712 | ihfA | -0.7 | -0.7 | integration host factor subunit alpha (NCBI) | compare |
| b0234 | yafP | -0.7 | -1.5 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0688 | pgm | -0.7 | -2.3 | phosphoglucomutase (NCBI) | compare |
| b4702 | mgtL | -0.7 | -1.9 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3706 | trmE | -0.7 | -2.4 | tRNA modification GTPase (NCBI) | compare |
| b3842 | rfaH | -0.7 | -3.0 | transcriptional activator RfaH (NCBI) | compare |
| b2642 | yfjW | -0.7 | -1.1 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2830 | nudH | -0.7 | -1.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1563 | relE | -0.7 | -1.4 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b2553 | glnB | -0.7 | -3.3 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3620 | rfaF | -0.6 | -3.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2820 | recB | -0.6 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b0740 | tolB | -0.6 | -1.8 | translocation protein TolB precursor (NCBI) | compare |
| b1130 | phoP | -0.6 | -1.0 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2894 | xerD | -0.6 | -0.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0222 | lpcA | -0.6 | -1.6 | phosphoheptose isomerase (NCBI) | compare |
| b1497 | b1497 | -0.6 | -0.4 | putative enzyme (VIMSS) | compare |
| b1001 | yccE | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b0237 | pepD | -0.6 | -4.7 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b3630 | rfaP | -0.6 | -4.8 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1514 | lsrC | -0.6 | -2.2 | AI2 transporter (NCBI) | compare |
| b2055 | wcaE | -0.6 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b3930 | menA | -0.6 | -5.2 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2083 | yegZ | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1167 | ymgC | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b2071 | yegJ | -0.6 | -1.7 | hypothetical protein (NCBI) | compare |
| b1235 | rssB | -0.6 | -4.1 | response regulator of RpoS (NCBI) | compare |
| b2683 | ygaH | -0.6 | -3.6 | predicted inner membrane protein (NCBI) | compare |
| b3405 | ompR | -0.6 | -2.6 | osmolarity response regulator (NCBI) | compare |
| b0500 | ybbD | -0.6 | -0.3 | hypothetical protein (RefSeq) | compare |
| b3115 | tdcD | -0.6 | -5.4 | propionate kinase/acetate kinase C, anaerobic (RefSeq) | compare |
| b1187 | fadR | -0.6 | -2.3 | fatty acid metabolism regulator (NCBI) | compare |
| b3390 | aroK | -0.6 | -1.3 | shikimate kinase I (NCBI) | compare |
| b0303 | ykgI | -0.6 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b2258 | b2258 | -0.6 | -1.2 | putative transport/receptor protein (VIMSS) | compare |
| b0279 | yagM | -0.6 | -0.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0439 | lon | -0.6 | -2.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2528 | iscA | -0.6 | -1.3 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1865 | nudB | -0.6 | -1.1 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3387 | dam | -0.6 | -4.6 | DNA adenine methylase (NCBI) | compare |
| b2081 | yegQ | -0.6 | -4.0 | predicted peptidase (NCBI) | compare |
| b2569 | lepA | -0.6 | -2.5 | GTP-binding protein LepA (NCBI) | compare |
| b0948 | ycbY | -0.6 | -3.3 | predicted methyltransferase (NCBI) | compare |
| b4066 | yjcF | -0.6 | -0.5 | hypothetical protein (NCBI) | compare |
| b1942 | fliJ | -0.6 | -1.5 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1505 | ydeT | -0.5 | -1.0 | hypothetical protein (RefSeq) | compare |
| b1819 | manZ | -0.5 | -2.1 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b2114 | metG | -0.5 | -2.1 | methionyl-tRNA synthetase (NCBI) | compare |
| b4179 | vacB | -0.5 | -3.6 | putative enzyme (VIMSS) | compare |
| b1257 | yciE | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1576 | ydfD | -0.5 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1499 | ydeO | -0.5 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b4131 | cadA | -0.5 | -4.9 | lysine decarboxylase 1 (NCBI) | compare |
| b1593 | b1593 | -0.5 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0438 | clpX | -0.5 | -3.0 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0437 | clpP | -0.5 | -2.8 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4570 | lomR | -0.5 | -1.8 | no description | compare |
| b1855 | lpxM | -0.5 | -2.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0728 | sucC | -0.5 | -3.0 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0989 | cspH | -0.5 | -1.5 | stress protein, member of the CspA-family (NCBI) | compare |
| b3075 | ebgR | -0.5 | -2.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4453 | ldrD | -0.5 | -2.3 | toxic polypeptide, small (NCBI) | compare |
| b4451 | ryhB | -0.5 | -0.8 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b1804 | rnd | -0.5 | -2.9 | ribonuclease D (NCBI) | compare |
| b0881 | clpS | -0.5 | -1.5 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b4201 | priB | -0.5 | -1.7 | primosomal replication protein N (NCBI) | compare |
| b2562 | yfhL | -0.5 | -3.6 | predicted 4Fe-4S cluster-containing protein (NCBI) | compare |
| b2450 | yffS | -0.5 | -1.6 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b0705 | ybfL | -0.5 | -0.3 | putative receptor protein (VIMSS) | compare |
| b0232 | yafN | -0.5 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1630 | rsxD | -0.5 | -2.9 | electron transport complex protein RnfD (NCBI) | compare |
| b0080 | fruR | -0.5 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2299 | yfcD | -0.5 | -2.8 | predicted NUDIX hydrolase (NCBI) | compare |
| b4132 | cadB | -0.5 | -4.3 | predicted lysine/cadaverine transporter (NCBI) | compare |
| b4695 | ykgT | -0.5 | -2.1 | no description | compare |
| b4503 | yafF | -0.5 | -0.7 | no description | compare |
| b3158 | yhbU | -0.5 | -3.9 | predicted peptidase (collagenase-like) (NCBI) | compare |
| b2393 | nupC | -0.5 | -3.6 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b1088 | yceD | -0.5 | -2.2 | hypothetical protein (NCBI) | compare |
| b3742 | mioC | -0.5 | -3.4 | flavodoxin (NCBI) | compare |
| b1241 | adhE | -0.5 | -4.0 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b3609 | secB | -0.5 | -2.4 | export protein SecB (NCBI) | compare |
| b4163 | glyV | -0.5 | -1.2 | tRNA-Gly (NCBI) | compare |
| b3500 | gor | -0.5 | -1.1 | glutathione reductase (NCBI) | compare |
| b0082 | mraW | -0.5 | -1.7 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4048 | yjbM | -0.5 | -0.9 | hypothetical protein (NCBI) | compare |
| b2418 | pdxK | -0.5 | -2.5 | pyridoxine kinase (NCBI) | compare |
| b1874 | cutC | -0.5 | -1.7 | copper homeostasis protein (NCBI) | compare |
| b0263 | afuB | -0.5 | -2.3 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b4577 | sgrS | -0.5 | -1.7 | small antisense RNA (NCBI) | compare |
| b1677 | lpp | -0.5 | -1.0 | murein lipoprotein (NCBI) | compare |
| b3238 | yhcN | -0.4 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1777 | b1777 | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1025 | ycdT | -0.4 | -1.1 | predicted diguanylate cyclase (NCBI) | compare |
| b3183 | obgE | -0.4 | -0.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2017 | yefM | -0.4 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1523 | yneG | -0.4 | -1.4 | hypothetical protein (NCBI) | compare |
| b4595 | yciY | -0.4 | -1.7 | hypothetical protein (RefSeq) | compare |
| b3806 | cyaA | -0.4 | -2.4 | adenylate cyclase (NCBI) | compare |
| b2318 | truA | -0.4 | -1.1 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3636 | rpmG | -0.4 | -1.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b0658 | ybeX | -0.4 | -0.4 | predicteed ion transport (NCBI) | compare |
| b1627 | rsxA | -0.4 | -1.9 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b2625 | yfjI | -0.4 | -1.0 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1259 | yciG | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3761 | trpT | -0.4 | -1.1 | tRNA-Trp (NCBI) | compare |
| b3204 | ptsN | -0.4 | -2.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3164 | pnp | -0.4 | -1.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4171 | miaA | -0.4 | -1.6 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1853 | yebK | -0.4 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1217 | chaB | -0.4 | -1.1 | cation transport regulator (NCBI) | compare |
| b2822 | recC | -0.4 | -2.5 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4178 | yjeB | -0.4 | -2.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2007 | yeeX | -0.4 | -1.9 | conserved protein (RefSeq) | compare |
| b1814 | sdaA | -0.4 | -1.9 | L-serine deaminase I (NCBI) | compare |
| b1690 | ydiM | -0.4 | -1.3 | predicted transporter (NCBI) | compare |
| b1058 | yceO | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b1108 | ycfP | -0.4 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2814 | metZ | -0.4 | -1.0 | tRNA-Met (NCBI) | compare |
| b0167 | glnD | -0.4 | -1.7 | PII uridylyl-transferase (NCBI) | compare |
| b4443 | gcvB | -0.4 | -0.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b1659 | ydhB | -0.4 | -1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0149 | mrcB | -0.4 | -3.5 | penicillin-binding protein 1b (NCBI) | compare |
| b2947 | gshB | -0.4 | -2.3 | glutathione synthetase (NCBI) | compare |
| b1317 | ycjU | -0.4 | -1.5 | predicted beta-phosphoglucomutase (NCBI) | compare |