| | gene | name | fitness | t score | description | |
|---|
| b1185 | dsbB | +1.2 | 5.2 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b2934 | cmtB | +1.1 | 1.0 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1332 | ynaJ | +1.1 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b4538 | yoeF | +1.0 | 3.2 | hypothetical protein (RefSeq) | compare |
| b3860 | dsbA | +0.8 | 7.4 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b2156 | lysP | +0.8 | 7.1 | lysine transporter (NCBI) | compare |
| b0730 | mngR | +0.8 | 1.6 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4603 | rseX | +0.8 | 1.0 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1954 | dsrA | +0.7 | 3.5 | regulatory antisense RNA (NCBI) | compare |
| b1830 | prc | +0.7 | 4.9 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2859 | ygeO | +0.7 | 2.3 | hypothetical protein (RefSeq) | compare |
| b1058 | yceO | +0.7 | 0.3 | hypothetical protein (NCBI) | compare |
| b2051 | wcaH | +0.7 | 1.6 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b1831 | proQ | +0.7 | 2.2 | putative solute/DNA competence effector (NCBI) | compare |
| b4480 | hdfR | +0.7 | 4.6 | transcriptional regulator HdfR (NCBI) | compare |
| b1573 | ydfC | +0.6 | 1.3 | Qin prophage; predicted protein (RefSeq) | compare |
| b4676 | yoaK | +0.6 | 0.6 | expressed protein (RefSeq) | compare |
| b4481 | rffT | +0.6 | 4.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1195 | ymgE | +0.6 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b1183 | umuD | +0.6 | 1.8 | DNA polymerase V, subunit D (NCBI) | compare |
| b0630 | lipB | +0.6 | 1.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1739 | osmE | +0.6 | 2.7 | DNA-binding transcriptional activator (NCBI) | compare |
| b3790 | rffC | +0.6 | 3.9 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1357 | ydaS | +0.6 | 1.5 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1686 | ydiI | +0.6 | 1.5 | hypothetical protein (NCBI) | compare |
| b0542 | renD | +0.5 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3396 | mrcA | +0.5 | 5.2 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b4596 | yciZ | +0.5 | 0.9 | hypothetical protein (RefSeq) | compare |
| b1709 | btuD | +0.5 | 1.0 | vitamin B12-transporter ATPase (NCBI) | compare |
| b3786 | rffE | +0.5 | 4.6 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3764 | yifE | +0.5 | 2.9 | hypothetical protein (NCBI) | compare |
| b1742 | b1742 | +0.5 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1348 | lar | +0.5 | 1.6 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3794 | rffM | +0.5 | 3.8 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3784 | rfe | +0.5 | 4.4 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3961 | oxyR | +0.5 | 4.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3787 | rffD | +0.5 | 4.1 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4000 | hupA | +0.5 | 2.9 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1251 | yciI | +0.5 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3163 | nlpI | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b4698 | mgrR | +0.4 | 2.6 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b4042 | dgkA | +0.4 | 0.3 | diacylglycerol kinase (NCBI) | compare |
| b0802 | ybiJ | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b4152 | frdC | +0.4 | 2.5 | fumarate reductase subunit C (NCBI) | compare |
| b2208 | napF | +0.4 | 2.4 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) | compare |
| b1930 | yedF | +0.4 | 3.2 | hypothetical protein (NCBI) | compare |
| b2209 | eco | +0.4 | 0.9 | ecotin precursor (NCBI) | compare |
| b4218 | ytfL | +0.4 | 3.5 | predicted inner membrane protein (NCBI) | compare |
| b3791 | rffA | +0.4 | 3.4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2741 | rpoS | +0.4 | 2.8 | RNA polymerase sigma factor (NCBI) | compare |
| b1233 | ychJ | +0.4 | 2.9 | hypothetical protein (NCBI) | compare |
| b4651 | yibW | +0.4 | 0.3 | no description | compare |
| b1764 | selD | +0.4 | 2.3 | selenophosphate synthetase (NCBI) | compare |
| b3623 | rfaK | +0.4 | 1.4 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1765 | ydjA | +0.4 | 0.6 | predicted oxidoreductase (NCBI) | compare |
| b2572 | rseA | +0.4 | 2.4 | anti-sigma factor (NCBI) | compare |
| b4543 | ypaA | +0.4 | 2.4 | predicted protein (NCBI) | compare |
| b4376 | osmY | +0.4 | 1.9 | periplasmic protein (NCBI) | compare |
| b1520 | b1520 | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1724 | ydiZ | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b4551 | yheV | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b4631 | ykgQ | +0.4 | 1.4 | no description | compare |
| b1548 | nohA | +0.4 | 1.0 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b4704 | arrS | +0.4 | 0.2 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b2004 | yeeU | +0.4 | 2.3 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b3147 | yraM | +0.4 | 3.3 | hypothetical protein (NCBI) | compare |
| b2699 | recA | +0.4 | 0.5 | recombinase A (NCBI) | compare |
| b1919 | yedO | +0.4 | 1.1 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b4157 | yjeN | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b4642 | yoeD | +0.4 | 1.2 | no description | compare |
| b0101 | yacG | +0.4 | 2.0 | zinc-binding protein (NCBI) | compare |
| b1305 | pspB | +0.4 | 1.7 | phage shock protein B (NCBI) | compare |
| b3181 | greA | +0.4 | 2.4 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3027 | ygiZ | +0.3 | 0.2 | conserved inner membrane protein (NCBI) | compare |
| b4609 | ryfD | +0.3 | 2.0 | Novel sRNA, function unknown (RefSeq) | compare |
| b2481 | hyfA | +0.3 | 2.4 | hydrogenase 4 Fe-S subunit (VIMSS) | compare |
| b3483 | yhhH | +0.3 | 0.1 | orf, hypothetical protein (VIMSS) | compare |
| b1792 | yeaO | +0.3 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1656 | sodB | +0.3 | 1.2 | superoxide dismutase, Fe (NCBI) | compare |
| b1152 | ymfP | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4460 | araH | +0.3 | 1.6 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1625 | ydgT | +0.3 | 2.1 | predicted regulator (NCBI) | compare |
| b0191 | yaeJ | +0.3 | 2.4 | hypothetical protein (NCBI) | compare |
| b4533 | ynfO | +0.3 | 1.2 | Qin prophage; predicted protein (NCBI) | compare |
| b1227 | narI | +0.3 | 1.9 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit (NCBI) | compare |
| b1506 | yneL | +0.3 | 0.5 | predicted transcriptional regulator (NCBI) | compare |
| b4458 | oxyS | +0.3 | 0.5 | global regulatory RNA (NCBI) | compare |
| b2792 | yqcC | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b1462 | b1462 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0183 | rnhB | +0.3 | 1.8 | ribonuclease HII (NCBI) | compare |
| b4614 | sokA | +0.3 | 1.3 | no description | compare |
| b3446 | yrhB | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b2279 | nuoK | +0.3 | 0.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4571 | wbbL | +0.3 | 0.9 | no description | compare |
| b0209 | yafD | +0.3 | 2.3 | hypothetical protein (NCBI) | compare |
| b3979 | thrT | +0.3 | 0.1 | tRNA-Thr (NCBI) | compare |
| b3911 | cpxA | +0.3 | 2.6 | two-component sensor protein (NCBI) | compare |
| b4415 | hokE | +0.3 | 1.3 | toxic polypeptide, small (NCBI) | compare |
| b2587 | kgtP | +0.3 | 2.1 | alpha-ketoglutarate transporter (NCBI) | compare |
| b4418 | sraB | +0.3 | 0.6 | unknown RNA (NCBI) | compare |
| b2095 | gatZ | +0.3 | 1.9 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | compare |
| b0178 | hlpA | +0.3 | 1.5 | periplasmic chaperone (NCBI) | compare |
| b1684 | sufA | +0.3 | 1.3 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b1503 | ydeR | +0.3 | 1.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b0713 | ybgL | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b1250 | kch | +0.3 | 2.0 | voltage-gated potassium channel (NCBI) | compare |
| b0798 | ybiA | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b0193 | yaeF | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1495 | yddB | +0.3 | 2.3 | predicted porin protein (NCBI) | compare |
| b1753 | ynjA | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b0849 | grxA | +0.3 | 1.2 | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) (NCBI) | compare |
| b1556 | b1556 | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4558 | yifL | +0.3 | 1.8 | predicted lipoprotein (NCBI) | compare |
| b4441 | glmY | +0.3 | 0.9 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b2997 | hybO | +0.3 | 2.1 | hydrogenase 2, small subunit (NCBI) | compare |
| b1511 | ydeV | +0.3 | 1.7 | putative kinase (VIMSS) | compare |
| b4573 | insZ | +0.3 | 1.4 | no description | compare |
| b0846 | ybjK | +0.3 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0323 | yahI | +0.3 | 1.7 | predicted carbamate kinase-like protein (NCBI) | compare |
| b3152 | yraR | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4585 | sroB | +0.3 | 0.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b2916 | argP | +0.3 | 1.9 | chromosome replication initiation inhibitor protein (NCBI) | compare |
| b1768 | ydjB | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3291 | mscL | +0.3 | 2.0 | large-conductance mechanosensitive channel (NCBI) | compare |
| b1777 | b1777 | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3613 | yibP | +0.3 | 0.8 | putative membrane protein (VIMSS) | compare |
| b4640 | yoeG | +0.3 | 1.0 | no description | compare |
| b2250 | b2250 | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2586 | yfiM | +0.3 | 1.3 | predicted protein (RefSeq) | compare |
| b4656 | yjhY | +0.3 | 1.3 | no description | compare |
| b2264 | menD | +0.3 | 2.1 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b1081 | flgJ | +0.3 | 1.9 | flagellar biosynthesis protein FlgJ (NCBI) | compare |
| b1287 | yciW | +0.3 | 1.4 | putative oxidoreductase (VIMSS) | compare |
| b1733 | chbG | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b2010 | dacD | +0.3 | 2.0 | penicillin binding protein 6b (VIMSS) | compare |
| b1948 | fliP | +0.3 | 1.6 | flagellar biosynthesis protein P (NCBI) | compare |
| b3236 | mdh | +0.3 | 2.0 | malate dehydrogenase (NCBI) | compare |
| b1977 | asnT | +0.3 | 1.2 | tRNA-Asn (NCBI) | compare |
| b3725 | pstB | +0.3 | 0.1 | phosphate transporter subunit (NCBI) | compare |
| b0933 | ssuB | +0.3 | 1.6 | alkanesulfonate transporter subunit (NCBI) | compare |
| b2535 | csiE | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0803 | ybiI | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b2544 | yphB | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b2014 | yeeF | +0.3 | 1.7 | putative amino acid/amine transport protein (VIMSS) | compare |
| b2165 | yeiN | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b3844 | fre | +0.3 | 1.6 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0714 | nei | +0.3 | 1.5 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b4505 | insX | +0.3 | 0.4 | predicted IS protein (RefSeq) | compare |
| b2193 | narP | +0.3 | 1.7 | DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) | compare |
| b3021 | ygiT | +0.2 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0226 | dinJ | +0.2 | 1.1 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1950 | fliR | +0.2 | 1.1 | flagellar biosynthesis protein R (NCBI) | compare |
| b0765 | modC | +0.2 | 1.7 | molybdate transporter subunit (NCBI) | compare |
| b3973 | birA | +0.2 | 0.9 | biotin--protein ligase (NCBI) | compare |
| b1789 | yeaL | +0.2 | 1.1 | conserved inner membrane protein (NCBI) | compare |
| b1847 | yebF | +0.2 | 0.5 | predicted protein (RefSeq) | compare |
| b0641 | rlpB | +0.2 | 1.1 | minor lipoprotein (NCBI) | compare |
| b4686 | yshB | +0.2 | 1.5 | expressed protein (RefSeq) | compare |
| b1758 | b1758 | +0.2 | 0.6 | putative cytochrome oxidase (VIMSS) | compare |
| b2096 | gatY | +0.2 | 1.8 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b3622 | rfaL | +0.2 | 1.3 | O-antigen ligase (NCBI) | compare |
| b1848 | yebG | +0.2 | 0.7 | conserved protein regulated by LexA (NCBI) | compare |
| b1151 | ymfO | +0.2 | 1.2 | e14 prophage; conserved protein (RefSeq) | compare |
| b3563 | yiaB | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2202 | napC | +0.2 | 1.4 | nitrate reductase, cytochrome c-type, periplasmic (NCBI) | compare |
| b1663 | mdtK | +0.2 | 1.8 | multidrug efflux protein NorM (NCBI) | compare |
| b0920 | ycbC | +0.2 | 1.6 | conserved inner membrane protein (NCBI) | compare |
| b2730 | hypE | +0.2 | 1.8 | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein (RefSeq) | compare |
| b3481 | nikR | +0.2 | 1.7 | nickel responsive regulator (NCBI) | compare |
| b2199 | ccmC | +0.2 | 1.7 | heme exporter subunit (NCBI) | compare |
| b0613 | citG | +0.2 | 1.7 | triphosphoribosyl-dephospho-CoA transferase (NCBI) | compare |
| b4001 | yjaH | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b1557 | cspB | +0.2 | 1.0 | Qin prophage; cold shock protein (NCBI) | compare |
| b2700 | ygaD | +0.2 | 1.4 | competence damage-inducible protein A (NCBI) | compare |
| b2074 | b2074 | +0.2 | 1.3 | putative membrane protein (VIMSS) | compare |
| b2301 | yfcF | +0.2 | 1.3 | predicted enzyme (NCBI) | compare |
| b0564 | appY | +0.2 | 0.5 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3074 | ygjH | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b2645 | yfjZ | +0.2 | 1.4 | CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b2200 | ccmB | +0.2 | 1.4 | heme exporter subunit (NCBI) | compare |
| b2900 | yqfB | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b1255 | yciC | +0.2 | 1.2 | hypothetical protein (NCBI) | compare |
| b1097 | yceG | +0.2 | 1.5 | predicted aminodeoxychorismate lyase (NCBI) | compare |
| b0207 | dkgB | +0.2 | 1.7 | 2,5-diketo-D-gluconate reductase B (NCBI) | compare |
| b2486 | hyfF | +0.2 | 1.6 | NADH dehydrogenase subunit N (NCBI) | compare |
| b4312 | fimB | +0.2 | 1.9 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b0476 | aes | +0.2 | 1.7 | acetyl esterase (NCBI) | compare |
| b1225 | narH | +0.2 | 1.6 | nitrate reductase 1, beta (Fe-S) subunit (NCBI) | compare |
| b2426 | ucpA | +0.2 | 0.9 | putative oxidoreductase (VIMSS) | compare |
| b0427 | yajR | +0.2 | 2.0 | putative transport protein (VIMSS) | compare |
| b1342 | ydaN | +0.2 | 1.5 | zinc transporter (NCBI) | compare |
| b0447 | ybaO | +0.2 | 1.6 | putative LRP-like transcriptional regulator (VIMSS) | compare |
| b2809 | b2809 | +0.2 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1035 | ycdY | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b0393 | rdgC | +0.2 | 1.9 | recombination associated protein (NCBI) | compare |
| b0192 | nlpE | +0.2 | 1.7 | lipoprotein involved with copper homeostasis and adhesion (NCBI) | compare |
| b1823 | cspC | +0.2 | 0.9 | stress protein, member of the CspA-family (NCBI) | compare |
| b1248 | b1248 | +0.2 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1976 | b1976 | +0.2 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1461 | ydcE | +0.2 | 1.1 | 4-oxalocrotonate tautomerase (NCBI) | compare |