| | gene | name | fitness | t score | description | |
|---|
| b3979 | thrT | +1.5 | 0.5 | tRNA-Thr (NCBI) | compare |
| b2934 | cmtB | +1.1 | 1.0 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1185 | dsbB | +1.1 | 6.8 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b3860 | dsbA | +1.0 | 8.5 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0630 | lipB | +0.9 | 1.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b4596 | yciZ | +0.8 | 1.6 | hypothetical protein (RefSeq) | compare |
| b1709 | btuD | +0.8 | 1.7 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1765 | ydjA | +0.8 | 1.3 | predicted oxidoreductase (NCBI) | compare |
| b1476 | fdnI | +0.7 | 1.3 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0798 | ybiA | +0.7 | 2.4 | hypothetical protein (NCBI) | compare |
| b0998 | torD | +0.7 | 1.7 | chaperone protein TorD (NCBI) | compare |
| b1831 | proQ | +0.7 | 2.7 | putative solute/DNA competence effector (NCBI) | compare |
| b2156 | lysP | +0.7 | 6.3 | lysine transporter (NCBI) | compare |
| b0730 | mngR | +0.7 | 1.5 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4603 | rseX | +0.7 | 0.9 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b4538 | yoeF | +0.7 | 1.9 | hypothetical protein (RefSeq) | compare |
| b3790 | rffC | +0.7 | 5.1 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3163 | nlpI | +0.7 | 4.1 | hypothetical protein (NCBI) | compare |
| b3791 | rffA | +0.6 | 5.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1160 | elbA | +0.6 | 1.1 | hypothetical protein (NCBI) | compare |
| b1954 | dsrA | +0.6 | 2.6 | regulatory antisense RNA (NCBI) | compare |
| b1085 | b1085 | +0.6 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3794 | rffM | +0.6 | 4.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1830 | prc | +0.6 | 3.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1195 | ymgE | +0.6 | 1.8 | predicted inner membrane protein (NCBI) | compare |
| b4481 | rffT | +0.6 | 4.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0114 | aceE | +0.5 | 1.2 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b3786 | rffE | +0.5 | 4.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3787 | rffD | +0.5 | 4.6 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4480 | hdfR | +0.5 | 3.6 | transcriptional regulator HdfR (NCBI) | compare |
| b3396 | mrcA | +0.5 | 5.0 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b3784 | rfe | +0.5 | 4.7 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1573 | ydfC | +0.5 | 0.7 | Qin prophage; predicted protein (RefSeq) | compare |
| b0542 | renD | +0.5 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1305 | pspB | +0.5 | 2.1 | phage shock protein B (NCBI) | compare |
| b1348 | lar | +0.5 | 1.2 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b2587 | kgtP | +0.5 | 2.9 | alpha-ketoglutarate transporter (NCBI) | compare |
| b3147 | yraM | +0.4 | 3.9 | hypothetical protein (NCBI) | compare |
| b4573 | insZ | +0.4 | 2.9 | no description | compare |
| b0843 | ybjH | +0.4 | 1.0 | hypothetical protein (NCBI) | compare |
| b1179 | ycgL | +0.4 | 2.2 | conserved protein (NCBI) | compare |
| b4000 | hupA | +0.4 | 2.4 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1261 | trpB | +0.4 | 2.4 | tryptophan synthase subunit beta (NCBI) | compare |
| b4551 | yheV | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b2741 | rpoS | +0.4 | 3.0 | RNA polymerase sigma factor (NCBI) | compare |
| b4676 | yoaK | +0.4 | 0.3 | expressed protein (RefSeq) | compare |
| b0933 | ssuB | +0.4 | 1.9 | alkanesulfonate transporter subunit (NCBI) | compare |
| b4609 | ryfD | +0.4 | 1.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b2208 | napF | +0.4 | 2.2 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) | compare |
| b0183 | rnhB | +0.4 | 2.7 | ribonuclease HII (NCBI) | compare |
| b2250 | b2250 | +0.4 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4369 | leuP | +0.4 | 1.5 | tRNA-Leu (NCBI) | compare |
| b2209 | eco | +0.4 | 1.1 | ecotin precursor (NCBI) | compare |
| b1233 | ychJ | +0.4 | 2.3 | hypothetical protein (NCBI) | compare |
| b1530 | marR | +0.4 | 1.8 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b4218 | ytfL | +0.4 | 2.9 | predicted inner membrane protein (NCBI) | compare |
| b4704 | arrS | +0.4 | 0.2 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b1790 | yeaM | +0.4 | 2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3961 | oxyR | +0.4 | 3.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4699 | fnrS | +0.4 | 0.6 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1951 | rcsA | +0.4 | 0.9 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b1524 | yneH | +0.4 | 0.7 | predicted glutaminase (NCBI) | compare |
| b2510 | b2510 | +0.4 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1644 | b1644 | +0.4 | 1.8 | putative membrane protein (VIMSS) | compare |
| b3021 | ygiT | +0.4 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1822 | rrmA | +0.4 | 1.5 | 23S rRNA m1G745 methyltransferase (NCBI) | compare |
| b2212 | alkB | +0.4 | 1.9 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) | compare |
| b0388 | aroL | +0.4 | 2.6 | shikimate kinase II (NCBI) | compare |
| b1823 | cspC | +0.4 | 1.3 | stress protein, member of the CspA-family (NCBI) | compare |
| b3483 | yhhH | +0.4 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b4157 | yjeN | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b0191 | yaeJ | +0.3 | 2.6 | hypothetical protein (NCBI) | compare |
| b1724 | ydiZ | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b0218 | yafU | +0.3 | 1.6 | predicted inner membrane protein (RefSeq) | compare |
| b1961 | dcm | +0.3 | 1.1 | DNA cytosine methylase (NCBI) | compare |
| b4045 | yjbJ | +0.3 | 1.5 | predicted stress response protein (NCBI) | compare |
| b1480 | sra | +0.3 | 1.1 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b2291 | yfbR | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b4360 | yjjA | +0.3 | 1.7 | putative glycoprotein/receptor (VIMSS) | compare |
| b1663 | mdtK | +0.3 | 2.3 | multidrug efflux protein NorM (NCBI) | compare |
| b1753 | ynjA | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b4460 | araH | +0.3 | 1.6 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b1726 | yniB | +0.3 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b0942 | ycbU | +0.3 | 2.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3027 | ygiZ | +0.3 | 0.2 | conserved inner membrane protein (NCBI) | compare |
| b3100 | yqjK | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1566 | flxA | +0.3 | 1.1 | Qin prophage; predicted protein (NCBI) | compare |
| b0683 | fur | +0.3 | 0.6 | ferric uptake regulator (NCBI) | compare |
| b4387 | ytjB | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b2264 | menD | +0.3 | 2.7 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b2916 | argP | +0.3 | 2.4 | chromosome replication initiation inhibitor protein (NCBI) | compare |
| b1768 | ydjB | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1792 | yeaO | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2853 | ygeI | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b4642 | yoeD | +0.3 | 1.2 | no description | compare |
| b1138 | ymfE | +0.3 | 0.8 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1332 | ynaJ | +0.3 | 0.3 | predicted inner membrane protein (NCBI) | compare |
| b2572 | rseA | +0.3 | 2.0 | anti-sigma factor (NCBI) | compare |
| b1930 | yedF | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b3911 | cpxA | +0.3 | 2.7 | two-component sensor protein (NCBI) | compare |
| b1506 | yneL | +0.3 | 0.7 | predicted transcriptional regulator (NCBI) | compare |
| b2051 | wcaH | +0.3 | 0.7 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b3973 | birA | +0.3 | 1.2 | biotin--protein ligase (NCBI) | compare |
| b2809 | b2809 | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0696 | kdpC | +0.3 | 1.0 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b4513 | kdpF | +0.3 | 0.5 | potassium ion accessory transporter subunit (NCBI) | compare |
| b1357 | ydaS | +0.3 | 1.1 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1344 | ydaO | +0.3 | 1.2 | predicted C32 tRNA thiolase (NCBI) | compare |
| b1919 | yedO | +0.3 | 1.1 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b4686 | yshB | +0.3 | 1.8 | expressed protein (RefSeq) | compare |
| b4411 | ecnB | +0.3 | 1.8 | entericidin B membrane lipoprotein (NCBI) | compare |
| b1143 | ymfI | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4519 | icdC | +0.3 | 1.5 | no description | compare |
| b4614 | sokA | +0.3 | 1.3 | no description | compare |
| b2362 | yfdS | +0.3 | 1.1 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2433 | b2433 | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3555 | yiaG | +0.3 | 1.7 | predicted transcriptional regulator (NCBI) | compare |
| b3962 | udhA | +0.3 | 2.3 | putative oxidoreductase (VIMSS) | compare |
| b1252 | tonB | +0.3 | 1.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1949 | fliQ | +0.3 | 1.2 | flagellar biosynthesis protein Q (NCBI) | compare |
| b0802 | ybiJ | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b2096 | gatY | +0.3 | 1.8 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b2778 | ygcG | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4618 | tisB | +0.3 | 1.7 | lexA-regulated toxic peptide (RefSeq) | compare |
| b1959 | yedA | +0.3 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b1408 | b1408 | +0.3 | 1.7 | probable enzyme (VIMSS) | compare |
| b1238 | tdk | +0.3 | 1.8 | thymidine kinase (NCBI) | compare |
| b1113 | ycfS | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b1299 | puuR | +0.3 | 1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0852 | rimK | +0.3 | 1.9 | ribosomal protein S6 modification protein (NCBI) | compare |
| b2500 | purN | +0.3 | 2.0 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b2782 | chpA | +0.3 | 1.8 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b3481 | nikR | +0.3 | 2.0 | nickel responsive regulator (NCBI) | compare |
| b4381 | deoC | +0.3 | 1.8 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b1114 | mfd | +0.3 | 2.0 | transcription-repair coupling factor (NCBI) | compare |
| b2014 | yeeF | +0.3 | 2.0 | putative amino acid/amine transport protein (VIMSS) | compare |
| b2486 | hyfF | +0.3 | 1.8 | NADH dehydrogenase subunit N (NCBI) | compare |
| b2261 | menC | +0.3 | 1.9 | O-succinylbenzoate synthase (NCBI) | compare |
| b2071 | yegJ | +0.3 | 0.9 | hypothetical protein (NCBI) | compare |
| b1904 | yecR | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b2195 | ccmG | +0.3 | 1.0 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b0571 | cusR | +0.3 | 2.0 | DNA-binding response regulator in two-component regulatory system with CusS (NCBI) | compare |
| b1249 | cls | +0.3 | 1.7 | cardiolipin synthetase (NCBI) | compare |
| b3443 | yrhA | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0521 | ybcF | +0.3 | 1.5 | predicted carbamate kinase (NCBI) | compare |
| b1739 | osmE | +0.3 | 0.8 | DNA-binding transcriptional activator (NCBI) | compare |
| b4522 | yciX_1 | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b3006 | exbB | +0.3 | 2.1 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2103 | thiD | +0.2 | 2.1 | phosphomethylpyrimidine kinase (NCBI) | compare |
| b4363 | yjjB | +0.2 | 1.5 | conserved inner membrane protein (RefSeq) | compare |
| b3250 | mreC | +0.2 | 0.8 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b4234 | yjgA | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b0645 | ybeR | +0.2 | 1.9 | hypothetical protein (NCBI) | compare |
| b2266 | elaB | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b1611 | fumC | +0.2 | 1.6 | fumarate hydratase (NCBI) | compare |
| b1874 | cutC | +0.2 | 0.8 | copper homeostasis protein (NCBI) | compare |
| b3775 | ppiC | +0.2 | 1.4 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b3099 | yqjE | +0.2 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b1656 | sodB | +0.2 | 0.8 | superoxide dismutase, Fe (NCBI) | compare |
| b1698 | ydiR | +0.2 | 1.5 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b4646 | yrdE | +0.2 | 1.1 | no description | compare |
| b1686 | ydiI | +0.2 | 0.7 | hypothetical protein (NCBI) | compare |
| b4388 | serB | +0.2 | 1.8 | 3-phosphoserine phosphatase (NCBI) | compare |
| b4017 | arpA | +0.2 | 1.4 | regulator of acetyl CoA synthetase (NCBI) | compare |
| b0946 | ycbW | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2481 | hyfA | +0.2 | 1.4 | hydrogenase 4 Fe-S subunit (VIMSS) | compare |
| b2217 | rcsB | +0.2 | 1.9 | DNA-binding response regulator in two-component regulatory system with RcsC and YojN (NCBI) | compare |
| b3476 | nikA | +0.2 | 2.0 | nickel transporter subunit (NCBI) | compare |
| b3725 | pstB | +0.2 | 0.1 | phosphate transporter subunit (NCBI) | compare |
| b0208 | yafC | +0.2 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1339 | abgR | +0.2 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1058 | yceO | +0.2 | 0.1 | hypothetical protein (NCBI) | compare |
| b3764 | yifE | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b2199 | ccmC | +0.2 | 1.4 | heme exporter subunit (NCBI) | compare |
| b0393 | rdgC | +0.2 | 2.0 | recombination associated protein (NCBI) | compare |
| b1907 | tyrP | +0.2 | 1.1 | tyrosine transporter (NCBI) | compare |
| b3362 | yhfG | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b3478 | nikC | +0.2 | 2.1 | nickel transporter subunit (NCBI) | compare |
| b3236 | mdh | +0.2 | 1.7 | malate dehydrogenase (NCBI) | compare |
| b0209 | yafD | +0.2 | 1.9 | hypothetical protein (NCBI) | compare |
| b4377 | yjjU | +0.2 | 1.9 | predicted esterase (NCBI) | compare |
| b0996 | torC | +0.2 | 1.7 | trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit (NCBI) | compare |
| b1205 | ychH | +0.2 | 0.8 | predicted inner membrane protein (NCBI) | compare |
| b1553 | ydfP | +0.2 | 0.5 | Qin prophage; conserved protein (NCBI) | compare |
| b2399 | yfeD | +0.2 | 1.4 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1035 | ycdY | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b2997 | hybO | +0.2 | 1.8 | hydrogenase 2, small subunit (NCBI) | compare |
| b4541 | yehK | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b0193 | yaeF | +0.2 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2294 | b2294 | +0.2 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0836 | yliH | +0.2 | 1.0 | hypothetical protein (NCBI) | compare |
| b1045 | ymdB | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b0447 | ybaO | +0.2 | 1.7 | putative LRP-like transcriptional regulator (VIMSS) | compare |
| b3752 | rbsK | +0.2 | 1.9 | ribokinase (NCBI) | compare |
| b1729 | ydjN | +0.2 | 1.2 | predicted transporter (NCBI) | compare |
| b1260 | trpA | +0.2 | 1.7 | tryptophan synthase subunit alpha (NCBI) | compare |
| b2292 | yfbS | +0.2 | 1.8 | predicted transporter (NCBI) | compare |
| b3672 | ivbL | +0.2 | 1.2 | ilvB operon leader peptide (NCBI) | compare |
| b1335 | ogt | +0.2 | 1.2 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b0226 | dinJ | +0.2 | 0.7 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |