| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -6.4 | -16.6 | alanine racemase (NCBI) | compare |
| b4238 | nrdD | -4.9 | -12.4 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4237 | nrdG | -4.8 | -8.6 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4041 | plsB | -4.4 | -5.1 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4025 | pgi | -3.1 | -14.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1334 | fnr | -2.9 | -3.3 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b1850 | eda | -2.0 | -4.5 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0386 | proC | -1.9 | -6.3 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0949 | uup | -1.8 | -11.6 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0243 | proA | -1.7 | -11.0 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b2330 | yfcB | -1.7 | -1.5 | putative adenine-specific methylase (VIMSS) | compare |
| b0739 | tolA | -1.7 | -3.5 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0741 | pal | -1.6 | -4.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2830 | nudH | -1.6 | -2.0 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2168 | fruK | -1.6 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b0688 | pgm | -1.5 | -4.6 | phosphoglucomutase (NCBI) | compare |
| b0902 | pflA | -1.4 | -7.8 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b4552 | yrhC | -1.4 | -1.6 | no description | compare |
| b1361 | ydaW | -1.4 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0908 | aroA | -1.4 | -9.4 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b1125 | potB | -1.4 | -6.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3781 | trxA | -1.3 | -6.7 | thioredoxin 1 (VIMSS) | compare |
| b0737 | tolQ | -1.3 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1123 | potD | -1.3 | -7.1 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b2528 | iscA | -1.3 | -3.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4202 | rpsR | -1.3 | -2.4 | 30S ribosomal protein S18 (NCBI) | compare |
| b3389 | aroB | -1.3 | -10.4 | 3-dehydroquinate synthase (NCBI) | compare |
| b2620 | smpB | -1.3 | -1.7 | SsrA-binding protein (NCBI) | compare |
| b1236 | galU | -1.3 | -5.2 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1049 | mdoH | -1.3 | -9.7 | glucosyltransferase MdoH (NCBI) | compare |
| b0242 | proB | -1.2 | -6.4 | gamma-glutamyl kinase (NCBI) | compare |
| b1124 | potC | -1.2 | -5.8 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1292 | sapC | -1.2 | -3.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4402 | yjjY | -1.2 | -1.2 | hypothetical protein (NCBI) | compare |
| b2329 | aroC | -1.2 | -6.0 | chorismate synthase (NCBI) | compare |
| b3281 | aroE | -1.1 | -10.1 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b1860 | ruvB | -1.1 | -1.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b1048 | mdoG | -1.1 | -6.6 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b2297 | pta | -1.1 | -0.7 | phosphate acetyltransferase (NCBI) | compare |
| b3390 | aroK | -1.1 | -2.4 | shikimate kinase I (NCBI) | compare |
| b3162 | deaD | -1.1 | -5.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0200 | gmhB | -1.1 | -1.5 | hypothetical protein (NCBI) | compare |
| b3868 | glnG | -1.1 | -6.8 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1126 | potA | -1.1 | -4.5 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1551 | b1551 | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0903 | pflB | -1.0 | -7.7 | pyruvate formate lyase I (NCBI) | compare |
| b3842 | rfaH | -1.0 | -6.0 | transcriptional activator RfaH (NCBI) | compare |
| b2912 | ygfA | -1.0 | -2.7 | putative ligase (VIMSS) | compare |
| b1291 | sapD | -0.9 | -1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3493 | pitA | -0.9 | -6.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b2318 | truA | -0.9 | -2.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1693 | aroD | -0.9 | -4.0 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b3052 | rfaE | -0.8 | -4.2 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3405 | ompR | -0.8 | -3.7 | osmolarity response regulator (NCBI) | compare |
| b3183 | obgE | -0.8 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3619 | rfaD | -0.8 | -3.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3035 | tolC | -0.8 | -3.6 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1677 | lpp | -0.8 | -2.4 | murein lipoprotein (NCBI) | compare |
| b0728 | sucC | -0.8 | -5.2 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2846 | yqeH | -0.8 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0990 | cspG | -0.8 | -1.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4414 | tff | -0.8 | -2.6 | unknown RNA (NCBI) | compare |
| b0167 | glnD | -0.8 | -4.2 | PII uridylyl-transferase (NCBI) | compare |
| b3631 | rfaG | -0.8 | -7.2 | glucosyltransferase I (NCBI) | compare |
| b2894 | xerD | -0.8 | -0.7 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b0237 | pepD | -0.8 | -5.6 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b0729 | sucD | -0.8 | -4.3 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b2501 | ppk | -0.8 | -5.9 | polyphosphate kinase (NCBI) | compare |
| b1863 | ruvC | -0.8 | -1.3 | Holliday junction resolvase (NCBI) | compare |
| b4375 | prfC | -0.8 | -2.3 | peptide chain release factor 3 (NCBI) | compare |
| b0912 | ihfB | -0.8 | -1.6 | integration host factor subunit beta (NCBI) | compare |
| b4593 | ymgI | -0.8 | -0.9 | hypothetical protein (RefSeq) | compare |
| b0438 | clpX | -0.7 | -4.4 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0222 | lpcA | -0.7 | -2.3 | phosphoheptose isomerase (NCBI) | compare |
| b0053 | surA | -0.7 | -4.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0232 | yafN | -0.7 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2659 | b2659 | -0.7 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b0303 | ykgI | -0.7 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0603 | ybdO | -0.7 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1882 | cheY | -0.7 | -0.6 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b3806 | cyaA | -0.7 | -3.9 | adenylate cyclase (NCBI) | compare |
| b2820 | recB | -0.7 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3159 | yhbV | -0.7 | -6.2 | orf, hypothetical protein (VIMSS) | compare |
| b0740 | tolB | -0.7 | -2.1 | translocation protein TolB precursor (NCBI) | compare |
| b0560 | nohB | -0.7 | -3.3 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b0234 | yafP | -0.7 | -1.7 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4462 | ygaQ | -0.7 | -1.8 | hypothetical protein (RefSeq) | compare |
| b0014 | dnaK | -0.7 | -2.7 | molecular chaperone DnaK (NCBI) | compare |
| b4179 | vacB | -0.7 | -4.6 | putative enzyme (VIMSS) | compare |
| b4535 | yniD | -0.7 | -1.3 | predicted protein (RefSeq) | compare |
| b3204 | ptsN | -0.7 | -3.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3728 | pstS | -0.7 | -3.0 | phosphate transporter subunit (NCBI) | compare |
| b0738 | tolR | -0.6 | -1.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2369 | evgA | -0.6 | -3.1 | DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) | compare |
| b2652 | ileY | -0.6 | -0.8 | tRNA-Ile (NCBI) | compare |
| b3630 | rfaP | -0.6 | -5.2 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1712 | ihfA | -0.6 | -0.7 | integration host factor subunit alpha (NCBI) | compare |
| b1235 | rssB | -0.6 | -4.8 | response regulator of RpoS (NCBI) | compare |
| b3158 | yhbU | -0.6 | -4.8 | predicted peptidase (collagenase-like) (NCBI) | compare |
| b2081 | yegQ | -0.6 | -4.9 | predicted peptidase (NCBI) | compare |
| b1429 | tehA | -0.6 | -0.8 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0500 | ybbD | -0.6 | -0.3 | hypothetical protein (RefSeq) | compare |
| b3811 | xerC | -0.6 | -0.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2055 | wcaE | -0.6 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b2576 | srmB | -0.6 | -2.3 | ATP-dependent RNA helicase (NCBI) | compare |
| b1001 | yccE | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b4131 | cadA | -0.6 | -5.5 | lysine decarboxylase 1 (NCBI) | compare |
| b2567 | rnc | -0.6 | -0.3 | ribonuclease III (NCBI) | compare |
| b0145 | dksA | -0.6 | -1.5 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1497 | b1497 | -0.6 | -0.3 | putative enzyme (VIMSS) | compare |
| b2822 | recC | -0.6 | -3.5 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b4132 | cadB | -0.6 | -5.2 | predicted lysine/cadaverine transporter (NCBI) | compare |
| b0890 | ftsK | -0.6 | -2.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2450 | yffS | -0.6 | -1.4 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3930 | menA | -0.6 | -5.0 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2024 | hisA | -0.6 | -2.1 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b3620 | rfaF | -0.6 | -3.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1861 | ruvA | -0.5 | -0.7 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4685 | yrbN | -0.5 | -1.8 | expressed protein (RefSeq) | compare |
| b1165 | ymgA | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1171 | b1171 | -0.5 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1167 | ymgC | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b2625 | yfjI | -0.5 | -1.3 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1358 | ydaT | -0.5 | -1.4 | Rac prophage; predicted protein (NCBI) | compare |
| b3115 | tdcD | -0.5 | -5.0 | propionate kinase/acetate kinase C, anaerobic (RefSeq) | compare |
| b1865 | nudB | -0.5 | -1.1 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0051 | ksgA | -0.5 | -2.9 | dimethyladenosine transferase (NCBI) | compare |
| b4497 | yeeL | -0.5 | -0.9 | no description | compare |
| b3465 | yhhF | -0.5 | -3.7 | predicted methyltransferase (NCBI) | compare |
| b1257 | yciE | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b1804 | rnd | -0.5 | -3.0 | ribonuclease D (NCBI) | compare |
| b4702 | mgtL | -0.5 | -1.7 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3157 | yhbT | -0.5 | -2.2 | predicted lipid carrier protein (NCBI) | compare |
| b3210 | arcB | -0.5 | -3.1 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2814 | metZ | -0.5 | -1.3 | tRNA-Met (NCBI) | compare |
| b1576 | ydfD | -0.5 | -0.2 | Qin prophage; predicted protein (NCBI) | compare |
| b3229 | sspA | -0.5 | -1.4 | stringent starvation protein A (NCBI) | compare |
| b3761 | trpT | -0.5 | -1.4 | tRNA-Trp (NCBI) | compare |
| b2553 | glnB | -0.5 | -2.3 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0437 | clpP | -0.5 | -2.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0118 | acnB | -0.5 | -0.7 | aconitate hydratase (NCBI) | compare |
| b3636 | rpmG | -0.5 | -1.3 | 50S ribosomal protein L33 (NCBI) | compare |
| b3180 | yhbY | -0.5 | -2.7 | predicted RNA-binding protein (NCBI) | compare |
| b2285 | nuoE | -0.5 | -1.5 | NADH dehydrogenase subunit E (NCBI) | compare |
| b4048 | yjbM | -0.5 | -1.1 | hypothetical protein (NCBI) | compare |
| b1853 | yebK | -0.5 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2319 | usg | -0.5 | -2.4 | hypothetical protein (NCBI) | compare |
| b1129 | phoQ | -0.5 | -1.1 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1187 | fadR | -0.5 | -2.1 | fatty acid metabolism regulator (NCBI) | compare |
| b0279 | yagM | -0.5 | -0.4 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b1499 | ydeO | -0.5 | -0.2 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b0658 | ybeX | -0.5 | -0.5 | predicteed ion transport (NCBI) | compare |
| b4443 | gcvB | -0.5 | -0.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b4699 | fnrS | -0.5 | -0.6 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b0114 | aceE | -0.5 | -0.9 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2479 | gcvR | -0.5 | -2.8 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0082 | mraW | -0.5 | -2.3 | S-adenosyl-methyltransferase (NCBI) | compare |
| b2363 | yfdT | -0.5 | -1.9 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1147 | ymfL | -0.5 | -2.0 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0881 | clpS | -0.5 | -1.4 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b4191 | ulaR | -0.5 | -2.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2683 | ygaH | -0.5 | -2.6 | predicted inner membrane protein (NCBI) | compare |
| b1632 | rsxE | -0.5 | -2.9 | NADH-ubiquinone oxidoreductase (NCBI) | compare |
| b2847 | yqeI | -0.5 | -0.3 | predicted transcriptional regulator (NCBI) | compare |
| b0149 | mrcB | -0.4 | -3.8 | penicillin-binding protein 1b (NCBI) | compare |
| b2853 | ygeI | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b1685 | ydiH | -0.4 | -1.3 | predicted protein (RefSeq) | compare |
| b3387 | dam | -0.4 | -3.6 | DNA adenine methylase (NCBI) | compare |
| b4453 | ldrD | -0.4 | -1.8 | toxic polypeptide, small (NCBI) | compare |
| b1921 | fliZ | -0.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3609 | secB | -0.4 | -2.0 | export protein SecB (NCBI) | compare |
| b1278 | pgpB | -0.4 | -1.9 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b1593 | b1593 | -0.4 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3119 | tdcR | -0.4 | -2.1 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b0357 | yaiN | -0.4 | -0.9 | putative alpha helix chain (VIMSS) | compare |
| b3612 | gpmI | -0.4 | -3.9 | phosphoglyceromutase (NCBI) | compare |
| b2343 | b2343 | -0.4 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1778 | yeaA | -0.4 | -1.8 | methionine sulfoxide reductase B (NCBI) | compare |
| b1104 | ycfL | -0.4 | -1.1 | hypothetical protein (NCBI) | compare |
| b1150 | ymfR | -0.4 | -0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b2393 | nupC | -0.4 | -3.1 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b4426 | isrA | -0.4 | -2.0 | unknown RNA (NCBI) | compare |
| b4201 | priB | -0.4 | -1.3 | primosomal replication protein N (NCBI) | compare |
| b2562 | yfhL | -0.4 | -3.4 | predicted 4Fe-4S cluster-containing protein (NCBI) | compare |
| b2948 | yqgE | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2498 | upp | -0.4 | -1.3 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1253 | yciA | -0.4 | -2.5 | predicted hydrolase (NCBI) | compare |
| b2111 | yehD | -0.4 | -2.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3239 | yhcO | -0.4 | -2.2 | predicted barnase inhibitor (NCBI) | compare |
| b4133 | cadC | -0.4 | -3.7 | DNA-binding transcriptional activator (NCBI) | compare |
| b3247 | cafA | -0.4 | -3.5 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b1968 | yedV | -0.4 | -1.8 | predicted sensory kinase in two-component regulatory system with YedW (NCBI) | compare |
| b1594 | dgsA | -0.4 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2808 | gcvA | -0.4 | -1.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2299 | yfcD | -0.4 | -2.1 | predicted NUDIX hydrolase (NCBI) | compare |
| b4590 | ybfK | -0.4 | -0.6 | hypothetical protein (RefSeq) | compare |
| b2569 | lepA | -0.4 | -1.9 | GTP-binding protein LepA (NCBI) | compare |
| b1351 | racC | -0.4 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1630 | rsxD | -0.4 | -2.3 | electron transport complex protein RnfD (NCBI) | compare |
| b1690 | ydiM | -0.4 | -1.3 | predicted transporter (NCBI) | compare |