| | gene | name | fitness | t score | description | |
|---|
| b1185 | dsbB | +1.1 | 6.4 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0730 | mngR | +1.1 | 2.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3860 | dsbA | +1.0 | 9.1 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b1831 | proQ | +0.9 | 2.7 | putative solute/DNA competence effector (NCBI) | compare |
| b0630 | lipB | +0.8 | 1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2699 | recA | +0.8 | 1.2 | recombinase A (NCBI) | compare |
| b1954 | dsrA | +0.8 | 3.6 | regulatory antisense RNA (NCBI) | compare |
| b2934 | cmtB | +0.7 | 0.6 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b2156 | lysP | +0.7 | 6.4 | lysine transporter (NCBI) | compare |
| b4505 | insX | +0.6 | 1.3 | predicted IS protein (RefSeq) | compare |
| b4596 | yciZ | +0.6 | 1.6 | hypothetical protein (RefSeq) | compare |
| b4551 | yheV | +0.6 | 3.1 | hypothetical protein (NCBI) | compare |
| b1476 | fdnI | +0.6 | 1.0 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b0798 | ybiA | +0.6 | 2.6 | hypothetical protein (NCBI) | compare |
| b1357 | ydaS | +0.6 | 1.8 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4481 | rffT | +0.6 | 4.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2444 | yffM | +0.5 | 1.4 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1733 | chbG | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b4538 | yoeF | +0.5 | 1.4 | hypothetical protein (RefSeq) | compare |
| b0542 | renD | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1195 | ymgE | +0.5 | 2.3 | predicted inner membrane protein (NCBI) | compare |
| b3790 | rffC | +0.5 | 2.8 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b3787 | rffD | +0.5 | 4.4 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1739 | osmE | +0.5 | 2.1 | DNA-binding transcriptional activator (NCBI) | compare |
| b1573 | ydfC | +0.5 | 0.9 | Qin prophage; predicted protein (RefSeq) | compare |
| b3786 | rffE | +0.5 | 4.2 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1742 | b1742 | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3784 | rfe | +0.5 | 4.3 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3794 | rffM | +0.5 | 3.7 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3163 | nlpI | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b0933 | ssuB | +0.4 | 2.2 | alkanesulfonate transporter subunit (NCBI) | compare |
| b4480 | hdfR | +0.4 | 3.3 | transcriptional regulator HdfR (NCBI) | compare |
| b3791 | rffA | +0.4 | 3.5 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1038 | csgF | +0.4 | 1.4 | predicted transport protein (NCBI) | compare |
| b3764 | yifE | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b1753 | ynjA | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b3396 | mrcA | +0.4 | 4.0 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b3021 | ygiT | +0.4 | 1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4000 | hupA | +0.4 | 2.2 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1143 | ymfI | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0843 | ybjH | +0.4 | 1.0 | hypothetical protein (NCBI) | compare |
| b3624 | rfaZ | +0.4 | 1.4 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1765 | ydjA | +0.4 | 0.6 | predicted oxidoreductase (NCBI) | compare |
| b3147 | yraM | +0.4 | 3.4 | hypothetical protein (NCBI) | compare |
| b2741 | rpoS | +0.4 | 2.6 | RNA polymerase sigma factor (NCBI) | compare |
| b2432 | yfeY | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b2586 | yfiM | +0.4 | 1.7 | predicted protein (RefSeq) | compare |
| b4520 | ymgF | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b1961 | dcm | +0.4 | 0.9 | DNA cytosine methylase (NCBI) | compare |
| b4704 | arrS | +0.4 | 0.2 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b3206 | npr | +0.4 | 2.6 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b3181 | greA | +0.4 | 2.2 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2915 | yqfE | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b0819 | ybiS | +0.4 | 2.9 | hypothetical protein (NCBI) | compare |
| b4509 | ylcG | +0.4 | 0.9 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3483 | yhhH | +0.4 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b3027 | ygiZ | +0.4 | 0.2 | conserved inner membrane protein (NCBI) | compare |
| b4376 | osmY | +0.4 | 1.7 | periplasmic protein (NCBI) | compare |
| b3259 | prmA | +0.3 | 2.5 | ribosomal protein L11 methyltransferase (NCBI) | compare |
| b1238 | tdk | +0.3 | 2.1 | thymidine kinase (NCBI) | compare |
| b3979 | thrT | +0.3 | 0.1 | tRNA-Thr (NCBI) | compare |
| b4614 | sokA | +0.3 | 1.5 | no description | compare |
| b3863 | polA | +0.3 | 0.5 | DNA polymerase I (NCBI) | compare |
| b4573 | insZ | +0.3 | 1.5 | no description | compare |
| b1847 | yebF | +0.3 | 0.7 | predicted protein (RefSeq) | compare |
| b1948 | fliP | +0.3 | 1.8 | flagellar biosynthesis protein P (NCBI) | compare |
| b2212 | alkB | +0.3 | 1.7 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) | compare |
| b2010 | dacD | +0.3 | 2.4 | penicillin binding protein 6b (VIMSS) | compare |
| b1590 | ynfH | +0.3 | 1.8 | oxidoreductase, membrane subunit (NCBI) | compare |
| b2014 | yeeF | +0.3 | 2.3 | putative amino acid/amine transport protein (VIMSS) | compare |
| b1134 | ymfB | +0.3 | 1.5 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b4515 | ybgT | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b4613 | dinQ | +0.3 | 1.2 | Damage inducible, function unknown (RefSeq) | compare |
| b3961 | oxyR | +0.3 | 2.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2587 | kgtP | +0.3 | 2.1 | alpha-ketoglutarate transporter (NCBI) | compare |
| b1651 | gloA | +0.3 | 1.0 | glyoxalase I, Ni-dependent (NCBI) | compare |
| b1058 | yceO | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b3261 | fis | +0.3 | 0.5 | DNA-binding protein Fis (NCBI) | compare |
| b1515 | lsrD | +0.3 | 1.6 | AI2 transporter (NCBI) | compare |
| b2782 | chpA | +0.3 | 2.0 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b1138 | ymfE | +0.3 | 0.9 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1758 | b1758 | +0.3 | 0.8 | putative cytochrome oxidase (VIMSS) | compare |
| b1558 | cspF | +0.3 | 1.3 | Qin prophage; cold shock protein (NCBI) | compare |
| b0713 | ybgL | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b2202 | napC | +0.3 | 2.0 | nitrate reductase, cytochrome c-type, periplasmic (NCBI) | compare |
| b1035 | ycdY | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b0852 | rimK | +0.3 | 2.2 | ribosomal protein S6 modification protein (NCBI) | compare |
| b1348 | lar | +0.3 | 0.9 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4313 | fimE | +0.3 | 2.4 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b4394 | yjjX | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1063 | yceB | +0.3 | 1.7 | predicted lipoprotein (NCBI) | compare |
| b1418 | cybB | +0.3 | 1.8 | cytochrome b(561) (VIMSS) | compare |
| b1789 | yeaL | +0.3 | 1.0 | conserved inner membrane protein (NCBI) | compare |
| b4277 | yjgZ | +0.3 | 2.3 | KpLE2 phage-like element; predicted protein (NCBI) | compare |
| b4363 | yjjB | +0.3 | 1.5 | conserved inner membrane protein (RefSeq) | compare |
| b2209 | eco | +0.3 | 1.0 | ecotin precursor (NCBI) | compare |
| b0617 | citD | +0.3 | 1.0 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b1724 | ydiZ | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b4646 | yrdE | +0.3 | 1.0 | no description | compare |
| b1478 | adhP | +0.3 | 1.5 | alcohol dehydrogenase (VIMSS) | compare |
| b2792 | yqcC | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1919 | yedO | +0.3 | 0.9 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b0696 | kdpC | +0.3 | 1.6 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b4158 | yjeO | +0.3 | 1.9 | conserved inner membrane protein (NCBI) | compare |
| b1096 | pabC | +0.3 | 2.0 | 4-amino-4-deoxychorismate lyase (NCBI) | compare |
| b0183 | rnhB | +0.3 | 1.7 | ribonuclease HII (NCBI) | compare |
| b2565 | recO | +0.3 | 1.6 | DNA repair protein RecO (NCBI) | compare |
| b0381 | ddlA | +0.3 | 1.9 | D-alanylalanine synthetase (NCBI) | compare |
| b3686 | ibpB | +0.3 | 2.1 | heat shock chaperone (NCBI) | compare |
| b4656 | yjhY | +0.3 | 1.5 | no description | compare |
| b2004 | yeeU | +0.3 | 1.5 | CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI) | compare |
| b4642 | yoeD | +0.3 | 1.0 | no description | compare |
| b1566 | flxA | +0.3 | 1.1 | Qin prophage; predicted protein (NCBI) | compare |
| b4609 | ryfD | +0.3 | 1.4 | Novel sRNA, function unknown (RefSeq) | compare |
| b1184 | umuC | +0.3 | 2.2 | DNA polymerase V subunit UmuC (NCBI) | compare |
| b1085 | b1085 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2535 | csiE | +0.3 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3250 | mreC | +0.3 | 0.8 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b2252 | ais | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b3236 | mdh | +0.3 | 2.2 | malate dehydrogenase (NCBI) | compare |
| b4331 | yjiI | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2486 | hyfF | +0.3 | 1.9 | NADH dehydrogenase subunit N (NCBI) | compare |
| b2250 | b2250 | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0388 | aroL | +0.3 | 1.7 | shikimate kinase II (NCBI) | compare |
| b2897 | ygfY | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b2488 | hyfH | +0.3 | 1.2 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b4698 | mgrR | +0.3 | 1.2 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b2736 | ygbJ | +0.3 | 1.4 | predicted dehydrogenase, with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |
| b2510 | b2510 | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0210 | yafE | +0.3 | 1.3 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2476 | purC | +0.3 | 0.8 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b3627 | rfaI | +0.3 | 2.2 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1276 | acnA | +0.3 | 1.8 | aconitate hydratase (NCBI) | compare |
| b3836 | b3836 | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0848 | ybjM | +0.3 | 1.6 | predicted inner membrane protein (NCBI) | compare |
| b3156 | yhbS | +0.3 | 2.2 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b3152 | yraR | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0461 | ybaJ | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b2738 | ygbL | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b4441 | glmY | +0.3 | 0.8 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b2264 | menD | +0.3 | 1.8 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b4582 | yoeA | +0.2 | 1.4 | no description | compare |
| b3476 | nikA | +0.2 | 2.2 | nickel transporter subunit (NCBI) | compare |
| b3940 | metL | +0.2 | 2.1 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b2071 | yegJ | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b4045 | yjbJ | +0.2 | 1.3 | predicted stress response protein (NCBI) | compare |
| b1427 | rimL | +0.2 | 1.0 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b2452 | eutH | +0.2 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b3393 | yrfB | +0.2 | 1.8 | hypothetical protein (NCBI) | compare |
| b1511 | ydeV | +0.2 | 1.3 | putative kinase (VIMSS) | compare |
| b2804 | fucU | +0.2 | 1.1 | L-fucose mutarotase (NCBI) | compare |
| b1776 | ydjL | +0.2 | 1.5 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b1930 | yedF | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b1837 | yebW | +0.2 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1419 | ydcA | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | +0.2 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b1305 | pspB | +0.2 | 1.1 | phage shock protein B (NCBI) | compare |
| b2261 | menC | +0.2 | 1.7 | O-succinylbenzoate synthase (NCBI) | compare |
| b1963 | b1963 | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4450 | arcZ | +0.2 | 1.5 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b1725 | yniA | +0.2 | 1.5 | predicted phosphotransferase/kinase (NCBI) | compare |
| b0393 | rdgC | +0.2 | 2.0 | recombination associated protein (NCBI) | compare |
| b2968 | yghD | +0.2 | 1.6 | predicted secretion pathway M-type protein, membrane anchored (NCBI) | compare |
| b1572 | ydfB | +0.2 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1349 | recT | +0.2 | 1.6 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b2471 | yffB | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b1907 | tyrP | +0.2 | 1.2 | tyrosine transporter (NCBI) | compare |
| b3032 | cpdA | +0.2 | 1.7 | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | compare |
| b0545 | ybcL | +0.2 | 1.9 | DLP12 prophage; predicted kinase inhibitor (NCBI) | compare |
| b3406 | greB | +0.2 | 1.6 | transcription elongation factor GreB (NCBI) | compare |
| b4128 | yjdK | +0.2 | 0.2 | hypothetical protein (NCBI) | compare |
| b0407 | yajC | +0.2 | 0.5 | preprotein translocase subunit YajC (NCBI) | compare |
| b4099 | phnI | +0.2 | 1.6 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b2665 | ygaU | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b4367 | fhuF | +0.2 | 1.9 | ferric iron reductase involved in ferric hydroximate transport (NCBI) | compare |
| b3725 | pstB | +0.2 | 0.1 | phosphate transporter subunit (NCBI) | compare |
| b4017 | arpA | +0.2 | 1.2 | regulator of acetyl CoA synthetase (NCBI) | compare |
| b4365 | yjjQ | +0.2 | 2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2165 | yeiN | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b2700 | ygaD | +0.2 | 0.9 | competence damage-inducible protein A (NCBI) | compare |
| b0682 | ybfN | +0.2 | 1.5 | predicted lipoprotein (NCBI) | compare |
| b1068 | mviM | +0.2 | 1.7 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |
| b3446 | yrhB | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b0864 | artP | +0.2 | 1.0 | arginine transporter subunit (NCBI) | compare |
| b2644 | yfjY | +0.2 | 1.1 | CP4-57 prophage; predicted DNA repair protein (NCBI) | compare |
| b0521 | ybcF | +0.2 | 1.1 | predicted carbamate kinase (NCBI) | compare |
| b3623 | rfaK | +0.2 | 0.7 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b3260 | dusB | +0.2 | 1.6 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b0765 | modC | +0.2 | 1.4 | molybdate transporter subunit (NCBI) | compare |
| b1150 | ymfR | +0.2 | 0.5 | e14 prophage; predicted protein (NCBI) | compare |
| b4675 | yoaJ | +0.2 | 0.7 | expressed protein (RefSeq) | compare |
| b2213 | ada | +0.2 | 1.2 | fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI) | compare |
| b0340 | cynS | +0.2 | 1.3 | cyanate hydratase (NCBI) | compare |
| b1074 | flgC | +0.2 | 1.0 | flagellar basal-body rod protein C (NCBI) | compare |
| b2445 | yffN | +0.2 | 0.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4444 | rygA | +0.2 | 1.1 | unknown RNA (NCBI) | compare |
| b1967 | hchA | +0.2 | 1.7 | chaperone protein HchA (NCBI) | compare |
| b0859 | rumB | +0.2 | 1.8 | 23S rRNA m(5)U747-methyltransferase (NCBI) | compare |
| b1287 | yciW | +0.2 | 0.9 | putative oxidoreductase (VIMSS) | compare |
| b1792 | yeaO | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |