| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -7.0 | -14.3 | alanine racemase (NCBI) | compare |
| b4237 | nrdG | -5.1 | -7.0 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -4.8 | -11.6 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -3.9 | -4.9 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1850 | eda | -3.4 | -5.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b4025 | pgi | -3.0 | -13.2 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1334 | fnr | -2.9 | -3.3 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2830 | nudH | -2.6 | -2.9 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0902 | pflA | -2.5 | -10.6 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1860 | ruvB | -2.1 | -1.9 | Holliday junction DNA helicase B (NCBI) | compare |
| b0949 | uup | -2.0 | -12.0 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0386 | proC | -2.0 | -6.0 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0243 | proA | -1.5 | -10.2 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b2330 | yfcB | -1.5 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b1236 | galU | -1.4 | -5.5 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2576 | srmB | -1.3 | -4.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b3390 | aroK | -1.3 | -2.0 | shikimate kinase I (NCBI) | compare |
| b1123 | potD | -1.3 | -7.1 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b3781 | trxA | -1.3 | -5.3 | thioredoxin 1 (VIMSS) | compare |
| b0739 | tolA | -1.3 | -2.9 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2620 | smpB | -1.3 | -1.5 | SsrA-binding protein (NCBI) | compare |
| b2329 | aroC | -1.2 | -6.2 | chorismate synthase (NCBI) | compare |
| b0222 | lpcA | -1.2 | -3.0 | phosphoheptose isomerase (NCBI) | compare |
| b0908 | aroA | -1.2 | -7.8 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2912 | ygfA | -1.2 | -2.9 | putative ligase (VIMSS) | compare |
| b1048 | mdoG | -1.2 | -6.6 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0740 | tolB | -1.1 | -2.9 | translocation protein TolB precursor (NCBI) | compare |
| b0242 | proB | -1.1 | -4.9 | gamma-glutamyl kinase (NCBI) | compare |
| b0912 | ihfB | -1.1 | -2.0 | integration host factor subunit beta (NCBI) | compare |
| b1290 | sapF | -1.1 | -2.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1125 | potB | -1.1 | -4.9 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b0903 | pflB | -1.1 | -8.5 | pyruvate formate lyase I (NCBI) | compare |
| b0990 | cspG | -1.1 | -1.7 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1124 | potC | -1.1 | -6.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2297 | pta | -1.1 | -0.7 | phosphate acetyltransferase (NCBI) | compare |
| b3389 | aroB | -1.1 | -8.7 | 3-dehydroquinate synthase (NCBI) | compare |
| b3916 | pfkA | -1.0 | -2.9 | 6-phosphofructokinase (NCBI) | compare |
| b1551 | b1551 | -1.0 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b0737 | tolQ | -1.0 | -2.1 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3281 | aroE | -1.0 | -9.0 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b0232 | yafN | -1.0 | -1.2 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0014 | dnaK | -1.0 | -3.5 | molecular chaperone DnaK (NCBI) | compare |
| b2699 | recA | -1.0 | -0.6 | recombinase A (NCBI) | compare |
| b2318 | truA | -1.0 | -2.6 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1429 | tehA | -1.0 | -1.4 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1126 | potA | -0.9 | -4.7 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1049 | mdoH | -0.9 | -7.2 | glucosyltransferase MdoH (NCBI) | compare |
| b2081 | yegQ | -0.9 | -6.4 | predicted peptidase (NCBI) | compare |
| b3341 | rpsG | -0.9 | -1.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b0738 | tolR | -0.9 | -1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3842 | rfaH | -0.9 | -4.5 | transcriptional activator RfaH (NCBI) | compare |
| b1231 | tyrT | -0.9 | -1.6 | tRNA-Tyr (NCBI) | compare |
| b3868 | glnG | -0.9 | -5.6 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1693 | aroD | -0.9 | -5.4 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2528 | iscA | -0.9 | -1.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b2659 | b2659 | -0.9 | -3.1 | orf, hypothetical protein (VIMSS) | compare |
| b0237 | pepD | -0.9 | -5.9 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b2017 | yefM | -0.9 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4178 | yjeB | -0.9 | -5.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0167 | glnD | -0.8 | -3.4 | PII uridylyl-transferase (NCBI) | compare |
| b1347 | ydaC | -0.8 | -0.5 | Rac prophage; predicted protein (NCBI) | compare |
| b2569 | lepA | -0.8 | -3.7 | GTP-binding protein LepA (NCBI) | compare |
| b2642 | yfjW | -0.8 | -1.6 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3229 | sspA | -0.8 | -1.7 | stringent starvation protein A (NCBI) | compare |
| b3493 | pitA | -0.8 | -5.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b1685 | ydiH | -0.8 | -2.1 | predicted protein (RefSeq) | compare |
| b2168 | fruK | -0.8 | -0.9 | 1-phosphofructokinase (NCBI) | compare |
| b3405 | ompR | -0.8 | -3.3 | osmolarity response regulator (NCBI) | compare |
| b0303 | ykgI | -0.8 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3706 | trmE | -0.8 | -2.8 | tRNA modification GTPase (NCBI) | compare |
| b3806 | cyaA | -0.8 | -4.3 | adenylate cyclase (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b0603 | ybdO | -0.8 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0142 | folK | -0.7 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b0437 | clpP | -0.7 | -3.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b4179 | vacB | -0.7 | -4.8 | putative enzyme (VIMSS) | compare |
| b1159 | mcrA | -0.7 | -1.3 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b4375 | prfC | -0.7 | -1.9 | peptide chain release factor 3 (NCBI) | compare |
| b3158 | yhbU | -0.7 | -5.5 | predicted peptidase (collagenase-like) (NCBI) | compare |
| b0688 | pgm | -0.7 | -2.5 | phosphoglucomutase (NCBI) | compare |
| b2562 | yfhL | -0.7 | -4.9 | predicted 4Fe-4S cluster-containing protein (NCBI) | compare |
| b4535 | yniD | -0.7 | -1.3 | predicted protein (RefSeq) | compare |
| b1235 | rssB | -0.7 | -5.0 | response regulator of RpoS (NCBI) | compare |
| b0049 | apaH | -0.7 | -1.6 | diadenosinetetraphosphatase (NCBI) | compare |
| b3863 | polA | -0.7 | -0.8 | DNA polymerase I (NCBI) | compare |
| b1351 | racC | -0.7 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b3159 | yhbV | -0.7 | -5.5 | orf, hypothetical protein (VIMSS) | compare |
| b0438 | clpX | -0.7 | -4.1 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1292 | sapC | -0.7 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4131 | cadA | -0.7 | -6.1 | lysine decarboxylase 1 (NCBI) | compare |
| b3620 | rfaF | -0.7 | -3.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0145 | dksA | -0.6 | -1.7 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1497 | b1497 | -0.6 | -0.4 | putative enzyme (VIMSS) | compare |
| b0500 | ybbD | -0.6 | -0.3 | hypothetical protein (RefSeq) | compare |
| b0890 | ftsK | -0.6 | -2.2 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2820 | recB | -0.6 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b4191 | ulaR | -0.6 | -3.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1593 | b1593 | -0.6 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1253 | yciA | -0.6 | -2.0 | predicted hydrolase (NCBI) | compare |
| b3162 | deaD | -0.6 | -2.9 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3619 | rfaD | -0.6 | -2.2 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3035 | tolC | -0.6 | -2.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3157 | yhbT | -0.6 | -2.7 | predicted lipid carrier protein (NCBI) | compare |
| b0080 | fruR | -0.6 | -3.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2055 | wcaE | -0.6 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b3164 | pnp | -0.6 | -1.9 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b4132 | cadB | -0.6 | -5.4 | predicted lysine/cadaverine transporter (NCBI) | compare |
| b0683 | fur | -0.6 | -1.0 | ferric uptake regulator (NCBI) | compare |
| b2570 | rseC | -0.6 | -3.9 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b2567 | rnc | -0.6 | -0.3 | ribonuclease III (NCBI) | compare |
| b4414 | tff | -0.6 | -1.6 | unknown RNA (NCBI) | compare |
| b1167 | ymgC | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b1257 | yciE | -0.6 | -0.3 | hypothetical protein (NCBI) | compare |
| b0082 | mraW | -0.6 | -2.0 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0677 | nagA | -0.6 | -2.9 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1536 | ydeI | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b2479 | gcvR | -0.6 | -3.0 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2104 | thiM | -0.6 | -2.2 | hydroxyethylthiazole kinase (NCBI) | compare |
| b0357 | yaiN | -0.6 | -1.2 | putative alpha helix chain (VIMSS) | compare |
| b2894 | xerD | -0.6 | -0.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3052 | rfaE | -0.6 | -2.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1690 | ydiM | -0.6 | -1.7 | predicted transporter (NCBI) | compare |
| b4402 | yjjY | -0.6 | -0.7 | hypothetical protein (NCBI) | compare |
| b1818 | manY | -0.6 | -1.9 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1187 | fadR | -0.6 | -2.3 | fatty acid metabolism regulator (NCBI) | compare |
| b1499 | ydeO | -0.6 | -0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1518 | lsrG | -0.6 | -1.0 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1863 | ruvC | -0.5 | -1.1 | Holliday junction resolvase (NCBI) | compare |
| b0975 | hyaD | -0.5 | -3.1 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b1291 | sapD | -0.5 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1259 | yciG | -0.5 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0741 | pal | -0.5 | -1.9 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0957 | ompA | -0.5 | -2.7 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4503 | yafF | -0.5 | -0.8 | no description | compare |
| b1192 | ldcA | -0.5 | -1.3 | L,D-carboxypeptidase A (NCBI) | compare |
| b3630 | rfaP | -0.5 | -4.3 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b1576 | ydfD | -0.5 | -0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b2553 | glnB | -0.5 | -2.5 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b4066 | yjcF | -0.5 | -0.5 | hypothetical protein (NCBI) | compare |
| b1363 | trkG | -0.5 | -0.4 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b3811 | xerC | -0.5 | -0.8 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1284 | yciT | -0.5 | -3.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3500 | gor | -0.5 | -1.3 | glutathione reductase (NCBI) | compare |
| b3930 | menA | -0.5 | -4.4 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b4202 | rpsR | -0.5 | -1.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b0425 | panE | -0.5 | -4.0 | 2-dehydropantoate 2-reductase (NCBI) | compare |
| b3002 | yqhA | -0.5 | -1.2 | hypothetical protein (NCBI) | compare |
| b4702 | mgtL | -0.5 | -1.6 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1842 | holE | -0.5 | -1.4 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1196 | ycgY | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b1862 | yebB | -0.5 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1627 | rsxA | -0.5 | -2.2 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b4520 | ymgF | -0.5 | -1.2 | hypothetical protein (NCBI) | compare |
| b1589 | ynfG | -0.5 | -1.4 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b2501 | ppk | -0.5 | -3.5 | polyphosphate kinase (NCBI) | compare |
| b1412 | azoR | -0.5 | -2.1 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b0018 | mokC | -0.5 | -1.1 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b0948 | ycbY | -0.5 | -3.1 | predicted methyltransferase (NCBI) | compare |
| b2704 | srlB | -0.5 | -2.0 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b3742 | mioC | -0.5 | -3.2 | flavodoxin (NCBI) | compare |
| b1785 | yeaI | -0.5 | -1.8 | predicted diguanylate cyclase (NCBI) | compare |
| b1804 | rnd | -0.5 | -2.8 | ribonuclease D (NCBI) | compare |
| b3082 | ygjM | -0.5 | -1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1643 | ydhI | -0.5 | -2.4 | predicted inner membrane protein (NCBI) | compare |
| b4593 | ymgI | -0.5 | -0.7 | hypothetical protein (RefSeq) | compare |
| b2093 | gatB | -0.5 | -3.0 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b1730 | ydjO | -0.5 | -0.8 | predicted protein (RefSeq) | compare |
| b2085 | b2085 | -0.5 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3204 | ptsN | -0.5 | -2.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b4443 | gcvB | -0.5 | -0.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b4436 | ryeC | -0.4 | -1.2 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b3465 | yhhF | -0.4 | -3.0 | predicted methyltransferase (NCBI) | compare |
| b0125 | hpt | -0.4 | -2.4 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b1594 | dgsA | -0.4 | -2.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1527 | yneK | -0.4 | -1.5 | hypothetical protein (NCBI) | compare |
| b3115 | tdcD | -0.4 | -4.2 | propionate kinase/acetate kinase C, anaerobic (RefSeq) | compare |
| b1505 | ydeT | -0.4 | -0.9 | hypothetical protein (RefSeq) | compare |
| b2597 | yfiA | -0.4 | -1.3 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0767 | ybhE | -0.4 | -2.2 | 6-phosphogluconolactonase (NCBI) | compare |
| b2393 | nupC | -0.4 | -3.4 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b2080 | b2080 | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3387 | dam | -0.4 | -3.6 | DNA adenine methylase (NCBI) | compare |
| b4133 | cadC | -0.4 | -3.9 | DNA-binding transcriptional activator (NCBI) | compare |
| b0436 | tig | -0.4 | -3.1 | trigger factor (NCBI) | compare |
| b0053 | surA | -0.4 | -2.8 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0279 | yagM | -0.4 | -0.4 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b2319 | usg | -0.4 | -2.0 | hypothetical protein (NCBI) | compare |
| b0560 | nohB | -0.4 | -1.3 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b0200 | gmhB | -0.4 | -0.6 | hypothetical protein (NCBI) | compare |
| b4577 | sgrS | -0.4 | -1.8 | small antisense RNA (NCBI) | compare |
| b4426 | isrA | -0.4 | -1.8 | unknown RNA (NCBI) | compare |
| b0658 | ybeX | -0.4 | -0.5 | predicteed ion transport (NCBI) | compare |
| b2853 | ygeI | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b2847 | yqeI | -0.4 | -0.3 | predicted transcriptional regulator (NCBI) | compare |
| b4676 | yoaK | -0.4 | -0.4 | expressed protein (RefSeq) | compare |
| b2735 | ygbI | -0.4 | -2.5 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2498 | upp | -0.4 | -1.3 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3649 | rpoZ | -0.4 | -1.5 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b1222 | narX | -0.4 | -2.3 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b3545 | proK | -0.4 | -1.4 | tRNA-Pro (NCBI) | compare |