| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -7.5 | -12.5 | alanine racemase (NCBI) | compare |
| b0462 | acrB | -7.1 | -30.3 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -6.9 | -21.3 | multidrug efflux system (NCBI) | compare |
| b4237 | nrdG | -5.6 | -6.6 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -5.2 | -8.7 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -4.1 | -5.1 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4201 | priB | -3.6 | -6.0 | primosomal replication protein N (NCBI) | compare |
| b1334 | fnr | -2.7 | -2.5 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0386 | proC | -2.3 | -6.0 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b3035 | tolC | -2.2 | -1.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b1850 | eda | -2.0 | -2.6 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b4202 | rpsR | -1.9 | -2.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b0243 | proA | -1.8 | -10.8 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b4025 | pgi | -1.8 | -11.2 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2620 | smpB | -1.7 | -1.8 | SsrA-binding protein (NCBI) | compare |
| b1192 | ldcA | -1.7 | -2.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b2912 | ygfA | -1.7 | -3.7 | putative ligase (VIMSS) | compare |
| b0902 | pflA | -1.7 | -8.4 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1187 | fadR | -1.6 | -3.3 | fatty acid metabolism regulator (NCBI) | compare |
| b0200 | gmhB | -1.6 | -1.8 | hypothetical protein (NCBI) | compare |
| b0949 | uup | -1.5 | -10.0 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0912 | ihfB | -1.4 | -2.7 | integration host factor subunit beta (NCBI) | compare |
| b0242 | proB | -1.4 | -6.1 | gamma-glutamyl kinase (NCBI) | compare |
| b1804 | rnd | -1.4 | -6.8 | ribonuclease D (NCBI) | compare |
| b1860 | ruvB | -1.3 | -1.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b2820 | recB | -1.2 | -0.8 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1290 | sapF | -1.2 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1855 | lpxM | -1.2 | -4.6 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1236 | galU | -1.1 | -4.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3868 | glnG | -1.1 | -6.4 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b3500 | gor | -1.1 | -2.6 | glutathione reductase (NCBI) | compare |
| b4593 | ymgI | -1.1 | -1.3 | hypothetical protein (RefSeq) | compare |
| b3390 | aroK | -1.1 | -2.6 | shikimate kinase I (NCBI) | compare |
| b3781 | trxA | -1.1 | -4.9 | thioredoxin 1 (VIMSS) | compare |
| b3741 | gidA | -1.1 | -2.9 | glucose-inhibited division protein A (NCBI) | compare |
| b0149 | mrcB | -1.0 | -8.7 | penicillin-binding protein 1b (NCBI) | compare |
| b0741 | pal | -1.0 | -3.2 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0688 | pgm | -1.0 | -3.2 | phosphoglucomutase (NCBI) | compare |
| b1863 | ruvC | -1.0 | -1.5 | Holliday junction resolvase (NCBI) | compare |
| b0303 | ykgI | -1.0 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2659 | b2659 | -1.0 | -3.3 | orf, hypothetical protein (VIMSS) | compare |
| b0728 | sucC | -0.9 | -5.8 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b4066 | yjcF | -0.9 | -0.6 | hypothetical protein (NCBI) | compare |
| b2576 | srmB | -0.9 | -3.2 | ATP-dependent RNA helicase (NCBI) | compare |
| b2501 | ppk | -0.9 | -6.3 | polyphosphate kinase (NCBI) | compare |
| b0903 | pflB | -0.9 | -6.4 | pyruvate formate lyase I (NCBI) | compare |
| b2528 | iscA | -0.9 | -1.4 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0167 | glnD | -0.9 | -3.8 | PII uridylyl-transferase (NCBI) | compare |
| b1123 | potD | -0.9 | -5.4 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b2814 | metZ | -0.9 | -2.0 | tRNA-Met (NCBI) | compare |
| b0739 | tolA | -0.8 | -2.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4701 | sokX | -0.8 | -1.0 | sok-related sRNA, function unknown (RefSeq) | compare |
| b2699 | recA | -0.8 | -0.5 | recombinase A (NCBI) | compare |
| b0908 | aroA | -0.8 | -5.6 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b3493 | pitA | -0.8 | -5.5 | phosphate transporter, low-affinity (NCBI) | compare |
| b2704 | srlB | -0.8 | -4.3 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4255 | yjgD | -0.8 | -4.8 | hypothetical protein (NCBI) | compare |
| b3930 | menA | -0.8 | -7.0 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b2329 | aroC | -0.8 | -4.2 | chorismate synthase (NCBI) | compare |
| b1712 | ihfA | -0.8 | -0.5 | integration host factor subunit alpha (NCBI) | compare |
| b1124 | potC | -0.8 | -4.5 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3935 | priA | -0.8 | -2.8 | primosome assembly protein PriA (NCBI) | compare |
| b4451 | ryhB | -0.8 | -2.6 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2110 | yehC | -0.8 | -1.4 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3842 | rfaH | -0.8 | -4.1 | transcriptional activator RfaH (NCBI) | compare |
| b3728 | pstS | -0.8 | -3.2 | phosphate transporter subunit (NCBI) | compare |
| b1104 | ycfL | -0.7 | -2.5 | hypothetical protein (NCBI) | compare |
| b0014 | dnaK | -0.7 | -2.7 | molecular chaperone DnaK (NCBI) | compare |
| b2318 | truA | -0.7 | -2.5 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1253 | yciA | -0.7 | -2.8 | predicted hydrolase (NCBI) | compare |
| b1304 | pspA | -0.7 | -3.4 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3162 | deaD | -0.7 | -3.5 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1259 | yciG | -0.7 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4545 | ypdJ | -0.7 | -2.5 | no description | compare |
| b1628 | rsxB | -0.7 | -3.1 | electron transport complex protein RnfB (NCBI) | compare |
| b0222 | lpcA | -0.7 | -2.0 | phosphoheptose isomerase (NCBI) | compare |
| b2531 | iscR | -0.7 | -1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0740 | tolB | -0.7 | -1.8 | translocation protein TolB precursor (NCBI) | compare |
| b2822 | recC | -0.7 | -3.8 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b3183 | obgE | -0.7 | -1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1589 | ynfG | -0.7 | -1.7 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b0737 | tolQ | -0.7 | -1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4402 | yjjY | -0.7 | -0.8 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -0.7 | -2.6 | tRNA modification GTPase (NCBI) | compare |
| b1126 | potA | -0.6 | -3.7 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b3619 | rfaD | -0.6 | -2.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1293 | sapB | -0.6 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2297 | pta | -0.6 | -0.5 | phosphate acetyltransferase (NCBI) | compare |
| b2625 | yfjI | -0.6 | -1.3 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b0729 | sucD | -0.6 | -3.3 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3977 | tyrU | -0.6 | -0.8 | tRNA-Tyr (NCBI) | compare |
| b0560 | nohB | -0.6 | -2.9 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1217 | chaB | -0.6 | -1.7 | cation transport regulator (NCBI) | compare |
| b3806 | cyaA | -0.6 | -3.9 | adenylate cyclase (NCBI) | compare |
| b4375 | prfC | -0.6 | -1.8 | peptide chain release factor 3 (NCBI) | compare |
| b1271 | yciK | -0.6 | -2.2 | short chain dehydrogenase (NCBI) | compare |
| b2830 | nudH | -0.6 | -0.9 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2352 | yfdI | -0.6 | -0.6 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b1292 | sapC | -0.6 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2553 | glnB | -0.6 | -2.5 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3119 | tdcR | -0.6 | -2.0 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b2498 | upp | -0.6 | -1.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b1125 | potB | -0.6 | -2.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2330 | yfcB | -0.6 | -0.8 | putative adenine-specific methylase (VIMSS) | compare |
| b1429 | tehA | -0.6 | -1.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1286 | rnb | -0.6 | -1.3 | exoribonuclease II (NCBI) | compare |
| b1291 | sapD | -0.6 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1518 | lsrG | -0.6 | -1.1 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b1347 | ydaC | -0.5 | -0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b3115 | tdcD | -0.5 | -5.1 | propionate kinase/acetate kinase C, anaerobic (RefSeq) | compare |
| b4191 | ulaR | -0.5 | -2.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1268 | yciQ | -0.5 | -3.8 | predicted inner membrane protein (NCBI) | compare |
| b2024 | hisA | -0.5 | -2.0 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b0970 | yccA | -0.5 | -2.8 | inner membrane protein (NCBI) | compare |
| b0705 | ybfL | -0.5 | -0.3 | putative receptor protein (VIMSS) | compare |
| b3792 | wzxE | -0.5 | -3.7 | O-antigen translocase (NCBI) | compare |
| b0975 | hyaD | -0.5 | -2.9 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b3341 | rpsG | -0.5 | -1.1 | 30S ribosomal protein S7 (NCBI) | compare |
| b0053 | surA | -0.5 | -3.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3281 | aroE | -0.5 | -4.7 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b1595 | ynfL | -0.5 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1527 | yneK | -0.5 | -1.6 | hypothetical protein (NCBI) | compare |
| b1540 | ydfH | -0.5 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1505 | ydeT | -0.5 | -0.8 | hypothetical protein (RefSeq) | compare |
| b0237 | pepD | -0.5 | -3.6 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b2652 | ileY | -0.5 | -0.6 | tRNA-Ile (NCBI) | compare |
| b3052 | rfaE | -0.5 | -2.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3229 | sspA | -0.5 | -1.3 | stringent starvation protein A (NCBI) | compare |
| b2285 | nuoE | -0.5 | -1.6 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1171 | b1171 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0999 | cbpM | -0.5 | -2.4 | modulator of CbpA co-chaperone (NCBI) | compare |
| b2846 | yqeH | -0.5 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b2951 | yggS | -0.5 | -2.3 | predicted enzyme (NCBI) | compare |
| b2104 | thiM | -0.5 | -2.1 | hydroxyethylthiazole kinase (NCBI) | compare |
| b3389 | aroB | -0.5 | -4.1 | 3-dehydroquinate synthase (NCBI) | compare |
| b2614 | grpE | -0.5 | -1.8 | heat shock protein (NCBI) | compare |
| b2081 | yegQ | -0.5 | -3.6 | predicted peptidase (NCBI) | compare |
| b2479 | gcvR | -0.5 | -2.3 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0357 | yaiN | -0.5 | -1.5 | putative alpha helix chain (VIMSS) | compare |
| b2248 | yfaX | -0.5 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1048 | mdoG | -0.5 | -2.8 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b3026 | qseC | -0.5 | -1.7 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0500 | ybbD | -0.5 | -0.2 | hypothetical protein (RefSeq) | compare |
| b1273 | yciN | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| b0234 | yafP | -0.5 | -1.2 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4462 | ygaQ | -0.5 | -1.1 | hypothetical protein (RefSeq) | compare |
| b1921 | fliZ | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0118 | acnB | -0.5 | -0.5 | aconitate hydratase (NCBI) | compare |
| b0049 | apaH | -0.5 | -1.1 | diadenosinetetraphosphatase (NCBI) | compare |
| b1231 | tyrT | -0.5 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b4407 | thiS | -0.5 | -0.8 | sulfur carrier protein ThiS (NCBI) | compare |
| b1824 | yobF | -0.5 | -1.6 | hypothetical protein (NCBI) | compare |
| b1147 | ymfL | -0.5 | -1.5 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2562 | yfhL | -0.5 | -3.7 | predicted 4Fe-4S cluster-containing protein (NCBI) | compare |
| b0706 | ybfD | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b1235 | rssB | -0.5 | -3.0 | response regulator of RpoS (NCBI) | compare |
| b3766 | ilvL | -0.5 | -1.9 | ilvG operon leader peptide (NCBI) | compare |
| b3387 | dam | -0.5 | -3.6 | DNA adenine methylase (NCBI) | compare |
| b0677 | nagA | -0.4 | -2.5 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4547 | ypfN | -0.4 | -2.5 | hypothetical protein (NCBI) | compare |
| b0232 | yafN | -0.4 | -0.6 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b4414 | tff | -0.4 | -1.5 | unknown RNA (NCBI) | compare |
| b2343 | b2343 | -0.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1279 | yciS | -0.4 | -0.9 | conserved inner membrane protein (NCBI) | compare |
| b3620 | rfaF | -0.4 | -2.3 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3609 | secB | -0.4 | -2.1 | export protein SecB (NCBI) | compare |
| b0738 | tolR | -0.4 | -0.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1222 | narX | -0.4 | -2.7 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b2105 | yohL | -0.4 | -2.1 | hypothetical protein (NCBI) | compare |
| b2047 | wcaJ | -0.4 | -2.5 | predicted UDP-glucose lipid carrier transferase (NCBI) | compare |
| b1630 | rsxD | -0.4 | -2.4 | electron transport complex protein RnfD (NCBI) | compare |
| b4647 | mokA | -0.4 | -0.7 | no description | compare |
| b1684 | sufA | -0.4 | -1.9 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b1814 | sdaA | -0.4 | -2.5 | L-serine deaminase I (NCBI) | compare |
| b1012 | b1012 | -0.4 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2082 | ogrK | -0.4 | -2.1 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b1282 | yciH | -0.4 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1536 | ydeI | -0.4 | -0.5 | hypothetical protein (NCBI) | compare |
| b1594 | dgsA | -0.4 | -1.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2012 | yeeD | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| b1648 | b1648 | -0.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0082 | mraW | -0.4 | -1.4 | S-adenosyl-methyltransferase (NCBI) | compare |
| b4577 | sgrS | -0.4 | -1.5 | small antisense RNA (NCBI) | compare |
| b1627 | rsxA | -0.4 | -2.0 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b1634 | tppB | -0.4 | -2.7 | putative tripeptide transporter permease (NCBI) | compare |
| b1241 | adhE | -0.4 | -3.2 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b3884 | yihW | -0.4 | -2.9 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b1861 | ruvA | -0.4 | -0.5 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1368 | ynaA | -0.4 | -1.7 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b1563 | relE | -0.4 | -1.2 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1617 | uidA | -0.4 | -2.6 | beta-D-glucuronidase (NCBI) | compare |
| b2058 | wcaB | -0.4 | -0.8 | predicted acyl transferase (NCBI) | compare |
| b1351 | racC | -0.4 | -0.2 | Rac prophage; predicted protein (NCBI) | compare |
| b3631 | rfaG | -0.4 | -3.6 | glucosyltransferase I (NCBI) | compare |
| b0603 | ybdO | -0.4 | -0.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2266 | elaB | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| b4179 | vacB | -0.4 | -2.6 | putative enzyme (VIMSS) | compare |
| b4552 | yrhC | -0.4 | -0.7 | no description | compare |
| b4178 | yjeB | -0.4 | -2.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2567 | rnc | -0.4 | -0.2 | ribonuclease III (NCBI) | compare |