| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -7.8 | -12.0 | alanine racemase (NCBI) | compare |
| b0462 | acrB | -7.6 | -27.8 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -7.3 | -19.0 | multidrug efflux system (NCBI) | compare |
| b4237 | nrdG | -5.4 | -6.4 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -4.9 | -12.3 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -4.1 | -5.7 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1334 | fnr | -3.1 | -2.1 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0912 | ihfB | -2.8 | -3.9 | integration host factor subunit beta (NCBI) | compare |
| b2330 | yfcB | -2.4 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b0386 | proC | -2.2 | -6.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b4201 | priB | -2.2 | -4.9 | primosomal replication protein N (NCBI) | compare |
| b3035 | tolC | -2.1 | -2.1 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0990 | cspG | -2.1 | -2.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0949 | uup | -2.0 | -11.8 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1850 | eda | -1.9 | -3.3 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0243 | proA | -1.8 | -12.6 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b1860 | ruvB | -1.8 | -1.2 | Holliday junction DNA helicase B (NCBI) | compare |
| b1291 | sapD | -1.8 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0902 | pflA | -1.7 | -7.5 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b2830 | nudH | -1.7 | -2.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2846 | yqeH | -1.7 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2912 | ygfA | -1.6 | -3.7 | putative ligase (VIMSS) | compare |
| b1292 | sapC | -1.6 | -3.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0242 | proB | -1.5 | -6.2 | gamma-glutamyl kinase (NCBI) | compare |
| b2642 | yfjW | -1.5 | -2.4 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3977 | tyrU | -1.4 | -1.5 | tRNA-Tyr (NCBI) | compare |
| b1187 | fadR | -1.4 | -3.2 | fatty acid metabolism regulator (NCBI) | compare |
| b1124 | potC | -1.3 | -7.1 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3868 | glnG | -1.3 | -8.3 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b1125 | potB | -1.3 | -6.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1293 | sapB | -1.2 | -2.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1123 | potD | -1.2 | -6.2 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b2820 | recB | -1.1 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3781 | trxA | -1.1 | -5.4 | thioredoxin 1 (VIMSS) | compare |
| b0728 | sucC | -1.1 | -6.8 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0167 | glnD | -1.1 | -5.3 | PII uridylyl-transferase (NCBI) | compare |
| b1648 | b1648 | -1.1 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1855 | lpxM | -1.1 | -4.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0740 | tolB | -1.1 | -2.5 | translocation protein TolB precursor (NCBI) | compare |
| b1126 | potA | -1.1 | -5.6 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2017 | yefM | -1.0 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0903 | pflB | -1.0 | -7.8 | pyruvate formate lyase I (NCBI) | compare |
| b0014 | dnaK | -1.0 | -3.7 | molecular chaperone DnaK (NCBI) | compare |
| b1286 | rnb | -1.0 | -2.2 | exoribonuclease II (NCBI) | compare |
| b0729 | sucD | -1.0 | -4.6 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b0200 | gmhB | -1.0 | -1.5 | hypothetical protein (NCBI) | compare |
| b4202 | rpsR | -1.0 | -2.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b1865 | nudB | -1.0 | -1.6 | dATP pyrophosphohydrolase (NCBI) | compare |
| b4066 | yjcF | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b3935 | priA | -0.9 | -3.5 | primosome assembly protein PriA (NCBI) | compare |
| b0739 | tolA | -0.9 | -2.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4535 | yniD | -0.9 | -1.7 | predicted protein (RefSeq) | compare |
| b4177 | purA | -0.9 | -2.2 | adenylosuccinate synthetase (NCBI) | compare |
| b0688 | pgm | -0.9 | -2.8 | phosphoglucomutase (NCBI) | compare |
| b3741 | gidA | -0.9 | -2.9 | glucose-inhibited division protein A (NCBI) | compare |
| b3162 | deaD | -0.9 | -4.1 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1358 | ydaT | -0.8 | -1.0 | Rac prophage; predicted protein (NCBI) | compare |
| b1861 | ruvA | -0.8 | -0.9 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3229 | sspA | -0.8 | -2.2 | stringent starvation protein A (NCBI) | compare |
| b1259 | yciG | -0.8 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b2659 | b2659 | -0.8 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b1818 | manY | -0.8 | -2.0 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b0741 | pal | -0.8 | -2.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4163 | glyV | -0.8 | -1.7 | tRNA-Gly (NCBI) | compare |
| b2699 | recA | -0.8 | -0.5 | recombinase A (NCBI) | compare |
| b0683 | fur | -0.8 | -1.5 | ferric uptake regulator (NCBI) | compare |
| b1804 | rnd | -0.8 | -2.9 | ribonuclease D (NCBI) | compare |
| b0737 | tolQ | -0.8 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1278 | pgpB | -0.8 | -2.0 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2576 | srmB | -0.8 | -2.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b1550 | b1550 | -0.7 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2808 | gcvA | -0.7 | -3.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4503 | yafF | -0.7 | -0.9 | no description | compare |
| b1863 | ruvC | -0.7 | -1.1 | Holliday junction resolvase (NCBI) | compare |
| b2501 | ppk | -0.7 | -4.9 | polyphosphate kinase (NCBI) | compare |
| b1830 | prc | -0.7 | -3.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b4375 | prfC | -0.7 | -2.1 | peptide chain release factor 3 (NCBI) | compare |
| b2110 | yehC | -0.7 | -1.2 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b2620 | smpB | -0.7 | -0.9 | SsrA-binding protein (NCBI) | compare |
| b2343 | b2343 | -0.6 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1677 | lpp | -0.6 | -1.7 | murein lipoprotein (NCBI) | compare |
| b3619 | rfaD | -0.6 | -2.6 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3390 | aroK | -0.6 | -1.8 | shikimate kinase I (NCBI) | compare |
| b3493 | pitA | -0.6 | -4.1 | phosphate transporter, low-affinity (NCBI) | compare |
| b1628 | rsxB | -0.6 | -2.5 | electron transport complex protein RnfB (NCBI) | compare |
| b1217 | chaB | -0.6 | -1.6 | cation transport regulator (NCBI) | compare |
| b4462 | ygaQ | -0.6 | -1.4 | hypothetical protein (RefSeq) | compare |
| b0125 | hpt | -0.6 | -3.3 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2498 | upp | -0.6 | -1.8 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3204 | ptsN | -0.6 | -3.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1088 | yceD | -0.6 | -2.5 | hypothetical protein (NCBI) | compare |
| b1730 | ydjO | -0.6 | -0.8 | predicted protein (RefSeq) | compare |
| b3916 | pfkA | -0.6 | -1.9 | 6-phosphofructokinase (NCBI) | compare |
| b2215 | ompC | -0.6 | -4.3 | outer membrane porin protein C (NCBI) | compare |
| b3609 | secB | -0.6 | -2.4 | export protein SecB (NCBI) | compare |
| b1726 | yniB | -0.6 | -1.8 | predicted inner membrane protein (NCBI) | compare |
| b4426 | isrA | -0.6 | -1.6 | unknown RNA (NCBI) | compare |
| b3649 | rpoZ | -0.6 | -2.7 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0237 | pepD | -0.6 | -4.3 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b4702 | mgtL | -0.6 | -1.8 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3792 | wzxE | -0.6 | -3.6 | O-antigen translocase (NCBI) | compare |
| b3706 | trmE | -0.6 | -2.4 | tRNA modification GTPase (NCBI) | compare |
| b1537 | ydeJ | -0.5 | -2.3 | competence damage-inducible protein A (NCBI) | compare |
| b2569 | lepA | -0.5 | -2.6 | GTP-binding protein LepA (NCBI) | compare |
| b1593 | b1593 | -0.5 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b3930 | menA | -0.5 | -4.8 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b1236 | galU | -0.5 | -2.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b2754 | ygbF | -0.5 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2262 | menB | -0.5 | -3.1 | naphthoate synthase (NCBI) | compare |
| b1108 | ycfP | -0.5 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1438 | ydcQ | -0.5 | -2.0 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1269 | rluB | -0.5 | -2.8 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b1171 | b1171 | -0.5 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1192 | ldcA | -0.5 | -1.2 | L,D-carboxypeptidase A (NCBI) | compare |
| b4552 | yrhC | -0.5 | -1.0 | no description | compare |
| b2189 | proL | -0.5 | -1.4 | tRNA-Pro (NCBI) | compare |
| b2646 | ypjF | -0.5 | -1.8 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b0053 | surA | -0.5 | -3.3 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3052 | rfaE | -0.5 | -2.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1636 | pdxY | -0.5 | -2.8 | pyridoxine kinase (NCBI) | compare |
| b0685 | ybfE | -0.5 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b3405 | ompR | -0.5 | -2.2 | osmolarity response regulator (NCBI) | compare |
| b2822 | recC | -0.5 | -2.9 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2911 | ssrS | -0.5 | -1.5 | 6S regulatory RNA (NCBI) | compare |
| b0948 | ycbY | -0.5 | -3.3 | predicted methyltransferase (NCBI) | compare |
| b2258 | b2258 | -0.5 | -1.1 | putative transport/receptor protein (VIMSS) | compare |
| b4416 | rybA | -0.5 | -1.2 | unknown RNA (NCBI) | compare |
| b1588 | ynfF | -0.5 | -2.6 | oxidoreductase subunit (RefSeq) | compare |
| b2297 | pta | -0.5 | -0.4 | phosphate acetyltransferase (NCBI) | compare |
| b3183 | obgE | -0.5 | -0.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1620 | malI | -0.5 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1148 | ymfM | -0.5 | -2.1 | e14 prophage; predicted protein (NCBI) | compare |
| b1563 | relE | -0.5 | -0.9 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1247 | oppF | -0.5 | -2.1 | oligopeptide transporter subunit (NCBI) | compare |
| b0149 | mrcB | -0.4 | -3.9 | penicillin-binding protein 1b (NCBI) | compare |
| b1271 | yciK | -0.4 | -1.6 | short chain dehydrogenase (NCBI) | compare |
| b3163 | nlpI | -0.4 | -2.1 | hypothetical protein (NCBI) | compare |
| b1685 | ydiH | -0.4 | -1.2 | predicted protein (RefSeq) | compare |
| b1104 | ycfL | -0.4 | -0.7 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | -0.4 | -2.6 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1513 | lsrA | -0.4 | -2.6 | fused AI2 transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1575 | dicB | -0.4 | -1.0 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1290 | sapF | -0.4 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3026 | qseC | -0.4 | -1.6 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b1560 | ydfU | -0.4 | -2.7 | Qin prophage; predicted protein (RefSeq) | compare |
| b0965 | b0965 | -0.4 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3811 | xerC | -0.4 | -0.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3652 | recG | -0.4 | -3.4 | ATP-dependent DNA helicase (NCBI) | compare |
| b0088 | murD | -0.4 | -1.6 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1594 | dgsA | -0.4 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b4191 | ulaR | -0.4 | -2.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2329 | aroC | -0.4 | -2.3 | chorismate synthase (NCBI) | compare |
| b1612 | fumA | -0.4 | -2.3 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b3621 | rfaC | -0.4 | -2.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2093 | gatB | -0.4 | -2.4 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b3728 | pstS | -0.4 | -2.0 | phosphate transporter subunit (NCBI) | compare |
| b3341 | rpsG | -0.4 | -0.8 | 30S ribosomal protein S7 (NCBI) | compare |
| b0560 | nohB | -0.4 | -2.0 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1531 | marA | -0.4 | -1.9 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b4255 | yjgD | -0.4 | -2.7 | hypothetical protein (NCBI) | compare |
| b0118 | acnB | -0.4 | -0.4 | aconitate hydratase (NCBI) | compare |
| b2894 | xerD | -0.4 | -0.4 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1814 | sdaA | -0.4 | -1.8 | L-serine deaminase I (NCBI) | compare |
| b1523 | yneG | -0.4 | -1.4 | hypothetical protein (NCBI) | compare |
| b3238 | yhcN | -0.4 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1642 | slyA | -0.4 | -1.0 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b0603 | ybdO | -0.4 | -0.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4151 | frdD | -0.4 | -2.0 | fumarate reductase subunit D (NCBI) | compare |
| b2318 | truA | -0.4 | -1.0 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1890 | motA | -0.4 | -1.8 | flagellar motor protein MotA (NCBI) | compare |
| b4414 | tff | -0.4 | -1.8 | unknown RNA (NCBI) | compare |
| b0145 | dksA | -0.4 | -1.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2047 | wcaJ | -0.4 | -2.6 | predicted UDP-glucose lipid carrier transferase (NCBI) | compare |
| b0234 | yafP | -0.4 | -0.9 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b2562 | yfhL | -0.4 | -2.9 | predicted 4Fe-4S cluster-containing protein (NCBI) | compare |
| b0890 | ftsK | -0.4 | -1.3 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b0908 | aroA | -0.4 | -2.9 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2285 | nuoE | -0.4 | -1.2 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1907 | tyrP | -0.4 | -1.9 | tyrosine transporter (NCBI) | compare |
| b3863 | polA | -0.4 | -0.5 | DNA polymerase I (NCBI) | compare |
| b1931 | yedK | -0.4 | -2.0 | hypothetical protein (NCBI) | compare |
| b1617 | uidA | -0.4 | -2.3 | beta-D-glucuronidase (NCBI) | compare |
| b3404 | envZ | -0.4 | -2.9 | osmolarity sensor protein (NCBI) | compare |
| b3813 | uvrD | -0.4 | -3.3 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b1524 | yneH | -0.4 | -0.6 | predicted glutaminase (NCBI) | compare |
| b0303 | ykgI | -0.4 | -0.4 | orf, hypothetical protein (VIMSS) | compare |
| b1540 | ydfH | -0.4 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4025 | pgi | -0.4 | -2.8 | glucose-6-phosphate isomerase (NCBI) | compare |
| b2081 | yegQ | -0.4 | -2.8 | predicted peptidase (NCBI) | compare |
| b3778 | rep | -0.4 | -2.8 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1516 | lsrB | -0.4 | -1.9 | AI2 transporter (NCBI) | compare |
| b1262 | trpC | -0.4 | -2.1 | N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) | compare |
| b1322 | ycjF | -0.4 | -2.6 | hypothetical protein (NCBI) | compare |
| b1522 | yneF | -0.3 | -2.2 | predicted diguanylate cyclase (NCBI) | compare |
| b2058 | wcaB | -0.3 | -0.7 | predicted acyl transferase (NCBI) | compare |
| b3098 | yqjD | -0.3 | -1.8 | hypothetical protein (NCBI) | compare |
| b2299 | yfcD | -0.3 | -2.1 | predicted NUDIX hydrolase (NCBI) | compare |
| b0767 | ybhE | -0.3 | -1.9 | 6-phosphogluconolactonase (NCBI) | compare |
| b1589 | ynfG | -0.3 | -1.8 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b2553 | glnB | -0.3 | -1.6 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |