| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -5.9 | -19.3 | alanine racemase (NCBI) | compare |
| b4237 | nrdG | -4.7 | -9.0 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -4.7 | -14.0 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -4.2 | -5.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b0949 | uup | -2.2 | -13.4 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0386 | proC | -2.0 | -5.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2912 | ygfA | -1.8 | -3.8 | putative ligase (VIMSS) | compare |
| b2017 | yefM | -1.7 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0243 | proA | -1.7 | -10.8 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b1850 | eda | -1.7 | -3.7 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b2620 | smpB | -1.6 | -1.7 | SsrA-binding protein (NCBI) | compare |
| b4202 | rpsR | -1.5 | -2.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b0242 | proB | -1.5 | -7.1 | gamma-glutamyl kinase (NCBI) | compare |
| b0200 | gmhB | -1.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b1346 | ydaQ | -1.4 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b0232 | yafN | -1.3 | -1.1 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b0902 | pflA | -1.3 | -7.0 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b1334 | fnr | -1.3 | -1.7 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b2330 | yfcB | -1.3 | -1.4 | putative adenine-specific methylase (VIMSS) | compare |
| b0903 | pflB | -1.1 | -9.1 | pyruvate formate lyase I (NCBI) | compare |
| b1563 | relE | -1.1 | -2.1 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b2820 | recB | -1.1 | -1.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3868 | glnG | -1.1 | -7.1 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b4171 | miaA | -1.0 | -3.7 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0912 | ihfB | -1.0 | -2.6 | integration host factor subunit beta (NCBI) | compare |
| b2642 | yfjW | -1.0 | -1.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3781 | trxA | -1.0 | -4.3 | thioredoxin 1 (VIMSS) | compare |
| b1984 | asnW | -0.9 | -1.6 | tRNA-Asn (NCBI) | compare |
| b0739 | tolA | -0.9 | -2.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0990 | cspG | -0.9 | -1.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1286 | rnb | -0.9 | -1.8 | exoribonuclease II (NCBI) | compare |
| b1126 | potA | -0.8 | -5.6 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1506 | yneL | -0.8 | -1.4 | predicted transcriptional regulator (NCBI) | compare |
| b3035 | tolC | -0.8 | -3.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3183 | obgE | -0.8 | -1.3 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4535 | yniD | -0.8 | -1.5 | predicted protein (RefSeq) | compare |
| b3930 | menA | -0.8 | -7.2 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b0222 | lpcA | -0.8 | -2.3 | phosphoheptose isomerase (NCBI) | compare |
| b1124 | potC | -0.8 | -5.1 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2262 | menB | -0.8 | -3.6 | naphthoate synthase (NCBI) | compare |
| b2808 | gcvA | -0.8 | -3.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3229 | sspA | -0.8 | -2.1 | stringent starvation protein A (NCBI) | compare |
| b2830 | nudH | -0.8 | -1.2 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0142 | folK | -0.7 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2659 | b2659 | -0.7 | -3.0 | orf, hypothetical protein (VIMSS) | compare |
| b3390 | aroK | -0.7 | -1.8 | shikimate kinase I (NCBI) | compare |
| b0014 | dnaK | -0.7 | -2.4 | molecular chaperone DnaK (NCBI) | compare |
| b1677 | lpp | -0.7 | -1.8 | murein lipoprotein (NCBI) | compare |
| b0688 | pgm | -0.7 | -2.5 | phosphoglucomutase (NCBI) | compare |
| b2576 | srmB | -0.7 | -2.6 | ATP-dependent RNA helicase (NCBI) | compare |
| b0948 | ycbY | -0.7 | -4.1 | predicted methyltransferase (NCBI) | compare |
| b2450 | yffS | -0.7 | -2.7 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4436 | ryeC | -0.7 | -1.1 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b3811 | xerC | -0.7 | -0.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2528 | iscA | -0.7 | -1.0 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0167 | glnD | -0.7 | -3.5 | PII uridylyl-transferase (NCBI) | compare |
| b4647 | mokA | -0.7 | -1.0 | no description | compare |
| b1231 | tyrT | -0.7 | -1.1 | tRNA-Tyr (NCBI) | compare |
| b4066 | yjcF | -0.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b1486 | ddpB | -0.7 | -2.3 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b3405 | ompR | -0.7 | -3.1 | osmolarity response regulator (NCBI) | compare |
| b1123 | potD | -0.7 | -3.3 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b1125 | potB | -0.6 | -3.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2297 | pta | -0.6 | -0.4 | phosphate acetyltransferase (NCBI) | compare |
| b2894 | xerD | -0.6 | -0.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3621 | rfaC | -0.6 | -3.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0088 | murD | -0.6 | -2.5 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1593 | b1593 | -0.6 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1482 | osmC | -0.6 | -1.4 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3620 | rfaF | -0.6 | -3.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3619 | rfaD | -0.6 | -2.4 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3162 | deaD | -0.6 | -3.0 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1290 | sapF | -0.6 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4545 | ypdJ | -0.6 | -2.1 | no description | compare |
| b3052 | rfaE | -0.6 | -3.1 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0237 | pepD | -0.6 | -4.0 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b1685 | ydiH | -0.6 | -1.4 | predicted protein (RefSeq) | compare |
| b4375 | prfC | -0.6 | -1.8 | peptide chain release factor 3 (NCBI) | compare |
| b1147 | ymfL | -0.6 | -1.9 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1292 | sapC | -0.6 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3761 | trpT | -0.6 | -1.5 | tRNA-Trp (NCBI) | compare |
| b0729 | sucD | -0.6 | -2.2 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b4493 | gapC | -0.5 | -1.5 | no description | compare |
| b1236 | galU | -0.5 | -2.3 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4589 | ylcI | -0.5 | -1.9 | hypothetical protein (RefSeq) | compare |
| b2343 | b2343 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0053 | surA | -0.5 | -3.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0685 | ybfE | -0.5 | -2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1524 | yneH | -0.5 | -0.7 | predicted glutaminase (NCBI) | compare |
| b3916 | pfkA | -0.5 | -1.8 | 6-phosphofructokinase (NCBI) | compare |
| b0234 | yafP | -0.5 | -1.2 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b1862 | yebB | -0.5 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b4177 | purA | -0.5 | -1.3 | adenylosuccinate synthetase (NCBI) | compare |
| b3612 | gpmI | -0.5 | -4.7 | phosphoglyceromutase (NCBI) | compare |
| b1088 | yceD | -0.5 | -2.5 | hypothetical protein (NCBI) | compare |
| b1659 | ydhB | -0.5 | -2.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2299 | yfcD | -0.5 | -2.7 | predicted NUDIX hydrolase (NCBI) | compare |
| b1108 | ycfP | -0.5 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1804 | rnd | -0.5 | -2.3 | ribonuclease D (NCBI) | compare |
| b4585 | sroB | -0.5 | -1.0 | Novel sRNA, function unknown (RefSeq) | compare |
| b1589 | ynfG | -0.5 | -1.8 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b1258 | yciF | -0.5 | -0.4 | hypothetical protein (NCBI) | compare |
| b0740 | tolB | -0.5 | -1.3 | translocation protein TolB precursor (NCBI) | compare |
| b1279 | yciS | -0.5 | -0.9 | conserved inner membrane protein (NCBI) | compare |
| b2501 | ppk | -0.5 | -3.5 | polyphosphate kinase (NCBI) | compare |
| b4593 | ymgI | -0.5 | -0.6 | hypothetical protein (RefSeq) | compare |
| b1613 | manA | -0.5 | -1.4 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b0741 | pal | -0.5 | -1.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1675 | ydhZ | -0.5 | -2.3 | hypothetical protein (NCBI) | compare |
| b1238 | tdk | -0.5 | -2.8 | thymidine kinase (NCBI) | compare |
| b1778 | yeaA | -0.5 | -1.1 | methionine sulfoxide reductase B (NCBI) | compare |
| b2479 | gcvR | -0.5 | -3.0 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b0767 | ybhE | -0.5 | -2.5 | 6-phosphogluconolactonase (NCBI) | compare |
| b3609 | secB | -0.5 | -2.7 | export protein SecB (NCBI) | compare |
| b3002 | yqhA | -0.4 | -1.1 | hypothetical protein (NCBI) | compare |
| b1271 | yciK | -0.4 | -1.6 | short chain dehydrogenase (NCBI) | compare |
| b2531 | iscR | -0.4 | -1.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3741 | gidA | -0.4 | -1.5 | glucose-inhibited division protein A (NCBI) | compare |
| b3204 | ptsN | -0.4 | -2.4 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b3728 | pstS | -0.4 | -2.1 | phosphate transporter subunit (NCBI) | compare |
| b4402 | yjjY | -0.4 | -0.5 | hypothetical protein (NCBI) | compare |
| b4435 | isrC | -0.4 | -1.5 | unknown RNA (NCBI) | compare |
| b1735 | chbR | -0.4 | -1.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1861 | ruvA | -0.4 | -0.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3842 | rfaH | -0.4 | -2.4 | transcriptional activator RfaH (NCBI) | compare |
| b0890 | ftsK | -0.4 | -1.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3493 | pitA | -0.4 | -2.9 | phosphate transporter, low-affinity (NCBI) | compare |
| b1522 | yneF | -0.4 | -1.7 | predicted diguanylate cyclase (NCBI) | compare |
| b3026 | qseC | -0.4 | -1.5 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0783 | moaC | -0.4 | -2.2 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b0937 | ssuE | -0.4 | -0.9 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b0975 | hyaD | -0.4 | -2.5 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b0226 | dinJ | -0.4 | -1.3 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3616 | tdh | -0.4 | -2.7 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b1291 | sapD | -0.4 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3149 | yraO | -0.4 | -2.4 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b2047 | wcaJ | -0.4 | -2.1 | predicted UDP-glucose lipid carrier transferase (NCBI) | compare |
| b2704 | srlB | -0.4 | -1.7 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1518 | lsrG | -0.4 | -1.0 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b0097 | yacA | -0.4 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2652 | ileY | -0.4 | -0.5 | tRNA-Ile (NCBI) | compare |
| b0303 | ykgI | -0.4 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1754 | b1754 | -0.4 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1438 | ydcQ | -0.4 | -2.1 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0737 | tolQ | -0.4 | -0.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2114 | metG | -0.4 | -1.5 | methionyl-tRNA synthetase (NCBI) | compare |
| b3617 | kbl | -0.4 | -2.8 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b0357 | yaiN | -0.4 | -1.0 | putative alpha helix chain (VIMSS) | compare |
| b2318 | truA | -0.4 | -1.3 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1931 | yedK | -0.4 | -2.5 | hypothetical protein (NCBI) | compare |
| b0999 | cbpM | -0.4 | -1.4 | modulator of CbpA co-chaperone (NCBI) | compare |
| b1539 | ydfG | -0.4 | -2.2 | L-allo-threonine dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b2646 | ypjF | -0.4 | -0.9 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b4025 | pgi | -0.4 | -2.9 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1605 | ydgI | -0.4 | -2.7 | predicted arginine/ornithine antiporter transporter (NCBI) | compare |
| b3600 | mtlD | -0.4 | -2.9 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b1726 | yniB | -0.4 | -1.3 | predicted inner membrane protein (NCBI) | compare |
| b3839 | tatC | -0.4 | -2.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0881 | clpS | -0.4 | -1.2 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b4699 | fnrS | -0.4 | -0.4 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b0118 | acnB | -0.4 | -0.5 | aconitate hydratase (NCBI) | compare |
| b3163 | nlpI | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| b2024 | hisA | -0.4 | -1.6 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b2259 | pmrD | -0.4 | -0.7 | polymyxin resistance protein B (VIMSS) | compare |
| b0338 | cynR | -0.4 | -2.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0976 | hyaE | -0.4 | -2.2 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b1196 | ycgY | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b1540 | ydfH | -0.4 | -1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1594 | dgsA | -0.4 | -1.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1503 | ydeR | -0.4 | -1.4 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4578 | insP | -0.4 | -1.4 | no description | compare |
| b0603 | ybdO | -0.4 | -0.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2698 | recX | -0.3 | -1.2 | RecA regulator RecX (NCBI) | compare |
| b1953 | b1953 | -0.3 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2285 | nuoE | -0.3 | -1.4 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1159 | mcrA | -0.3 | -0.6 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b2990 | hybG | -0.3 | -1.8 | hydrogenase 2 accessory protein (NCBI) | compare |
| b4702 | mgtL | -0.3 | -1.2 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0564 | appY | -0.3 | -0.5 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1004 | wrbA | -0.3 | -1.7 | TrpR binding protein WrbA (NCBI) | compare |
| b1837 | yebW | -0.3 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1488 | ddpX | -0.3 | -2.0 | D-ala-D-ala dipeptidase, Zn-dependent (NCBI) | compare |
| b0938 | ycbQ | -0.3 | -2.4 | putative fimbrial-like protein (VIMSS) | compare |
| b0705 | ybfL | -0.3 | -0.2 | putative receptor protein (VIMSS) | compare |
| b2038 | rfbC | -0.3 | -2.5 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b1628 | rsxB | -0.3 | -1.5 | electron transport complex protein RnfB (NCBI) | compare |
| b1617 | uidA | -0.3 | -2.1 | beta-D-glucuronidase (NCBI) | compare |
| b0560 | nohB | -0.3 | -1.2 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b4462 | ygaQ | -0.3 | -0.9 | hypothetical protein (RefSeq) | compare |
| b1160 | elbA | -0.3 | -0.4 | hypothetical protein (NCBI) | compare |
| b0728 | sucC | -0.3 | -2.1 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2953 | yggU | -0.3 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1860 | ruvB | -0.3 | -0.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b1712 | ihfA | -0.3 | -0.3 | integration host factor subunit alpha (NCBI) | compare |
| b1689 | b1689 | -0.3 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1640 | ydhH | -0.3 | -1.7 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b3497 | yhiQ | -0.3 | -2.4 | predicted SAM-dependent methyltransferase (NCBI) | compare |
| b4224 | chpS | -0.3 | -2.2 | suppressor of inhibitory function of ChpB, PemI-like, autoregulated (VIMSS) | compare |
| b1612 | fumA | -0.3 | -1.8 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b1302 | puuE | -0.3 | -1.6 | GABA aminotransferase, PLP-dependent (NCBI) | compare |