| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -4.5 | -16.7 | alanine racemase (NCBI) | compare |
| b4237 | nrdG | -4.4 | -10.9 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -3.9 | -16.8 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -3.3 | -6.0 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b0386 | proC | -3.0 | -6.2 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2912 | ygfA | -2.2 | -3.5 | putative ligase (VIMSS) | compare |
| b0949 | uup | -2.0 | -11.5 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4535 | yniD | -1.8 | -2.2 | predicted protein (RefSeq) | compare |
| b1334 | fnr | -1.7 | -2.0 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0200 | gmhB | -1.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b1429 | tehA | -1.3 | -1.8 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0243 | proA | -1.3 | -9.0 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b3035 | tolC | -1.3 | -5.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b2830 | nudH | -1.3 | -1.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1850 | eda | -1.2 | -2.7 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1860 | ruvB | -1.2 | -1.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b0049 | apaH | -1.2 | -2.6 | diadenosinetetraphosphatase (NCBI) | compare |
| b0902 | pflA | -1.2 | -4.8 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0242 | proB | -1.1 | -6.9 | gamma-glutamyl kinase (NCBI) | compare |
| b2168 | fruK | -1.1 | -1.5 | 1-phosphofructokinase (NCBI) | compare |
| b2846 | yqeH | -1.1 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1346 | ydaQ | -1.0 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b0142 | folK | -1.0 | -0.9 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b1863 | ruvC | -1.0 | -1.3 | Holliday junction resolvase (NCBI) | compare |
| b3162 | deaD | -1.0 | -4.6 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b2450 | yffS | -0.9 | -3.0 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4402 | yjjY | -0.9 | -1.2 | hypothetical protein (NCBI) | compare |
| b1677 | lpp | -0.9 | -2.2 | murein lipoprotein (NCBI) | compare |
| b4647 | mokA | -0.8 | -1.2 | no description | compare |
| b0903 | pflB | -0.8 | -6.1 | pyruvate formate lyase I (NCBI) | compare |
| b3229 | sspA | -0.8 | -2.2 | stringent starvation protein A (NCBI) | compare |
| b1290 | sapF | -0.8 | -1.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0741 | pal | -0.8 | -2.5 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0739 | tolA | -0.7 | -1.7 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1765 | ydjA | -0.7 | -0.8 | predicted oxidoreductase (NCBI) | compare |
| b4593 | ymgI | -0.7 | -0.9 | hypothetical protein (RefSeq) | compare |
| b3839 | tatC | -0.7 | -4.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b4503 | yafF | -0.7 | -1.0 | no description | compare |
| b2318 | truA | -0.7 | -2.4 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1292 | sapC | -0.7 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3052 | rfaE | -0.7 | -3.5 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1126 | potA | -0.7 | -4.3 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b0948 | ycbY | -0.7 | -4.2 | predicted methyltransferase (NCBI) | compare |
| b0053 | surA | -0.7 | -4.0 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3405 | ompR | -0.7 | -3.1 | osmolarity response regulator (NCBI) | compare |
| b1286 | rnb | -0.6 | -1.7 | exoribonuclease II (NCBI) | compare |
| b4171 | miaA | -0.6 | -2.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1882 | cheY | -0.6 | -0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0014 | dnaK | -0.6 | -1.8 | molecular chaperone DnaK (NCBI) | compare |
| b1360 | ydaV | -0.6 | -1.8 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b3794 | rffM | -0.6 | -4.3 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3761 | trpT | -0.6 | -1.8 | tRNA-Trp (NCBI) | compare |
| b1642 | slyA | -0.6 | -1.7 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b3792 | wzxE | -0.6 | -4.2 | O-antigen translocase (NCBI) | compare |
| b2259 | pmrD | -0.6 | -1.2 | polymyxin resistance protein B (VIMSS) | compare |
| b3916 | pfkA | -0.6 | -2.1 | 6-phosphofructokinase (NCBI) | compare |
| b3500 | gor | -0.6 | -1.6 | glutathione reductase (NCBI) | compare |
| b4048 | yjbM | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| b1124 | potC | -0.6 | -3.4 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1522 | yneF | -0.6 | -2.0 | predicted diguanylate cyclase (NCBI) | compare |
| b0303 | ykgI | -0.6 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2501 | ppk | -0.6 | -3.9 | polyphosphate kinase (NCBI) | compare |
| b1593 | b1593 | -0.6 | -2.7 | orf, hypothetical protein (VIMSS) | compare |
| b1438 | ydcQ | -0.6 | -2.9 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4414 | tff | -0.5 | -2.3 | unknown RNA (NCBI) | compare |
| b2498 | upp | -0.5 | -1.6 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0564 | appY | -0.5 | -1.1 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3164 | pnp | -0.5 | -2.3 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0232 | yafN | -0.5 | -0.7 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b1862 | yebB | -0.5 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1123 | potD | -0.5 | -3.0 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b2325 | yfcL | -0.5 | -2.5 | hypothetical protein (NCBI) | compare |
| b0688 | pgm | -0.5 | -1.8 | phosphoglucomutase (NCBI) | compare |
| b0471 | ybaB | -0.5 | -2.3 | hypothetical protein (NCBI) | compare |
| b2911 | ssrS | -0.5 | -1.5 | 6S regulatory RNA (NCBI) | compare |
| b1088 | yceD | -0.5 | -2.4 | hypothetical protein (NCBI) | compare |
| b2704 | srlB | -0.5 | -2.3 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1921 | fliZ | -0.5 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1104 | ycfL | -0.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b3935 | priA | -0.5 | -1.4 | primosome assembly protein PriA (NCBI) | compare |
| b0683 | fur | -0.5 | -1.0 | ferric uptake regulator (NCBI) | compare |
| b1150 | ymfR | -0.5 | -0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b4202 | rpsR | -0.5 | -1.2 | 30S ribosomal protein S18 (NCBI) | compare |
| b3781 | trxA | -0.5 | -2.7 | thioredoxin 1 (VIMSS) | compare |
| b3791 | rffA | -0.5 | -3.7 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3493 | pitA | -0.5 | -3.5 | phosphate transporter, low-affinity (NCBI) | compare |
| b2576 | srmB | -0.5 | -1.7 | ATP-dependent RNA helicase (NCBI) | compare |
| b0167 | glnD | -0.5 | -2.2 | PII uridylyl-transferase (NCBI) | compare |
| b1992 | cobS | -0.5 | -1.2 | cobalamin synthase (NCBI) | compare |
| b2659 | b2659 | -0.5 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3390 | aroK | -0.5 | -1.4 | shikimate kinase I (NCBI) | compare |
| b3619 | rfaD | -0.5 | -2.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b1984 | asnW | -0.5 | -0.8 | tRNA-Asn (NCBI) | compare |
| b3600 | mtlD | -0.5 | -3.4 | mannitol-1-phosphate 5-dehydrogenase (NCBI) | compare |
| b2330 | yfcB | -0.5 | -0.6 | putative adenine-specific methylase (VIMSS) | compare |
| b2642 | yfjW | -0.4 | -0.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2528 | iscA | -0.4 | -0.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b2297 | pta | -0.4 | -0.3 | phosphate acetyltransferase (NCBI) | compare |
| b1846 | yebE | -0.4 | -2.4 | hypothetical protein (NCBI) | compare |
| b1160 | elbA | -0.4 | -0.5 | hypothetical protein (NCBI) | compare |
| b0118 | acnB | -0.4 | -0.4 | aconitate hydratase (NCBI) | compare |
| b1066 | rimJ | -0.4 | -3.3 | ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) | compare |
| b4436 | ryeC | -0.4 | -0.7 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b1685 | ydiH | -0.4 | -1.1 | predicted protein (RefSeq) | compare |
| b2424 | cysU | -0.4 | -2.0 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b4375 | prfC | -0.4 | -1.5 | peptide chain release factor 3 (NCBI) | compare |
| b1187 | fadR | -0.4 | -1.9 | fatty acid metabolism regulator (NCBI) | compare |
| b3620 | rfaF | -0.4 | -2.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3261 | fis | -0.4 | -0.5 | DNA-binding protein Fis (NCBI) | compare |
| b1926 | fliT | -0.4 | -1.5 | predicted chaperone (NCBI) | compare |
| b4545 | ypdJ | -0.4 | -1.1 | no description | compare |
| b1370 | insH-5 | -0.4 | -1.5 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b1291 | sapD | -0.4 | -0.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1358 | ydaT | -0.4 | -0.6 | Rac prophage; predicted protein (NCBI) | compare |
| b1778 | yeaA | -0.4 | -1.4 | methionine sulfoxide reductase B (NCBI) | compare |
| b0222 | lpcA | -0.4 | -1.1 | phosphoheptose isomerase (NCBI) | compare |
| b4493 | gapC | -0.4 | -1.4 | no description | compare |
| b1855 | lpxM | -0.4 | -1.5 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1613 | manA | -0.4 | -1.1 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b4655 | ythA | -0.4 | -0.7 | expressed protein (RefSeq) | compare |
| b3868 | glnG | -0.4 | -2.9 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b0990 | cspG | -0.4 | -0.8 | DNA-binding transcriptional regulator (NCBI) | compare |
| b0247 | ykfG | -0.4 | -1.0 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b0975 | hyaD | -0.4 | -1.9 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b4066 | yjcF | -0.4 | -0.5 | hypothetical protein (NCBI) | compare |
| b1125 | potB | -0.4 | -1.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3930 | menA | -0.4 | -3.5 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b1271 | yciK | -0.4 | -1.2 | short chain dehydrogenase (NCBI) | compare |
| b2021 | hisC | -0.4 | -2.4 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b3204 | ptsN | -0.4 | -2.1 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b1679 | sufE | -0.4 | -1.1 | cysteine desufuration protein SufE (NCBI) | compare |
| b1563 | relE | -0.4 | -1.1 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b1675 | ydhZ | -0.4 | -2.3 | hypothetical protein (NCBI) | compare |
| b3002 | yqhA | -0.4 | -1.0 | hypothetical protein (NCBI) | compare |
| b0912 | ihfB | -0.4 | -0.9 | integration host factor subunit beta (NCBI) | compare |
| b2569 | lepA | -0.4 | -1.7 | GTP-binding protein LepA (NCBI) | compare |
| b1819 | manZ | -0.4 | -2.2 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b2111 | yehD | -0.4 | -1.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3728 | pstS | -0.4 | -1.9 | phosphate transporter subunit (NCBI) | compare |
| b1973 | yodA | -0.4 | -1.8 | conserved metal-binding protein (NCBI) | compare |
| b2741 | rpoS | -0.4 | -2.5 | RNA polymerase sigma factor (NCBI) | compare |
| b2207 | napD | -0.4 | -2.1 | assembly protein for periplasmic nitrate reductase (NCBI) | compare |
| b1343 | dbpA | -0.4 | -1.6 | ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) | compare |
| b1412 | azoR | -0.4 | -1.1 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b1861 | ruvA | -0.4 | -0.4 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1424 | mdoD | -0.4 | -2.1 | glucan biosynthesis protein, periplasmic (RefSeq) | compare |
| b3836 | b3836 | -0.4 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4589 | ylcI | -0.4 | -1.3 | hypothetical protein (RefSeq) | compare |
| b4407 | thiS | -0.4 | -0.9 | sulfur carrier protein ThiS (NCBI) | compare |
| b3119 | tdcR | -0.4 | -1.3 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b3627 | rfaI | -0.4 | -2.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b1171 | b1171 | -0.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1842 | holE | -0.3 | -0.9 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1818 | manY | -0.3 | -1.3 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b4194 | ulaB | -0.3 | -1.6 | L-ascorbate-specific enzyme IIB component of PTS (NCBI) | compare |
| b1235 | rssB | -0.3 | -2.1 | response regulator of RpoS (NCBI) | compare |
| b0610 | rnk | -0.3 | -1.8 | nucleoside diphosphate kinase regulator (NCBI) | compare |
| b1176 | minC | -0.3 | -0.8 | septum formation inhibitor (NCBI) | compare |
| b2093 | gatB | -0.3 | -2.1 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b2706 | gutM | -0.3 | -2.2 | DNA-binding transcriptional activator of glucitol operon (NCBI) | compare |
| b1970 | yedX | -0.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | -0.3 | -2.8 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b1667 | ydhR | -0.3 | -1.4 | hypothetical protein (NCBI) | compare |
| b3977 | tyrU | -0.3 | -0.5 | tRNA-Tyr (NCBI) | compare |
| b2299 | yfcD | -0.3 | -1.9 | predicted NUDIX hydrolase (NCBI) | compare |
| b0234 | yafP | -0.3 | -0.9 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4481 | rffT | -0.3 | -2.4 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b2156 | lysP | -0.3 | -2.7 | lysine transporter (NCBI) | compare |
| b0503 | ybbB | -0.3 | -1.9 | tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) | compare |
| b3082 | ygjM | -0.3 | -0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1594 | dgsA | -0.3 | -1.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3626 | rfaJ | -0.3 | -2.0 | UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase (NCBI) | compare |
| b1177 | ycgJ | -0.3 | -2.1 | hypothetical protein (NCBI) | compare |
| b2285 | nuoE | -0.3 | -1.2 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1777 | b1777 | -0.3 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0931 | pncB | -0.3 | -1.7 | nicotinate phosphoribosyltransferase (NCBI) | compare |
| b1012 | b1012 | -0.3 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1628 | rsxB | -0.3 | -1.1 | electron transport complex protein RnfB (NCBI) | compare |
| b1865 | nudB | -0.3 | -0.4 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1270 | btuR | -0.3 | -1.7 | cob(I)yrinic acid a,c-diamide adenosyltransferase (NCBI) | compare |
| b1196 | ycgY | -0.3 | -1.3 | hypothetical protein (NCBI) | compare |
| b3838 | tatB | -0.3 | -2.0 | sec-independent translocase (NCBI) | compare |
| b0226 | dinJ | -0.3 | -1.4 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b2288 | nuoA | -0.3 | -1.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1148 | ymfM | -0.3 | -1.3 | e14 prophage; predicted protein (NCBI) | compare |
| b0767 | ybhE | -0.3 | -1.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b4651 | yibW | -0.3 | -0.2 | no description | compare |
| b1441 | ydcT | -0.3 | -1.3 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b3784 | rfe | -0.3 | -2.6 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3163 | nlpI | -0.3 | -1.3 | hypothetical protein (NCBI) | compare |
| b3630 | rfaP | -0.3 | -2.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0655 | gltI | -0.3 | -2.0 | glutamate and aspartate transporter subunit (NCBI) | compare |
| b0881 | clpS | -0.3 | -0.9 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b0782 | moaB | -0.3 | -1.2 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b1464 | yddE | -0.3 | -1.5 | hypothetical protein (NCBI) | compare |
| b2123 | yehR | -0.3 | -1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2175 | spr | -0.3 | -1.4 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b0908 | aroA | -0.3 | -2.1 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b2007 | yeeX | -0.3 | -1.0 | conserved protein (RefSeq) | compare |
| b4012 | yjaB | -0.3 | -0.9 | predicted acetyltransferase (NCBI) | compare |