| | gene | name | fitness | t score | description | |
|---|
| b3979 | thrT | +1.8 | 0.7 | tRNA-Thr (NCBI) | compare |
| b2934 | cmtB | +1.5 | 1.3 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4676 | yoaK | +1.1 | 1.2 | expressed protein (RefSeq) | compare |
| b1161 | ycgX | +1.1 | 2.2 | hypothetical protein (NCBI) | compare |
| b1361 | ydaW | +1.1 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1936 | intG | +1.1 | 1.9 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0730 | mngR | +1.1 | 2.3 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1332 | ynaJ | +1.0 | 0.6 | predicted inner membrane protein (NCBI) | compare |
| b4538 | yoeF | +1.0 | 2.8 | hypothetical protein (RefSeq) | compare |
| b0630 | lipB | +0.9 | 1.6 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1351 | racC | +0.7 | 0.6 | Rac prophage; predicted protein (NCBI) | compare |
| b4640 | yoeG | +0.7 | 2.4 | no description | compare |
| b1363 | trkG | +0.7 | 0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1348 | lar | +0.7 | 1.7 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4505 | insX | +0.7 | 1.9 | predicted IS protein (RefSeq) | compare |
| b2071 | yegJ | +0.6 | 2.3 | hypothetical protein (NCBI) | compare |
| b2209 | eco | +0.6 | 1.4 | ecotin precursor (NCBI) | compare |
| b0310 | ykgH | +0.6 | 1.3 | predicted inner membrane protein (NCBI) | compare |
| b1409 | ynbB | +0.6 | 0.6 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b1545 | pinQ | +0.6 | 0.2 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1499 | ydeO | +0.6 | 0.3 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1576 | ydfD | +0.6 | 0.3 | Qin prophage; predicted protein (NCBI) | compare |
| b4653 | yicT | +0.6 | 1.8 | no description | compare |
| b2165 | yeiN | +0.5 | 2.9 | hypothetical protein (NCBI) | compare |
| b1497 | b1497 | +0.5 | 0.3 | putative enzyme (VIMSS) | compare |
| b0388 | aroL | +0.5 | 2.8 | shikimate kinase II (NCBI) | compare |
| b1258 | yciF | +0.5 | 0.7 | hypothetical protein (NCBI) | compare |
| b1919 | yedO | +0.5 | 1.3 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b4239 | treC | +0.4 | 0.8 | trehalose-6-P hydrolase (NCBI) | compare |
| b1195 | ymgE | +0.4 | 2.3 | predicted inner membrane protein (NCBI) | compare |
| b2051 | wcaH | +0.4 | 1.3 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b1848 | yebG | +0.4 | 1.2 | conserved protein regulated by LexA (NCBI) | compare |
| b4551 | yheV | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | +0.4 | 2.5 | orf, hypothetical protein (VIMSS) | compare |
| b1462 | b1462 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1558 | cspF | +0.4 | 1.6 | Qin prophage; cold shock protein (NCBI) | compare |
| b0535 | fimZ | +0.4 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4181 | yjfI | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b2859 | ygeO | +0.4 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1523 | yneG | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b2352 | yfdI | +0.4 | 0.7 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b4152 | frdC | +0.4 | 2.7 | fumarate reductase subunit C (NCBI) | compare |
| b0542 | renD | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0641 | rlpB | +0.4 | 2.0 | minor lipoprotein (NCBI) | compare |
| b3100 | yqjK | +0.4 | 2.4 | hypothetical protein (NCBI) | compare |
| b1257 | yciE | +0.4 | 0.2 | hypothetical protein (NCBI) | compare |
| b4596 | yciZ | +0.4 | 1.0 | hypothetical protein (RefSeq) | compare |
| b0802 | ybiJ | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b2699 | recA | +0.4 | 0.6 | recombinase A (NCBI) | compare |
| b1408 | b1408 | +0.4 | 2.1 | probable enzyme (VIMSS) | compare |
| b2017 | yefM | +0.4 | 0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1954 | dsrA | +0.4 | 1.5 | regulatory antisense RNA (NCBI) | compare |
| b2141 | yohJ | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b1753 | ynjA | +0.4 | 1.5 | hypothetical protein (NCBI) | compare |
| b2445 | yffN | +0.4 | 1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1427 | rimL | +0.4 | 1.6 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b1330 | ynaI | +0.4 | 2.0 | conserved inner membrane protein (NCBI) | compare |
| b4494 | arpB | +0.4 | 0.9 | no description | compare |
| b3512 | GadE | +0.3 | 2.2 | acid-responsive regulator of gadA and gadBC (Katherine Huang) | compare |
| b4573 | insZ | +0.3 | 1.9 | no description | compare |
| b1742 | b1742 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4445 | omrB | +0.3 | 2.1 | sRNA down regulates OM proteins; positively regulated by OmpR/EnvZ; binds Hfq (RefSeq) | compare |
| b3238 | yhcN | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0218 | yafU | +0.3 | 1.5 | predicted inner membrane protein (RefSeq) | compare |
| b1768 | ydjB | +0.3 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0803 | ybiI | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b0407 | yajC | +0.3 | 1.0 | preprotein translocase subunit YajC (NCBI) | compare |
| b4546 | ypeB | +0.3 | 0.7 | hypothetical protein (NCBI) | compare |
| b0933 | ssuB | +0.3 | 1.7 | alkanesulfonate transporter subunit (NCBI) | compare |
| b0696 | kdpC | +0.3 | 1.1 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b2853 | ygeI | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b0440 | hupB | +0.3 | 2.3 | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | compare |
| b1763 | topB | +0.3 | 2.2 | DNA topoisomerase III (NCBI) | compare |
| b1167 | ymgC | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b1165 | ymgA | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b2510 | b2510 | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1344 | ydaO | +0.3 | 1.2 | predicted C32 tRNA thiolase (NCBI) | compare |
| b0456 | ybaA | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b3443 | yrhA | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0846 | ybjK | +0.3 | 1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4497 | yeeL | +0.3 | 0.5 | no description | compare |
| b1566 | flxA | +0.3 | 1.4 | Qin prophage; predicted protein (NCBI) | compare |
| b4646 | yrdE | +0.3 | 1.5 | no description | compare |
| b1506 | yneL | +0.3 | 0.6 | predicted transcriptional regulator (NCBI) | compare |
| b0798 | ybiA | +0.3 | 0.6 | hypothetical protein (NCBI) | compare |
| b1038 | csgF | +0.3 | 1.3 | predicted transport protein (NCBI) | compare |
| b1969 | yedW | +0.3 | 1.7 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b0645 | ybeR | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b1407 | ydbD | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3361 | fic | +0.3 | 1.4 | stationary-phase protein, cell division (NCBI) | compare |
| b4509 | ylcG | +0.3 | 1.2 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2212 | alkB | +0.3 | 1.4 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) | compare |
| b2444 | yffM | +0.3 | 0.9 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b4157 | yjeN | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b4441 | glmY | +0.3 | 0.9 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b3120 | yhaB | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2577 | yfiE | +0.3 | 1.9 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b0738 | tolR | +0.3 | 0.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1698 | ydiR | +0.3 | 1.5 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b3037 | ygiB | +0.3 | 1.6 | conserved outer membrane protein (RefSeq) | compare |
| b1536 | ydeI | +0.3 | 0.4 | hypothetical protein (NCBI) | compare |
| b1557 | cspB | +0.3 | 0.7 | Qin prophage; cold shock protein (NCBI) | compare |
| b1130 | phoP | +0.3 | 0.5 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b1205 | ychH | +0.3 | 0.6 | predicted inner membrane protein (NCBI) | compare |
| b1519 | tam | +0.3 | 1.3 | trans-aconitate 2-methyltransferase (NCBI) | compare |
| b0228 | yafM | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b1858 | znuC | +0.3 | 1.9 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b1696 | ydiP | +0.3 | 1.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1143 | ymfI | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1259 | yciG | +0.3 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2456 | cchB | +0.3 | 1.5 | predicted carboxysome structural protein, ethanolamine utilization protein (NCBI) | compare |
| b4579 | yaiX | +0.3 | 1.8 | no description | compare |
| b4656 | yjhY | +0.3 | 2.0 | no description | compare |
| b2202 | napC | +0.3 | 1.8 | nitrate reductase, cytochrome c-type, periplasmic (NCBI) | compare |
| b1217 | chaB | +0.3 | 0.6 | cation transport regulator (NCBI) | compare |
| b1883 | cheB | +0.3 | 1.4 | chemotaxis-specific methylesterase (NCBI) | compare |
| b1044 | ymdA | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1138 | ymfE | +0.3 | 0.7 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b4631 | ykgQ | +0.3 | 1.0 | no description | compare |
| b2587 | kgtP | +0.3 | 1.7 | alpha-ketoglutarate transporter (NCBI) | compare |
| b0864 | artP | +0.3 | 1.4 | arginine transporter subunit (NCBI) | compare |
| b1362 | rzpR | +0.3 | 1.0 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b0623 | cspE | +0.3 | 0.7 | cold shock protein E (NCBI) | compare |
| b3775 | ppiC | +0.3 | 1.1 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b1847 | yebF | +0.3 | 0.5 | predicted protein (RefSeq) | compare |
| b3125 | garR | +0.3 | 1.8 | tartronate semialdehyde reductase (RefSeq) | compare |
| b1025 | ycdT | +0.3 | 0.6 | predicted diguanylate cyclase (NCBI) | compare |
| b4277 | yjgZ | +0.3 | 1.6 | KpLE2 phage-like element; predicted protein (NCBI) | compare |
| b1113 | ycfS | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b1013 | ycdC | +0.3 | 0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0946 | ycbW | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1831 | proQ | +0.3 | 1.1 | putative solute/DNA competence effector (NCBI) | compare |
| b2134 | pbpG | +0.3 | 1.7 | penicillin-binding protein 7 (VIMSS) | compare |
| b1309 | ycjM | +0.3 | 1.4 | putative polysaccharide hydrolase (VIMSS) | compare |
| b0998 | torD | +0.3 | 0.5 | chaperone protein TorD (NCBI) | compare |
| b0606 | ahpF | +0.2 | 1.8 | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | compare |
| b1581 | rspA | +0.2 | 1.1 | predicted dehydratase (NCBI) | compare |
| b1337 | abgB | +0.2 | 1.3 | predicted peptidase, aminobenzoyl-glutamate utilization protein (NCBI) | compare |
| b2287 | nuoB | +0.2 | 1.3 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0726 | sucA | +0.2 | 1.3 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2208 | napF | +0.2 | 1.2 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) | compare |
| b1308 | pspE | +0.2 | 1.2 | thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) | compare |
| b4394 | yjjX | +0.2 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0547 | ybcN | +0.2 | 1.5 | DLP12 prophage; predicted protein (NCBI) | compare |
| b0714 | nei | +0.2 | 1.1 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b1162 | ycgE | +0.2 | 1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3962 | udhA | +0.2 | 1.9 | putative oxidoreductase (VIMSS) | compare |
| b2561 | yfhH | +0.2 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1672 | ydhW | +0.2 | 1.0 | hypothetical protein (NCBI) | compare |
| b1276 | acnA | +0.2 | 1.7 | aconitate hydratase (NCBI) | compare |
| b1520 | b1520 | +0.2 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1139 | lit | +0.2 | 1.4 | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression (NCBI) | compare |
| b3555 | yiaG | +0.2 | 1.4 | predicted transcriptional regulator (NCBI) | compare |
| b2355 | yfdL | +0.2 | 2.1 | CPS-53 (KpLE1) prophage; conserved protein (RefSeq) | compare |
| b4363 | yjjB | +0.2 | 1.2 | conserved inner membrane protein (RefSeq) | compare |
| b1693 | aroD | +0.2 | 1.1 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1450 | b1450 | +0.2 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1434 | ydcN | +0.2 | 0.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1134 | ymfB | +0.2 | 0.7 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b1251 | yciI | +0.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0411 | tsx | +0.2 | 1.8 | nucleoside channel, receptor of phage T6 and colicin K (NCBI) | compare |
| b0611 | rna | +0.2 | 1.6 | ribonuclease I (NCBI) | compare |
| b0102 | yacF | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b0192 | nlpE | +0.2 | 1.7 | lipoprotein involved with copper homeostasis and adhesion (NCBI) | compare |
| b0225 | yafQ | +0.2 | 1.0 | predicted toxin of the YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b0942 | ycbU | +0.2 | 1.3 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1884 | cheR | +0.2 | 1.3 | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | compare |
| b1058 | yceO | +0.2 | 0.1 | hypothetical protein (NCBI) | compare |
| b3973 | birA | +0.2 | 1.1 | biotin--protein ligase (NCBI) | compare |
| b0439 | lon | +0.2 | 1.0 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1357 | ydaS | +0.2 | 0.8 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1707 | ydiV | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b0443 | ybaW | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b1168 | b1168 | +0.2 | 1.1 | putative proteases (VIMSS) | compare |
| b4634 | ylcF | +0.2 | 1.7 | no description | compare |
| b2486 | hyfF | +0.2 | 1.4 | NADH dehydrogenase subunit N (NCBI) | compare |
| b2804 | fucU | +0.2 | 1.1 | L-fucose mutarotase (NCBI) | compare |
| b2843 | kduI | +0.2 | 1.6 | 5-keto-4-deoxyuronate isomerase (NCBI) | compare |
| b1734 | chbF | +0.2 | 1.5 | cryptic phospho-beta-glucosidase, NAD(P)-binding (NCBI) | compare |
| b3270 | yhdY | +0.2 | 1.8 | putative transport system permease protein (VIMSS) | compare |
| b1948 | fliP | +0.2 | 1.2 | flagellar biosynthesis protein P (NCBI) | compare |
| b2481 | hyfA | +0.2 | 1.4 | hydrogenase 4 Fe-S subunit (VIMSS) | compare |
| b4513 | kdpF | +0.2 | 0.9 | potassium ion accessory transporter subunit (NCBI) | compare |
| b1691 | ydiN | +0.2 | 1.0 | predicted transporter (RefSeq) | compare |
| b2622 | intA | +0.2 | 1.5 | CP4-57 prophage; integrase (NCBI) | compare |
| b1156 | tfaE | +0.2 | 1.3 | e14 prophage; predicted tail fiber assembly protein (NCBI) | compare |
| b4595 | yciY | +0.2 | 0.8 | hypothetical protein (RefSeq) | compare |
| b4464 | ygfQ | +0.2 | 1.6 | predicted transporter (NCBI) | compare |
| b1299 | puuR | +0.2 | 1.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0442 | ybaV | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b2058 | wcaB | +0.2 | 0.5 | predicted acyl transferase (NCBI) | compare |
| b1590 | ynfH | +0.2 | 1.1 | oxidoreductase, membrane subunit (NCBI) | compare |
| b1063 | yceB | +0.2 | 1.0 | predicted lipoprotein (NCBI) | compare |
| b1387 | maoC | +0.2 | 1.4 | fused aldehyde dehydrogenase/enoyl-CoA hydratase (NCBI) | compare |
| b1683 | ynhE | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2362 | yfdS | +0.2 | 0.8 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2635 | ypjK | +0.2 | 1.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0754 | aroG | +0.2 | 1.5 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) | compare |
| b4480 | hdfR | +0.2 | 1.3 | transcriptional regulator HdfR (NCBI) | compare |
| b1709 | btuD | +0.2 | 0.2 | vitamin B12-transporter ATPase (NCBI) | compare |