| | gene | name | fitness | t score | description | |
|---|
| b4053 | alr | -6.7 | -15.7 | alanine racemase (NCBI) | compare |
| b4237 | nrdG | -5.4 | -6.4 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -5.2 | -10.5 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4041 | plsB | -4.8 | -4.6 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b4025 | pgi | -3.2 | -13.4 | glucose-6-phosphate isomerase (NCBI) | compare |
| b1850 | eda | -2.8 | -4.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b1334 | fnr | -2.7 | -3.1 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b0386 | proC | -2.2 | -6.3 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0949 | uup | -2.1 | -12.5 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b0902 | pflA | -1.9 | -9.7 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0243 | proA | -1.8 | -12.0 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b0242 | proB | -1.7 | -8.5 | gamma-glutamyl kinase (NCBI) | compare |
| b1123 | potD | -1.6 | -7.9 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b4647 | mokA | -1.6 | -1.7 | no description | compare |
| b1860 | ruvB | -1.5 | -1.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b3916 | pfkA | -1.5 | -4.0 | 6-phosphofructokinase (NCBI) | compare |
| b3183 | obgE | -1.5 | -1.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2830 | nudH | -1.5 | -1.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1124 | potC | -1.4 | -8.5 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b2820 | recB | -1.4 | -0.9 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b1126 | potA | -1.4 | -9.0 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b4593 | ymgI | -1.4 | -1.7 | hypothetical protein (RefSeq) | compare |
| b0737 | tolQ | -1.4 | -2.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3930 | menA | -1.3 | -11.3 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b3390 | aroK | -1.2 | -2.4 | shikimate kinase I (NCBI) | compare |
| b1236 | galU | -1.2 | -4.8 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1125 | potB | -1.2 | -6.0 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b3229 | sspA | -1.2 | -2.6 | stringent starvation protein A (NCBI) | compare |
| b0903 | pflB | -1.1 | -8.0 | pyruvate formate lyase I (NCBI) | compare |
| b2330 | yfcB | -1.1 | -1.3 | putative adenine-specific methylase (VIMSS) | compare |
| b0688 | pgm | -1.1 | -3.6 | phosphoglucomutase (NCBI) | compare |
| b2329 | aroC | -1.1 | -6.1 | chorismate synthase (NCBI) | compare |
| b2620 | smpB | -1.1 | -1.4 | SsrA-binding protein (NCBI) | compare |
| b3781 | trxA | -1.1 | -4.7 | thioredoxin 1 (VIMSS) | compare |
| b4375 | prfC | -1.1 | -3.1 | peptide chain release factor 3 (NCBI) | compare |
| b4177 | purA | -1.1 | -2.0 | adenylosuccinate synthetase (NCBI) | compare |
| b2912 | ygfA | -1.0 | -2.2 | putative ligase (VIMSS) | compare |
| b0728 | sucC | -1.0 | -6.2 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1048 | mdoG | -1.0 | -5.9 | glucan biosynthesis protein, periplasmic (NCBI) | compare |
| b0014 | dnaK | -1.0 | -3.4 | molecular chaperone DnaK (NCBI) | compare |
| b2297 | pta | -1.0 | -0.6 | phosphate acetyltransferase (NCBI) | compare |
| b3868 | glnG | -1.0 | -5.9 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b2531 | iscR | -1.0 | -2.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0912 | ihfB | -1.0 | -2.3 | integration host factor subunit beta (NCBI) | compare |
| b0053 | surA | -1.0 | -5.6 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0739 | tolA | -1.0 | -2.1 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2659 | b2659 | -0.9 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1551 | b1551 | -0.9 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -0.9 | -2.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0908 | aroA | -0.9 | -6.2 | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | compare |
| b0729 | sucD | -0.9 | -4.2 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b0303 | ykgI | -0.9 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b3405 | ompR | -0.9 | -3.8 | osmolarity response regulator (NCBI) | compare |
| b3162 | deaD | -0.9 | -4.1 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1160 | elbA | -0.9 | -1.0 | hypothetical protein (NCBI) | compare |
| b2576 | srmB | -0.9 | -3.2 | ATP-dependent RNA helicase (NCBI) | compare |
| b4202 | rpsR | -0.9 | -1.7 | 30S ribosomal protein S18 (NCBI) | compare |
| b3706 | trmE | -0.9 | -3.1 | tRNA modification GTPase (NCBI) | compare |
| b3389 | aroB | -0.8 | -6.6 | 3-dehydroquinate synthase (NCBI) | compare |
| b3341 | rpsG | -0.8 | -1.3 | 30S ribosomal protein S7 (NCBI) | compare |
| b3281 | aroE | -0.8 | -7.5 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b3035 | tolC | -0.8 | -3.4 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b4676 | yoaK | -0.8 | -0.5 | expressed protein (RefSeq) | compare |
| b1049 | mdoH | -0.8 | -6.2 | glucosyltransferase MdoH (NCBI) | compare |
| b3806 | cyaA | -0.8 | -5.3 | adenylate cyclase (NCBI) | compare |
| b0738 | tolR | -0.8 | -1.3 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4535 | yniD | -0.8 | -1.3 | predicted protein (RefSeq) | compare |
| b2569 | lepA | -0.8 | -3.8 | GTP-binding protein LepA (NCBI) | compare |
| b2808 | gcvA | -0.8 | -3.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1192 | ldcA | -0.8 | -1.8 | L,D-carboxypeptidase A (NCBI) | compare |
| b0082 | mraW | -0.8 | -3.7 | S-adenosyl-methyltransferase (NCBI) | compare |
| b1293 | sapB | -0.8 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1853 | yebK | -0.8 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3977 | tyrU | -0.8 | -0.9 | tRNA-Tyr (NCBI) | compare |
| b2501 | ppk | -0.7 | -5.7 | polyphosphate kinase (NCBI) | compare |
| b1524 | yneH | -0.7 | -1.1 | predicted glutaminase (NCBI) | compare |
| b2699 | recA | -0.7 | -0.7 | recombinase A (NCBI) | compare |
| b0167 | glnD | -0.7 | -3.2 | PII uridylyl-transferase (NCBI) | compare |
| b2110 | yehC | -0.7 | -1.5 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b3493 | pitA | -0.7 | -4.9 | phosphate transporter, low-affinity (NCBI) | compare |
| b2168 | fruK | -0.7 | -0.8 | 1-phosphofructokinase (NCBI) | compare |
| b0603 | ybdO | -0.7 | -0.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0145 | dksA | -0.7 | -2.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b1159 | mcrA | -0.7 | -1.2 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b0740 | tolB | -0.7 | -2.0 | translocation protein TolB precursor (NCBI) | compare |
| b0237 | pepD | -0.7 | -5.2 | aminoacyl-histidine dipeptidase (peptidase D) (NCBI) | compare |
| b0118 | acnB | -0.7 | -0.5 | aconitate hydratase (NCBI) | compare |
| b1347 | ydaC | -0.7 | -0.4 | Rac prophage; predicted protein (NCBI) | compare |
| b1241 | adhE | -0.7 | -4.9 | fused acetaldehyde-CoA dehydrogenase/iron-dependent alcohol dehydrogenase/pyruvate-formate lyase deactivase (NCBI) | compare |
| b3164 | pnp | -0.7 | -2.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0741 | pal | -0.7 | -2.3 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4462 | ygaQ | -0.7 | -1.6 | hypothetical protein (RefSeq) | compare |
| b0142 | folK | -0.7 | -0.6 | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase (NCBI) | compare |
| b2846 | yqeH | -0.7 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b3620 | rfaF | -0.7 | -3.6 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2318 | truA | -0.7 | -1.8 | tRNA pseudouridine synthase A (NCBI) | compare |
| b1685 | ydiH | -0.7 | -1.7 | predicted protein (RefSeq) | compare |
| b1842 | holE | -0.7 | -2.5 | DNA polymerase III, theta subunit (NCBI) | compare |
| b1292 | sapC | -0.6 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0080 | fruR | -0.6 | -4.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3204 | ptsN | -0.6 | -2.9 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2343 | b2343 | -0.6 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2553 | glnB | -0.6 | -2.3 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b0500 | ybbD | -0.6 | -0.3 | hypothetical protein (RefSeq) | compare |
| b1536 | ydeI | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b2081 | yegQ | -0.6 | -4.7 | predicted peptidase (NCBI) | compare |
| b2479 | gcvR | -0.6 | -3.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b1730 | ydjO | -0.6 | -1.0 | predicted protein (RefSeq) | compare |
| b0580 | ybdJ | -0.6 | -2.4 | predicted inner membrane protein (NCBI) | compare |
| b0677 | nagA | -0.6 | -3.2 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b2017 | yefM | -0.6 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1088 | yceD | -0.6 | -3.1 | hypothetical protein (NCBI) | compare |
| b2625 | yfjI | -0.6 | -1.3 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b4201 | priB | -0.6 | -2.2 | primosomal replication protein N (NCBI) | compare |
| b3728 | pstS | -0.6 | -2.6 | phosphate transporter subunit (NCBI) | compare |
| b0549 | ybcO | -0.6 | -1.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1290 | sapF | -0.6 | -1.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0957 | ompA | -0.6 | -2.9 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2562 | yfhL | -0.5 | -4.5 | predicted 4Fe-4S cluster-containing protein (NCBI) | compare |
| b1550 | b1550 | -0.5 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4131 | cadA | -0.5 | -5.0 | lysine decarboxylase 1 (NCBI) | compare |
| b1253 | yciA | -0.5 | -2.1 | predicted hydrolase (NCBI) | compare |
| b1648 | b1648 | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0953 | rmf | -0.5 | -0.9 | ribosome modulation factor (NCBI) | compare |
| b3247 | cafA | -0.5 | -4.7 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b4592 | yccB | -0.5 | -1.6 | hypothetical protein (RefSeq) | compare |
| b2007 | yeeX | -0.5 | -2.1 | conserved protein (RefSeq) | compare |
| b3884 | yihW | -0.5 | -3.8 | putative DEOR-type transcriptional regulator (VIMSS) | compare |
| b2055 | wcaE | -0.5 | -0.3 | predicted glycosyl transferase (NCBI) | compare |
| b1863 | ruvC | -0.5 | -0.9 | Holliday junction resolvase (NCBI) | compare |
| b1613 | manA | -0.5 | -1.3 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b1171 | b1171 | -0.5 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b3649 | rpoZ | -0.5 | -2.4 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b2393 | nupC | -0.5 | -3.3 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b2288 | nuoA | -0.5 | -1.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1865 | nudB | -0.5 | -1.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1148 | ymfM | -0.5 | -1.9 | e14 prophage; predicted protein (NCBI) | compare |
| b1712 | ihfA | -0.5 | -0.6 | integration host factor subunit alpha (NCBI) | compare |
| b2319 | usg | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b1497 | b1497 | -0.5 | -0.3 | putative enzyme (VIMSS) | compare |
| b2894 | xerD | -0.5 | -0.5 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4179 | vacB | -0.5 | -3.2 | putative enzyme (VIMSS) | compare |
| b2024 | hisA | -0.5 | -1.7 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b1542 | ydfI | -0.5 | -2.8 | predicted mannonate dehydrogenase (NCBI) | compare |
| b2652 | ileY | -0.5 | -0.6 | tRNA-Ile (NCBI) | compare |
| b4443 | gcvB | -0.5 | -0.2 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b1804 | rnd | -0.5 | -2.3 | ribonuclease D (NCBI) | compare |
| b3778 | rep | -0.5 | -3.7 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1505 | ydeT | -0.5 | -0.9 | hypothetical protein (RefSeq) | compare |
| b4414 | tff | -0.5 | -1.4 | unknown RNA (NCBI) | compare |
| b4178 | yjeB | -0.5 | -3.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2939 | yqgB | -0.5 | -0.9 | predicted protein (RefSeq) | compare |
| b1627 | rsxA | -0.5 | -2.6 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b0051 | ksgA | -0.5 | -2.5 | dimethyladenosine transferase (NCBI) | compare |
| b4153 | frdB | -0.5 | -3.8 | fumarate reductase (anaerobic), Fe-S subunit (NCBI) | compare |
| b2704 | srlB | -0.5 | -1.9 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1001 | yccE | -0.5 | -0.2 | hypothetical protein (NCBI) | compare |
| b0357 | yaiN | -0.5 | -1.6 | putative alpha helix chain (VIMSS) | compare |
| b0437 | clpP | -0.5 | -2.7 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1258 | yciF | -0.5 | -0.6 | hypothetical protein (NCBI) | compare |
| b0890 | ftsK | -0.5 | -1.7 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3158 | yhbU | -0.5 | -3.8 | predicted peptidase (collagenase-like) (NCBI) | compare |
| b2853 | ygeI | -0.5 | -0.2 | hypothetical protein (NCBI) | compare |
| b2948 | yqgE | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4402 | yjjY | -0.4 | -0.5 | hypothetical protein (NCBI) | compare |
| b2911 | ssrS | -0.4 | -1.3 | 6S regulatory RNA (NCBI) | compare |
| b1593 | b1593 | -0.4 | -2.8 | orf, hypothetical protein (VIMSS) | compare |
| b4132 | cadB | -0.4 | -4.1 | predicted lysine/cadaverine transporter (NCBI) | compare |
| b4171 | miaA | -0.4 | -1.8 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1165 | ymgA | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b1167 | ymgC | -0.4 | -0.2 | hypothetical protein (NCBI) | compare |
| b2285 | nuoE | -0.4 | -1.3 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0450 | glnK | -0.4 | -1.3 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b3180 | yhbY | -0.4 | -2.7 | predicted RNA-binding protein (NCBI) | compare |
| b0149 | mrcB | -0.4 | -3.7 | penicillin-binding protein 1b (NCBI) | compare |
| b1754 | b1754 | -0.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3157 | yhbT | -0.4 | -2.6 | predicted lipid carrier protein (NCBI) | compare |
| b2784 | relA | -0.4 | -3.2 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b1346 | ydaQ | -0.4 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1563 | relE | -0.4 | -1.6 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b0746 | valZ | -0.4 | -1.6 | tRNA-Val (NCBI) | compare |
| b3159 | yhbV | -0.4 | -3.4 | orf, hypothetical protein (VIMSS) | compare |
| b4545 | ypdJ | -0.4 | -1.6 | no description | compare |
| b1493 | gadB | -0.4 | -0.7 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b0948 | ycbY | -0.4 | -2.6 | predicted methyltransferase (NCBI) | compare |
| b0975 | hyaD | -0.4 | -2.2 | protein involved in processing of HyaA and HyaB proteins (NCBI) | compare |
| b1412 | azoR | -0.4 | -2.1 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b3210 | arcB | -0.4 | -2.6 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b0990 | cspG | -0.4 | -0.7 | DNA-binding transcriptional regulator (NCBI) | compare |
| b1235 | rssB | -0.4 | -2.5 | response regulator of RpoS (NCBI) | compare |
| b1677 | lpp | -0.4 | -1.1 | murein lipoprotein (NCBI) | compare |
| b4451 | ryhB | -0.4 | -1.6 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b3612 | gpmI | -0.4 | -3.8 | phosphoglyceromutase (NCBI) | compare |
| b0234 | yafP | -0.4 | -1.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b0683 | fur | -0.4 | -0.9 | ferric uptake regulator (NCBI) | compare |
| b1576 | ydfD | -0.4 | -0.2 | Qin prophage; predicted protein (NCBI) | compare |
| b2847 | yqeI | -0.4 | -0.4 | predicted transcriptional regulator (NCBI) | compare |
| b1630 | rsxD | -0.4 | -2.1 | electron transport complex protein RnfD (NCBI) | compare |
| b1429 | tehA | -0.4 | -0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1739 | osmE | -0.4 | -1.2 | DNA-binding transcriptional activator (NCBI) | compare |