| | gene | name | fitness | t score | description | |
|---|
| b2934 | cmtB | +1.4 | 1.2 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0630 | lipB | +1.1 | 2.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1361 | ydaW | +1.1 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b4538 | yoeF | +0.9 | 2.7 | hypothetical protein (RefSeq) | compare |
| b1160 | elbA | +0.9 | 1.5 | hypothetical protein (NCBI) | compare |
| b1506 | yneL | +0.8 | 1.7 | predicted transcriptional regulator (NCBI) | compare |
| b4596 | yciZ | +0.7 | 1.7 | hypothetical protein (RefSeq) | compare |
| b4603 | rseX | +0.7 | 0.9 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1058 | yceO | +0.7 | 0.3 | hypothetical protein (NCBI) | compare |
| b1195 | ymgE | +0.7 | 2.6 | predicted inner membrane protein (NCBI) | compare |
| b0802 | ybiJ | +0.7 | 3.1 | hypothetical protein (NCBI) | compare |
| b1524 | yneH | +0.6 | 1.2 | predicted glutaminase (NCBI) | compare |
| b1936 | intG | +0.6 | 1.1 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b0880 | cspD | +0.6 | 2.3 | cold shock protein homolog (NCBI) | compare |
| b1183 | umuD | +0.6 | 2.2 | DNA polymerase V, subunit D (NCBI) | compare |
| b0798 | ybiA | +0.6 | 2.2 | hypothetical protein (NCBI) | compare |
| b1357 | ydaS | +0.5 | 1.7 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0843 | ybjH | +0.5 | 1.5 | hypothetical protein (NCBI) | compare |
| b1363 | trkG | +0.5 | 0.5 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4699 | fnrS | +0.5 | 0.8 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1257 | yciE | +0.5 | 0.3 | hypothetical protein (NCBI) | compare |
| b1882 | cheY | +0.5 | 0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b0145 | dksA | +0.5 | 1.5 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b4000 | hupA | +0.5 | 2.8 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b4410 | ecnA | +0.5 | 1.4 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b3027 | ygiZ | +0.5 | 0.3 | conserved inner membrane protein (NCBI) | compare |
| b1408 | b1408 | +0.5 | 2.7 | probable enzyme (VIMSS) | compare |
| b1954 | dsrA | +0.5 | 1.8 | regulatory antisense RNA (NCBI) | compare |
| b2071 | yegJ | +0.5 | 1.3 | hypothetical protein (NCBI) | compare |
| b1739 | osmE | +0.4 | 1.5 | DNA-binding transcriptional activator (NCBI) | compare |
| b1575 | dicB | +0.4 | 1.1 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b2209 | eco | +0.4 | 1.7 | ecotin precursor (NCBI) | compare |
| b4585 | sroB | +0.4 | 1.1 | Novel sRNA, function unknown (RefSeq) | compare |
| b3889 | yiiE | +0.4 | 1.8 | predicted transcriptional regulator (RefSeq) | compare |
| b1669 | ydhT | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b2650 | ypjC | +0.4 | 0.2 | hypothetical protein (RefSeq) | compare |
| b1150 | ymfR | +0.4 | 0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b4128 | yjdK | +0.4 | 0.4 | hypothetical protein (NCBI) | compare |
| b1961 | dcm | +0.4 | 1.3 | DNA cytosine methylase (NCBI) | compare |
| b0730 | mngR | +0.4 | 0.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4640 | yoeG | +0.4 | 1.3 | no description | compare |
| b1085 | b1085 | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2510 | b2510 | +0.4 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1742 | b1742 | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1138 | ymfE | +0.4 | 1.0 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b3624 | rfaZ | +0.4 | 1.5 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1407 | ydbD | +0.4 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4546 | ypeB | +0.4 | 0.8 | hypothetical protein (NCBI) | compare |
| b0521 | ybcF | +0.4 | 1.9 | predicted carbamate kinase (NCBI) | compare |
| b3207 | yrbL | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b0714 | nei | +0.4 | 2.0 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b1434 | ydcN | +0.4 | 0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4573 | insZ | +0.4 | 2.2 | no description | compare |
| b1572 | ydfB | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2935 | tktA | +0.3 | 0.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b4651 | yibW | +0.3 | 0.3 | no description | compare |
| b1348 | lar | +0.3 | 0.9 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b2399 | yfeD | +0.3 | 2.3 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0114 | aceE | +0.3 | 0.8 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0407 | yajC | +0.3 | 0.8 | preprotein translocase subunit YajC (NCBI) | compare |
| b2432 | yfeY | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b0310 | ykgH | +0.3 | 0.7 | predicted inner membrane protein (NCBI) | compare |
| b0632 | dacA | +0.3 | 2.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b4686 | yshB | +0.3 | 1.7 | expressed protein (RefSeq) | compare |
| b2356 | yfdM | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4042 | dgkA | +0.3 | 0.2 | diacylglycerol kinase (NCBI) | compare |
| b1258 | yciF | +0.3 | 0.5 | hypothetical protein (NCBI) | compare |
| b1490 | yddV | +0.3 | 1.9 | predicted diguanylate cyclase (RefSeq) | compare |
| b3623 | rfaK | +0.3 | 1.2 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1799 | yeaT | +0.3 | 1.7 | putative transcriptional regulator LYSR-type (VIMSS) | compare |
| b1729 | ydjN | +0.3 | 1.3 | predicted transporter (NCBI) | compare |
| b1205 | ychH | +0.3 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b1152 | ymfP | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2488 | hyfH | +0.3 | 1.6 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b3100 | yqjK | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b4642 | yoeD | +0.3 | 1.5 | no description | compare |
| b1426 | ydcH | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2200 | ccmB | +0.3 | 1.6 | heme exporter subunit (NCBI) | compare |
| b1999 | yeeP | +0.3 | 2.0 | putative histone (VIMSS) | compare |
| b1545 | pinQ | +0.3 | 0.1 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1165 | ymgA | +0.3 | 0.2 | hypothetical protein (NCBI) | compare |
| b0736 | ybgC | +0.3 | 1.1 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b3250 | mreC | +0.3 | 0.7 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b1576 | ydfD | +0.3 | 0.1 | Qin prophage; predicted protein (NCBI) | compare |
| b1499 | ydeO | +0.3 | 0.1 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b2181 | yejG | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b0889 | lrp | +0.3 | 1.0 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b1727 | yniC | +0.3 | 1.0 | predicted hydrolase (NCBI) | compare |
| b4660 | yhiL | +0.3 | 0.2 | no description | compare |
| b4598 | yncL | +0.3 | 1.1 | hypothetical protein (RefSeq) | compare |
| b1566 | flxA | +0.3 | 1.3 | Qin prophage; predicted protein (NCBI) | compare |
| b2419 | yfeK | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b0535 | fimZ | +0.3 | 1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3775 | ppiC | +0.3 | 1.4 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b1802 | yeaW | +0.3 | 1.6 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b0218 | yafU | +0.3 | 1.0 | predicted inner membrane protein (RefSeq) | compare |
| b4158 | yjeO | +0.3 | 1.9 | conserved inner membrane protein (NCBI) | compare |
| b2782 | chpA | +0.3 | 1.9 | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease (NCBI) | compare |
| b2587 | kgtP | +0.3 | 1.7 | alpha-ketoglutarate transporter (NCBI) | compare |
| b1276 | acnA | +0.3 | 2.0 | aconitate hydratase (NCBI) | compare |
| b1667 | ydhR | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b1175 | minD | +0.3 | 1.6 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1176 | minC | +0.3 | 0.9 | septum formation inhibitor (NCBI) | compare |
| b4104 | phnE | +0.3 | 1.2 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b4505 | insX | +0.3 | 0.7 | predicted IS protein (RefSeq) | compare |
| b3863 | polA | +0.3 | 0.4 | DNA polymerase I (NCBI) | compare |
| b2930 | yggF | +0.3 | 1.8 | predicted hexoseP phosphatase (NCBI) | compare |
| b1691 | ydiN | +0.3 | 1.2 | predicted transporter (RefSeq) | compare |
| b2293 | yfbT | +0.3 | 1.5 | putative phosphatase (VIMSS) | compare |
| b4045 | yjbJ | +0.3 | 1.1 | predicted stress response protein (NCBI) | compare |
| b2617 | smpA | +0.3 | 1.5 | small membrane protein A (VIMSS) | compare |
| b0946 | ycbW | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1251 | yciI | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0934 | ycbM | +0.3 | 1.3 | putative transport system permease protein (VIMSS) | compare |
| b2058 | wcaB | +0.3 | 0.6 | predicted acyl transferase (NCBI) | compare |
| b0548 | ninE | +0.3 | 1.4 | DLP12 prophage; conserved protein (NCBI) | compare |
| b2023 | hisH | +0.3 | 1.5 | imidazole glycerol phosphate synthase subunit HisH (NCBI) | compare |
| b0542 | renD | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0726 | sucA | +0.3 | 1.2 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b1335 | ogt | +0.2 | 1.2 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b0785 | moaE | +0.2 | 1.3 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1515 | lsrD | +0.2 | 0.9 | AI2 transporter (NCBI) | compare |
| b4527 | b1354 | +0.2 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4494 | arpB | +0.2 | 0.7 | no description | compare |
| b1346 | ydaQ | +0.2 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1130 | phoP | +0.2 | 0.5 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b2959 | yggL | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3206 | npr | +0.2 | 2.0 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b4618 | tisB | +0.2 | 1.5 | lexA-regulated toxic peptide (RefSeq) | compare |
| b2398 | yfeC | +0.2 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4277 | yjgZ | +0.2 | 1.8 | KpLE2 phage-like element; predicted protein (NCBI) | compare |
| b1536 | ydeI | +0.2 | 0.4 | hypothetical protein (NCBI) | compare |
| b2051 | wcaH | +0.2 | 0.9 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2824 | ygdB | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4698 | mgrR | +0.2 | 1.2 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b1007 | b1007 | +0.2 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3613 | yibP | +0.2 | 0.7 | putative membrane protein (VIMSS) | compare |
| b4443 | gcvB | +0.2 | 0.1 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b2518 | ndk | +0.2 | 1.0 | nucleoside diphosphate kinase (NCBI) | compare |
| b1040 | csgD | +0.2 | 0.5 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1387 | maoC | +0.2 | 1.2 | fused aldehyde dehydrogenase/enoyl-CoA hydratase (NCBI) | compare |
| b2738 | ygbL | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b1382 | ynbE | +0.2 | 0.6 | predicted lipoprotein (NCBI) | compare |
| b2500 | purN | +0.2 | 1.7 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b4381 | deoC | +0.2 | 1.6 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b4157 | yjeN | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b2618 | b2618 | +0.2 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b2579 | yfiD | +0.2 | 0.7 | pyruvate formate lyase subunit (NCBI) | compare |
| b0296 | ykgM | +0.2 | 1.4 | 50S ribosomal protein L31 (NCBI) | compare |
| b2506 | yfgI | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b1573 | ydfC | +0.2 | 0.4 | Qin prophage; predicted protein (RefSeq) | compare |
| b4520 | ymgF | +0.2 | 0.6 | hypothetical protein (NCBI) | compare |
| b1750 | ydjX | +0.2 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1341 | b1341 | +0.2 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2036 | glf | +0.2 | 1.8 | UDP-galactopyranose mutase, FAD/NAD(P)-binding (NCBI) | compare |
| b1751 | ydjY | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1113 | ycfS | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b1618 | uidR | +0.2 | 1.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1699 | ydiS | +0.2 | 0.7 | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | compare |
| b1689 | b1689 | +0.2 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4234 | yjgA | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b2388 | glk | +0.2 | 1.6 | glucokinase (NCBI) | compare |
| b3006 | exbB | +0.2 | 1.7 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1723 | pfkB | +0.2 | 1.3 | 6-phosphofructokinase II; suppressor of pfkA (VIMSS) | compare |
| b4656 | yjhY | +0.2 | 1.1 | no description | compare |
| b0746 | valZ | +0.2 | 0.9 | tRNA-Val (NCBI) | compare |
| b1376 | ynaF | +0.2 | 1.4 | putative filament protein (VIMSS) | compare |
| b4415 | hokE | +0.2 | 1.4 | toxic polypeptide, small (NCBI) | compare |
| b2202 | napC | +0.2 | 1.1 | nitrate reductase, cytochrome c-type, periplasmic (NCBI) | compare |
| b2314 | dedD | +0.2 | 1.3 | putative lipoprotein (VIMSS) | compare |
| b3361 | fic | +0.2 | 1.4 | stationary-phase protein, cell division (NCBI) | compare |
| b1158 | pin | +0.2 | 1.5 | e14 prophage; site-specific DNA recombinase (NCBI) | compare |
| b4108 | phnA | +0.2 | 1.6 | hypothetical protein (NCBI) | compare |
| b1035 | ycdY | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b2264 | menD | +0.2 | 1.6 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b1600 | mdtJ | +0.2 | 0.5 | multidrug efflux system transporter (NCBI) | compare |
| b1977 | asnT | +0.2 | 0.9 | tRNA-Asn (NCBI) | compare |
| b1858 | znuC | +0.2 | 1.4 | high-affinity zinc transporter ATPase (NCBI) | compare |
| b1760 | ynjH | +0.2 | 1.2 | hypothetical protein (NCBI) | compare |
| b2814 | metZ | +0.2 | 0.6 | tRNA-Met (NCBI) | compare |
| b1086 | rluC | +0.2 | 1.3 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b0456 | ybaA | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b1785 | yeaI | +0.2 | 0.8 | predicted diguanylate cyclase (NCBI) | compare |
| b1038 | csgF | +0.2 | 0.8 | predicted transport protein (NCBI) | compare |
| b2044 | wcaL | +0.2 | 0.7 | predicted glycosyl transferase (NCBI) | compare |
| b4594 | ymgJ | +0.2 | 0.8 | hypothetical protein (RefSeq) | compare |
| b4633 | xisD | +0.2 | 1.2 | no description | compare |
| b2195 | ccmG | +0.2 | 0.7 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b1841 | yobA | +0.2 | 0.7 | hypothetical protein (NCBI) | compare |
| b1734 | chbF | +0.2 | 1.4 | cryptic phospho-beta-glucosidase, NAD(P)-binding (NCBI) | compare |
| b1409 | ynbB | +0.2 | 0.2 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b2250 | b2250 | +0.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0210 | yafE | +0.2 | 1.3 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b1144 | ymfJ | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2248 | yfaX | +0.2 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2622 | intA | +0.2 | 1.6 | CP4-57 prophage; integrase (NCBI) | compare |
| b4480 | hdfR | +0.2 | 1.3 | transcriptional regulator HdfR (NCBI) | compare |
| b2859 | ygeO | +0.2 | 0.7 | hypothetical protein (RefSeq) | compare |
| b0961 | yccF | +0.2 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b2572 | rseA | +0.2 | 1.5 | anti-sigma factor (NCBI) | compare |