| | gene | name | fitness | t score | description | |
|---|
| b2934 | cmtB | +1.6 | 1.4 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4699 | fnrS | +1.3 | 2.1 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3979 | thrT | +1.2 | 0.5 | tRNA-Thr (NCBI) | compare |
| b3027 | ygiZ | +1.0 | 0.6 | conserved inner membrane protein (NCBI) | compare |
| b1165 | ymgA | +0.9 | 0.5 | hypothetical protein (NCBI) | compare |
| b4596 | yciZ | +0.8 | 2.1 | hypothetical protein (RefSeq) | compare |
| b0630 | lipB | +0.8 | 1.4 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1576 | ydfD | +0.8 | 0.4 | Qin prophage; predicted protein (NCBI) | compare |
| b1545 | pinQ | +0.8 | 0.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1351 | racC | +0.8 | 0.6 | Rac prophage; predicted protein (NCBI) | compare |
| b4538 | yoeF | +0.8 | 2.3 | hypothetical protein (RefSeq) | compare |
| b1205 | ychH | +0.8 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b0542 | renD | +0.8 | 2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1499 | ydeO | +0.8 | 0.4 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b4505 | insX | +0.8 | 1.5 | predicted IS protein (RefSeq) | compare |
| b1257 | yciE | +0.7 | 0.4 | hypothetical protein (NCBI) | compare |
| b1409 | ynbB | +0.7 | 0.7 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b0114 | aceE | +0.7 | 1.7 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4497 | yeeL | +0.7 | 1.2 | no description | compare |
| b1506 | yneL | +0.7 | 1.5 | predicted transcriptional regulator (NCBI) | compare |
| b4503 | yafF | +0.7 | 1.3 | no description | compare |
| b1951 | rcsA | +0.7 | 1.4 | DNA-binding transcriptional activator, co-regulator with RcsB (NCBI) | compare |
| b3120 | yhaB | +0.7 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1167 | ymgC | +0.7 | 0.3 | hypothetical protein (NCBI) | compare |
| b1363 | trkG | +0.7 | 0.4 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b1497 | b1497 | +0.7 | 0.4 | putative enzyme (VIMSS) | compare |
| b1823 | cspC | +0.7 | 2.3 | stress protein, member of the CspA-family (NCBI) | compare |
| b0730 | mngR | +0.7 | 1.3 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1348 | lar | +0.6 | 1.8 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1161 | ycgX | +0.6 | 1.0 | hypothetical protein (NCBI) | compare |
| b1762 | b1762 | +0.6 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1505 | ydeT | +0.6 | 1.0 | hypothetical protein (RefSeq) | compare |
| b4494 | arpB | +0.6 | 1.3 | no description | compare |
| b1573 | ydfC | +0.6 | 1.1 | Qin prophage; predicted protein (RefSeq) | compare |
| b1058 | yceO | +0.6 | 0.3 | hypothetical protein (NCBI) | compare |
| b4533 | ynfO | +0.5 | 1.6 | Qin prophage; predicted protein (NCBI) | compare |
| b1961 | dcm | +0.5 | 1.1 | DNA cytosine methylase (NCBI) | compare |
| b1407 | ydbD | +0.5 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b1176 | minC | +0.5 | 1.3 | septum formation inhibitor (NCBI) | compare |
| b4640 | yoeG | +0.5 | 1.5 | no description | compare |
| b1536 | ydeI | +0.5 | 0.6 | hypothetical protein (NCBI) | compare |
| b1038 | csgF | +0.5 | 2.0 | predicted transport protein (NCBI) | compare |
| b0310 | ykgH | +0.5 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b0407 | yajC | +0.5 | 1.1 | preprotein translocase subunit YajC (NCBI) | compare |
| b1001 | yccE | +0.5 | 0.2 | hypothetical protein (NCBI) | compare |
| b2859 | ygeO | +0.5 | 1.3 | hypothetical protein (RefSeq) | compare |
| b1936 | intG | +0.5 | 0.7 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b4642 | yoeD | +0.5 | 1.0 | no description | compare |
| b1542 | ydfI | +0.5 | 1.6 | predicted mannonate dehydrogenase (NCBI) | compare |
| b2055 | wcaE | +0.5 | 0.2 | predicted glycosyl transferase (NCBI) | compare |
| b1130 | phoP | +0.5 | 0.7 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0714 | nei | +0.5 | 2.9 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b1182 | hlyE | +0.5 | 0.3 | hemolysin E (VIMSS) | compare |
| b2356 | yfdM | +0.5 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4570 | lomR | +0.5 | 1.6 | no description | compare |
| b2792 | yqcC | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b1347 | ydaC | +0.4 | 0.2 | Rac prophage; predicted protein (NCBI) | compare |
| b2959 | yggL | +0.4 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4152 | frdC | +0.4 | 2.8 | fumarate reductase subunit C (NCBI) | compare |
| b1679 | sufE | +0.4 | 1.5 | cysteine desufuration protein SufE (NCBI) | compare |
| b1025 | ycdT | +0.4 | 1.0 | predicted diguanylate cyclase (NCBI) | compare |
| b1690 | ydiM | +0.4 | 1.0 | predicted transporter (NCBI) | compare |
| b1940 | fliH | +0.4 | 2.4 | flagellar biosynthesis; export of flagellar proteins? (VIMSS) | compare |
| b4631 | ykgQ | +0.4 | 1.6 | no description | compare |
| b4551 | yheV | +0.4 | 1.3 | hypothetical protein (NCBI) | compare |
| b1339 | abgR | +0.4 | 2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2110 | yehC | +0.4 | 0.9 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b4590 | ybfK | +0.4 | 0.6 | hypothetical protein (RefSeq) | compare |
| b1368 | ynaA | +0.4 | 1.5 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b0713 | ybgL | +0.4 | 2.3 | hypothetical protein (NCBI) | compare |
| b1138 | ymfE | +0.4 | 0.9 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b4618 | tisB | +0.4 | 2.2 | lexA-regulated toxic peptide (RefSeq) | compare |
| b1976 | b1976 | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b1168 | b1168 | +0.4 | 1.8 | putative proteases (VIMSS) | compare |
| b4431 | rprA | +0.4 | 1.2 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b1029 | ycdU | +0.4 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b0998 | torD | +0.4 | 0.7 | chaperone protein TorD (NCBI) | compare |
| b0247 | ykfG | +0.4 | 1.0 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1900 | araG | +0.4 | 2.0 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2023 | hisH | +0.4 | 2.3 | imidazole glycerol phosphate synthase subunit HisH (NCBI) | compare |
| b1129 | phoQ | +0.4 | 0.7 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b1332 | ynaJ | +0.4 | 0.3 | predicted inner membrane protein (NCBI) | compare |
| b2897 | ygfY | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b2058 | wcaB | +0.4 | 0.8 | predicted acyl transferase (NCBI) | compare |
| b1258 | yciF | +0.4 | 0.4 | hypothetical protein (NCBI) | compare |
| b1399 | paaX | +0.4 | 1.6 | DNA-binding transcriptional repressor of phenylacetic acid degradation, aryl-CoA responsive (NCBI) | compare |
| b1353 | sieB | +0.4 | 2.3 | phage superinfection exclusion protein (VIMSS) | compare |
| b4042 | dgkA | +0.4 | 0.2 | diacylglycerol kinase (NCBI) | compare |
| b4515 | ybgT | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b2809 | b2809 | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1330 | ynaI | +0.4 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b3623 | rfaK | +0.4 | 1.3 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b1480 | sra | +0.4 | 0.5 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b3068 | ygjF | +0.4 | 2.3 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b4655 | ythA | +0.3 | 1.2 | expressed protein (RefSeq) | compare |
| b1305 | pspB | +0.3 | 0.9 | phage shock protein B (NCBI) | compare |
| b0933 | ssuB | +0.3 | 1.7 | alkanesulfonate transporter subunit (NCBI) | compare |
| b0926 | ycbK | +0.3 | 2.3 | hypothetical protein (NCBI) | compare |
| b1760 | ynjH | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b1408 | b1408 | +0.3 | 1.9 | probable enzyme (VIMSS) | compare |
| b1954 | dsrA | +0.3 | 1.3 | regulatory antisense RNA (NCBI) | compare |
| b2175 | spr | +0.3 | 1.4 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3100 | yqjK | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b1511 | ydeV | +0.3 | 2.0 | putative kinase (VIMSS) | compare |
| b0850 | ybjC | +0.3 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b4464 | ygfQ | +0.3 | 2.6 | predicted transporter (NCBI) | compare |
| b1686 | ydiI | +0.3 | 0.6 | hypothetical protein (NCBI) | compare |
| b1742 | b1742 | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1530 | marR | +0.3 | 1.4 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b0802 | ybiJ | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b1558 | cspF | +0.3 | 1.0 | Qin prophage; cold shock protein (NCBI) | compare |
| b1342 | ydaN | +0.3 | 1.9 | zinc transporter (NCBI) | compare |
| b4646 | yrdE | +0.3 | 1.8 | no description | compare |
| b4480 | hdfR | +0.3 | 2.1 | transcriptional regulator HdfR (NCBI) | compare |
| b1304 | pspA | +0.3 | 1.5 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b1831 | proQ | +0.3 | 1.2 | putative solute/DNA competence effector (NCBI) | compare |
| b1028 | ymdE | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b0754 | aroG | +0.3 | 2.2 | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) | compare |
| b1495 | yddB | +0.3 | 2.4 | predicted porin protein (NCBI) | compare |
| b1838 | pphA | +0.3 | 1.7 | protein phosphatase 1 modulates phosphoproteins, signals protein misfolding (VIMSS) | compare |
| b4151 | frdD | +0.3 | 1.5 | fumarate reductase subunit D (NCBI) | compare |
| b2212 | alkB | +0.3 | 1.9 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) | compare |
| b3169 | nusA | +0.3 | 0.8 | transcription elongation factor NusA (NCBI) | compare |
| b1572 | ydfB | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2768 | ygcP | +0.3 | 1.3 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b2399 | yfeD | +0.3 | 1.6 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1134 | ymfB | +0.3 | 1.2 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b0546 | ybcM | +0.3 | 2.0 | DLP12 prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0803 | ybiI | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b0108 | ppdD | +0.3 | 2.3 | predicted major pilin subunit (NCBI) | compare |
| b4656 | yjhY | +0.3 | 1.9 | no description | compare |
| b1551 | b1551 | +0.3 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b3037 | ygiB | +0.3 | 1.5 | conserved outer membrane protein (RefSeq) | compare |
| b0878 | b0878 | +0.3 | 1.5 | putative membrane protein (VIMSS) | compare |
| b3875 | ompL | +0.3 | 1.5 | predicted outer membrane porin L (NCBI) | compare |
| b2195 | ccmG | +0.3 | 1.1 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b0737 | tolQ | +0.3 | 0.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2284 | nuoF | +0.3 | 1.8 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1930 | yedF | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b0549 | ybcO | +0.3 | 1.1 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1410 | ynbC | +0.3 | 1.6 | predicted hydrolase (NCBI) | compare |
| b2674 | nrdI | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1519 | tam | +0.3 | 1.7 | trans-aconitate 2-methyltransferase (NCBI) | compare |
| b2250 | b2250 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0295 | ykgL | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b0339 | cynT | +0.3 | 1.3 | carbonic anhydrase (NCBI) | compare |
| b2435 | amiA | +0.3 | 2.0 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0942 | ycbU | +0.3 | 1.7 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1732 | katE | +0.3 | 1.7 | hydroperoxidase HPII(III) (catalase) (NCBI) | compare |
| b3129 | sohA | +0.3 | 1.9 | predicted regulator (NCBI) | compare |
| b1341 | b1341 | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4301 | sgcE | +0.3 | 1.8 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b1465 | narV | +0.3 | 0.7 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b1387 | maoC | +0.3 | 1.8 | fused aldehyde dehydrogenase/enoyl-CoA hydratase (NCBI) | compare |
| b1153 | ymfQ | +0.3 | 1.0 | e14 prophage; conserved protein (NCBI) | compare |
| b2362 | yfdS | +0.3 | 1.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b4363 | yjjB | +0.3 | 1.6 | conserved inner membrane protein (RefSeq) | compare |
| b2187 | yejL | +0.3 | 0.6 | hypothetical protein (NCBI) | compare |
| b2230 | yfaA | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0974 | hyaC | +0.3 | 1.0 | hydrogenase 1, b-type cytochrome subunit (NCBI) | compare |
| b0705 | ybfL | +0.3 | 0.2 | putative receptor protein (VIMSS) | compare |
| b1143 | ymfI | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b0535 | fimZ | +0.3 | 1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4493 | gapC | +0.3 | 1.1 | no description | compare |
| b2804 | fucU | +0.3 | 1.5 | L-fucose mutarotase (NCBI) | compare |
| b0323 | yahI | +0.3 | 1.7 | predicted carbamate kinase-like protein (NCBI) | compare |
| b1281 | pyrF | +0.3 | 1.2 | orotidine 5'-phosphate decarboxylase (NCBI) | compare |
| b0632 | dacA | +0.3 | 2.2 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1085 | b1085 | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1453 | ansP | +0.3 | 1.6 | L-asparagine permease (VIMSS) | compare |
| b4153 | frdB | +0.3 | 2.2 | fumarate reductase (anaerobic), Fe-S subunit (NCBI) | compare |
| b1698 | ydiR | +0.3 | 1.5 | predicted electron transfer flavoprotein, FAD-binding (NCBI) | compare |
| b1693 | aroD | +0.3 | 1.4 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0696 | kdpC | +0.3 | 0.9 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b0820 | ybiT | +0.3 | 2.0 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2367 | emrY | +0.3 | 1.8 | predicted multidrug efflux system (NCBI) | compare |
| b1948 | fliP | +0.3 | 1.4 | flagellar biosynthesis protein P (NCBI) | compare |
| b1121 | ycfZ | +0.3 | 0.6 | predicted inner membrane protein (NCBI) | compare |
| b2258 | b2258 | +0.3 | 0.6 | putative transport/receptor protein (VIMSS) | compare |
| b1691 | ydiN | +0.3 | 1.0 | predicted transporter (RefSeq) | compare |
| b4487 | yjdP | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b2915 | yqfE | +0.3 | 1.2 | hypothetical protein (RefSeq) | compare |
| b0102 | yacF | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b1758 | b1758 | +0.3 | 0.5 | putative cytochrome oxidase (VIMSS) | compare |
| b0245 | ykfI | +0.3 | 1.7 | CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system (NCBI) | compare |
| b1335 | ogt | +0.3 | 1.2 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b1485 | ddpC | +0.3 | 0.9 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b0821 | ybiU | +0.3 | 2.1 | hypothetical protein (NCBI) | compare |
| b1993 | cobU | +0.3 | 1.4 | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (NCBI) | compare |
| b1070 | flgN | +0.3 | 0.6 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b1792 | yeaO | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3545 | proK | +0.3 | 1.0 | tRNA-Pro (NCBI) | compare |
| b4492 | ydbA | +0.3 | 2.1 | no description | compare |
| b4675 | yoaJ | +0.3 | 1.0 | expressed protein (RefSeq) | compare |
| b2579 | yfiD | +0.3 | 0.7 | pyruvate formate lyase subunit (NCBI) | compare |
| b0521 | ybcF | +0.3 | 1.5 | predicted carbamate kinase (NCBI) | compare |
| b4408 | csrB | +0.3 | 0.9 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b4313 | fimE | +0.3 | 2.1 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b2002 | yeeS | +0.3 | 1.6 | CP4-44 prophage; predicted DNA repair protein (NCBI) | compare |
| b2141 | yohJ | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |