| | gene | name | fitness | t score | description | |
|---|
| b4704 | arrS | +0.9 | 0.5 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b0730 | mngR | +0.9 | 1.9 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1936 | intG | +0.9 | 1.4 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1361 | ydaW | +0.8 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b4596 | yciZ | +0.8 | 2.0 | hypothetical protein (RefSeq) | compare |
| b0998 | torD | +0.7 | 1.7 | chaperone protein TorD (NCBI) | compare |
| b1176 | minC | +0.6 | 1.8 | septum formation inhibitor (NCBI) | compare |
| b1476 | fdnI | +0.6 | 1.1 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b2934 | cmtB | +0.6 | 0.5 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b3120 | yhaB | +0.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1195 | ymgE | +0.6 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b0798 | ybiA | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1730 | ydjO | +0.5 | 1.1 | predicted protein (RefSeq) | compare |
| b1557 | cspB | +0.5 | 1.6 | Qin prophage; cold shock protein (NCBI) | compare |
| b1742 | b1742 | +0.5 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0630 | lipB | +0.5 | 0.8 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1753 | ynjA | +0.5 | 2.3 | hypothetical protein (NCBI) | compare |
| b3790 | rffC | +0.5 | 3.2 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0114 | aceE | +0.5 | 1.1 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b0218 | yafU | +0.5 | 2.1 | predicted inner membrane protein (RefSeq) | compare |
| b4538 | yoeF | +0.5 | 1.3 | hypothetical protein (RefSeq) | compare |
| b1882 | cheY | +0.5 | 0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1765 | ydjA | +0.5 | 0.8 | predicted oxidoreductase (NCBI) | compare |
| b4406 | yaeP | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b4642 | yoeD | +0.4 | 1.3 | no description | compare |
| b4045 | yjbJ | +0.4 | 1.9 | predicted stress response protein (NCBI) | compare |
| b1357 | ydaS | +0.4 | 1.8 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4042 | dgkA | +0.4 | 0.3 | diacylglycerol kinase (NCBI) | compare |
| b2532 | yfhQ | +0.4 | 2.7 | predicted methyltransferase (NCBI) | compare |
| b4592 | yccB | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b4603 | rseX | +0.4 | 0.6 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b3250 | mreC | +0.4 | 1.3 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b3791 | rffA | +0.4 | 3.1 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0542 | renD | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1831 | proQ | +0.4 | 1.6 | putative solute/DNA competence effector (NCBI) | compare |
| b1179 | ycgL | +0.4 | 2.0 | conserved protein (NCBI) | compare |
| b3623 | rfaK | +0.4 | 1.5 | lipopolysaccharide core biosynthesis (NCBI) | compare |
| b2051 | wcaH | +0.4 | 0.8 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b2287 | nuoB | +0.4 | 2.2 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1506 | yneL | +0.4 | 0.6 | predicted transcriptional regulator (NCBI) | compare |
| b0802 | ybiJ | +0.4 | 1.9 | hypothetical protein (NCBI) | compare |
| b0381 | ddlA | +0.4 | 2.9 | D-alanylalanine synthetase (NCBI) | compare |
| b2846 | yqeH | +0.4 | 0.4 | orf, hypothetical protein (VIMSS) | compare |
| b1930 | yedF | +0.4 | 2.5 | hypothetical protein (NCBI) | compare |
| b0641 | rlpB | +0.4 | 1.9 | minor lipoprotein (NCBI) | compare |
| b4418 | sraB | +0.4 | 0.8 | unknown RNA (NCBI) | compare |
| b2264 | menD | +0.4 | 2.9 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b1448 | yncA | +0.4 | 1.0 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b2064 | asmA | +0.4 | 2.7 | predicted assembly protein (NCBI) | compare |
| b1113 | ycfS | +0.4 | 2.2 | hypothetical protein (NCBI) | compare |
| b1482 | osmC | +0.3 | 1.1 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0193 | yaeF | +0.3 | 2.6 | orf, hypothetical protein (VIMSS) | compare |
| b1949 | fliQ | +0.3 | 1.0 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1205 | ychH | +0.3 | 1.3 | predicted inner membrane protein (NCBI) | compare |
| b1007 | b1007 | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1919 | yedO | +0.3 | 1.3 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b2809 | b2809 | +0.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1515 | lsrD | +0.3 | 1.3 | AI2 transporter (NCBI) | compare |
| b1530 | marR | +0.3 | 1.6 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b3863 | polA | +0.3 | 0.5 | DNA polymerase I (NCBI) | compare |
| b2208 | napF | +0.3 | 2.0 | ferredoxin-type protein, predicted role in electron transfer to periplasmic nitrate reductase (NapA) (NCBI) | compare |
| b1185 | dsbB | +0.3 | 1.9 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b4410 | ecnA | +0.3 | 0.9 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b3786 | rffE | +0.3 | 2.8 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0209 | yafD | +0.3 | 2.4 | hypothetical protein (NCBI) | compare |
| b3787 | rffD | +0.3 | 2.7 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0843 | ybjH | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b1575 | dicB | +0.3 | 0.9 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b2915 | yqfE | +0.3 | 1.6 | hypothetical protein (RefSeq) | compare |
| b1586 | b1586 | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1792 | yeaO | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0247 | ykfG | +0.3 | 0.9 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1727 | yniC | +0.3 | 1.3 | predicted hydrolase (NCBI) | compare |
| b3624 | rfaZ | +0.3 | 1.1 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b2188 | yejM | +0.3 | 2.4 | predicted hydrolase, inner membrane (NCBI) | compare |
| b4692 | oweE | +0.3 | 1.4 | no description | compare |
| b1103 | ycfF | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1038 | csgF | +0.3 | 1.4 | predicted transport protein (NCBI) | compare |
| b1153 | ymfQ | +0.3 | 1.0 | e14 prophage; conserved protein (NCBI) | compare |
| b2399 | yfeD | +0.3 | 1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1261 | trpB | +0.3 | 1.5 | tryptophan synthase subunit beta (NCBI) | compare |
| b1520 | b1520 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1175 | minD | +0.3 | 1.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b4513 | kdpF | +0.3 | 0.7 | potassium ion accessory transporter subunit (NCBI) | compare |
| b4609 | ryfD | +0.3 | 1.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b4546 | ypeB | +0.3 | 0.6 | hypothetical protein (NCBI) | compare |
| b1553 | ydfP | +0.3 | 0.6 | Qin prophage; conserved protein (NCBI) | compare |
| b0696 | kdpC | +0.3 | 0.9 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b1977 | asnT | +0.3 | 0.9 | tRNA-Asn (NCBI) | compare |
| b0880 | cspD | +0.3 | 1.0 | cold shock protein homolog (NCBI) | compare |
| b0245 | ykfI | +0.3 | 2.3 | CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system (NCBI) | compare |
| b0294 | ykgK | +0.3 | 1.5 | predicted regulator (NCBI) | compare |
| b0183 | rnhB | +0.3 | 1.6 | ribonuclease HII (NCBI) | compare |
| b2776 | ygcE | +0.3 | 2.1 | predicted kinase (NCBI) | compare |
| b1260 | trpA | +0.3 | 2.0 | tryptophan synthase subunit alpha (NCBI) | compare |
| b4481 | rffT | +0.3 | 1.9 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3037 | ygiB | +0.3 | 1.7 | conserved outer membrane protein (RefSeq) | compare |
| b1351 | racC | +0.3 | 0.2 | Rac prophage; predicted protein (NCBI) | compare |
| b1487 | ddpA | +0.3 | 1.8 | D-ala-D-a la transporter subunit (NCBI) | compare |
| b0726 | sucA | +0.3 | 1.3 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b4646 | yrdE | +0.3 | 1.1 | no description | compare |
| b1689 | b1689 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3100 | yqjK | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b2250 | b2250 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4367 | fhuF | +0.3 | 2.1 | ferric iron reductase involved in ferric hydroximate transport (NCBI) | compare |
| b3836 | b3836 | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1573 | ydfC | +0.3 | 0.6 | Qin prophage; predicted protein (RefSeq) | compare |
| b3962 | udhA | +0.3 | 1.9 | putative oxidoreductase (VIMSS) | compare |
| b3236 | mdh | +0.3 | 2.0 | malate dehydrogenase (NCBI) | compare |
| b1768 | ydjB | +0.3 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2408 | yfeN | +0.2 | 1.9 | conserved outer membrane protein (NCBI) | compare |
| b4543 | ypaA | +0.2 | 1.4 | predicted protein (NCBI) | compare |
| b4579 | yaiX | +0.2 | 1.8 | no description | compare |
| b1380 | ldhA | +0.2 | 1.2 | D-lactate dehydrogenase (NCBI) | compare |
| b3392 | yrfA | +0.2 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1729 | ydjN | +0.2 | 1.1 | predicted transporter (NCBI) | compare |
| b4363 | yjjB | +0.2 | 1.4 | conserved inner membrane protein (RefSeq) | compare |
| b0804 | ybiX | +0.2 | 1.9 | putative enzyme (VIMSS) | compare |
| b2435 | amiA | +0.2 | 1.7 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b2010 | dacD | +0.2 | 1.8 | penicillin binding protein 6b (VIMSS) | compare |
| b2490 | b2490 | +0.2 | 1.6 | putative protein processing element (VIMSS) | compare |
| b4552 | yrhC | +0.2 | 0.6 | no description | compare |
| b0920 | ycbC | +0.2 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b2261 | menC | +0.2 | 1.8 | O-succinylbenzoate synthase (NCBI) | compare |
| b0192 | nlpE | +0.2 | 1.7 | lipoprotein involved with copper homeostasis and adhesion (NCBI) | compare |
| b4458 | oxyS | +0.2 | 0.4 | global regulatory RNA (NCBI) | compare |
| b1566 | flxA | +0.2 | 1.3 | Qin prophage; predicted protein (NCBI) | compare |
| b1811 | yoaH | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b1849 | purT | +0.2 | 1.6 | phosphoribosylglycinamide formyltransferase 2 (NCBI) | compare |
| b1408 | b1408 | +0.2 | 1.4 | probable enzyme (VIMSS) | compare |
| b1963 | b1963 | +0.2 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1085 | b1085 | +0.2 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4541 | yehK | +0.2 | 1.3 | hypothetical protein (NCBI) | compare |
| b4588 | ylcH | +0.2 | 1.4 | hypothetical protein, DLP12 prophage (RefSeq) | compare |
| b2202 | napC | +0.2 | 1.2 | nitrate reductase, cytochrome c-type, periplasmic (NCBI) | compare |
| b4246 | pyrL | +0.2 | 1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b4280 | yjhC | +0.2 | 1.8 | putative dehydrogenase (VIMSS) | compare |
| b1948 | fliP | +0.2 | 1.7 | flagellar biosynthesis protein P (NCBI) | compare |
| b0329 | yahO | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b3627 | rfaI | +0.2 | 1.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b2481 | hyfA | +0.2 | 1.6 | hydrogenase 4 Fe-S subunit (VIMSS) | compare |
| b2916 | argP | +0.2 | 1.7 | chromosome replication initiation inhibitor protein (NCBI) | compare |
| b0310 | ykgH | +0.2 | 0.5 | predicted inner membrane protein (NCBI) | compare |
| b1097 | yceG | +0.2 | 1.4 | predicted aminodeoxychorismate lyase (NCBI) | compare |
| b2213 | ada | +0.2 | 1.4 | fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase (NCBI) | compare |
| b2096 | gatY | +0.2 | 1.2 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b2388 | glk | +0.2 | 1.5 | glucokinase (NCBI) | compare |
| b3483 | yhhH | +0.2 | 0.1 | orf, hypothetical protein (VIMSS) | compare |
| b1105 | ycfM | +0.2 | 1.0 | predicted outer membrane lipoprotein (NCBI) | compare |
| b2193 | narP | +0.2 | 1.7 | DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) | compare |
| b1355 | b1355 | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4277 | yjgZ | +0.2 | 1.9 | KpLE2 phage-like element; predicted protein (NCBI) | compare |
| b4595 | yciY | +0.2 | 1.0 | hypothetical protein (RefSeq) | compare |
| b1251 | yciI | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3794 | rffM | +0.2 | 1.8 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b4157 | yjeN | +0.2 | 1.1 | hypothetical protein (NCBI) | compare |
| b1418 | cybB | +0.2 | 0.8 | cytochrome b(561) (VIMSS) | compare |
| b1446 | ydcY | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b4444 | rygA | +0.2 | 1.2 | unknown RNA (NCBI) | compare |
| b1556 | b1556 | +0.2 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b3068 | ygjF | +0.2 | 1.3 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b2689 | yqaA | +0.2 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b0934 | ycbM | +0.2 | 1.2 | putative transport system permease protein (VIMSS) | compare |
| b4687 | shoB | +0.2 | 1.6 | toxic membrane protein (RefSeq) | compare |
| b1710 | btuE | +0.2 | 1.5 | predicted glutathione peroxidase (NCBI) | compare |
| b2486 | hyfF | +0.2 | 1.6 | NADH dehydrogenase subunit N (NCBI) | compare |
| b1847 | yebF | +0.2 | 0.6 | predicted protein (RefSeq) | compare |
| b4039 | ubiC | +0.2 | 1.6 | chorismate lyase (VIMSS) | compare |
| b1306 | pspC | +0.2 | 0.6 | DNA-binding transcriptional activator (NCBI) | compare |
| b0846 | ybjK | +0.2 | 1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1415 | aldA | +0.2 | 1.6 | Lactaldehyde / glycolaldehyde dehydrogenase aldA (EC 1.2.1.22; EC 1.2.1.21) (from data) | compare |
| b4331 | yjiI | +0.2 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0101 | yacG | +0.2 | 1.0 | zinc-binding protein (NCBI) | compare |
| b1822 | rrmA | +0.2 | 0.9 | 23S rRNA m1G745 methyltransferase (NCBI) | compare |
| b2818 | argA | +0.2 | 1.6 | N-acetylglutamate synthase (NCBI) | compare |
| b1421 | trg | +0.2 | 1.2 | methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor (NCBI) | compare |
| b3860 | dsbA | +0.2 | 1.9 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b4388 | serB | +0.2 | 1.7 | 3-phosphoserine phosphatase (NCBI) | compare |
| b3725 | pstB | +0.2 | 0.1 | phosphate transporter subunit (NCBI) | compare |
| b1945 | fliM | +0.2 | 1.6 | flagellar motor switch protein M (NCBI) | compare |
| b2187 | yejL | +0.2 | 0.9 | hypothetical protein (NCBI) | compare |
| b1686 | ydiI | +0.2 | 0.5 | hypothetical protein (NCBI) | compare |
| b1348 | lar | +0.2 | 0.6 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b2794 | yqcD | +0.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b2209 | eco | +0.2 | 0.5 | ecotin precursor (NCBI) | compare |
| b4032 | malG | +0.2 | 1.6 | maltose transporter subunit (NCBI) | compare |
| b2009 | sbmC | +0.2 | 1.2 | DNA gyrase inhibitor (NCBI) | compare |
| b2587 | kgtP | +0.2 | 1.5 | alpha-ketoglutarate transporter (NCBI) | compare |
| b2352 | yfdI | +0.2 | 0.3 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b3792 | wzxE | +0.2 | 1.6 | O-antigen translocase (NCBI) | compare |
| b4000 | hupA | +0.2 | 1.2 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b1623 | add | +0.2 | 1.2 | adenosine deaminase (NCBI) | compare |
| b1077 | flgF | +0.2 | 1.6 | flagellar component of cell-proximal portion of basal-body rod (NCBI) | compare |
| b4640 | yoeG | +0.2 | 0.7 | no description | compare |
| b3784 | rfe | +0.2 | 1.8 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b0632 | dacA | +0.2 | 1.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1962 | yedJ | +0.2 | 1.6 | predicted phosphohydrolase (NCBI) | compare |
| b1607 | ydgC | +0.2 | 0.7 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b2275 | yfbP | +0.2 | 1.5 | TPR-like repeats-containing protein (NCBI) | compare |
| b0388 | aroL | +0.2 | 1.3 | shikimate kinase II (NCBI) | compare |