| | gene | name | fitness | t score | description | |
|---|
| b0462 | acrB | -5.3 | -27.1 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -4.9 | -18.2 | multidrug efflux system (NCBI) | compare |
| b4237 | nrdG | -4.8 | -7.9 | anaerobic ribonucleotide reductase activating protein (NCBI) | compare |
| b4238 | nrdD | -4.5 | -12.0 | anaerobic ribonucleoside triphosphate reductase (NCBI) | compare |
| b4053 | alr | -4.4 | -17.6 | alanine racemase (NCBI) | compare |
| b4041 | plsB | -3.7 | -5.7 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b0386 | proC | -2.9 | -4.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b2620 | smpB | -2.8 | -1.9 | SsrA-binding protein (NCBI) | compare |
| b4201 | priB | -2.3 | -5.1 | primosomal replication protein N (NCBI) | compare |
| b0912 | ihfB | -2.2 | -2.6 | integration host factor subunit beta (NCBI) | compare |
| b0949 | uup | -2.1 | -10.0 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4699 | fnrS | -2.0 | -1.3 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b3035 | tolC | -2.0 | -1.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0243 | proA | -1.9 | -11.3 | gamma-glutamyl phosphate reductase (NCBI) | compare |
| b1290 | sapF | -1.7 | -2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1677 | lpp | -1.7 | -1.8 | murein lipoprotein (NCBI) | compare |
| b0242 | proB | -1.5 | -6.4 | gamma-glutamyl kinase (NCBI) | compare |
| b2912 | ygfA | -1.5 | -2.9 | putative ligase (VIMSS) | compare |
| b4535 | yniD | -1.4 | -1.9 | predicted protein (RefSeq) | compare |
| b1126 | potA | -1.4 | -6.9 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b1361 | ydaW | -1.3 | -0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1575 | dicB | -1.2 | -1.6 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b1123 | potD | -1.2 | -4.1 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b3863 | polA | -1.2 | -1.3 | DNA polymerase I (NCBI) | compare |
| b4520 | ymgF | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b1648 | b1648 | -1.1 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1124 | potC | -1.1 | -5.2 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1855 | lpxM | -1.0 | -3.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1125 | potB | -1.0 | -3.6 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1850 | eda | -1.0 | -1.8 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0232 | yafN | -1.0 | -1.1 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b2820 | recB | -1.0 | -0.6 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2114 | metG | -1.0 | -2.8 | methionyl-tRNA synthetase (NCBI) | compare |
| b1830 | prc | -1.0 | -3.8 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b1334 | fnr | -0.9 | -1.1 | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) | compare |
| b4647 | mokA | -0.9 | -1.3 | no description | compare |
| b0688 | pgm | -0.9 | -2.3 | phosphoglucomutase (NCBI) | compare |
| b2659 | b2659 | -0.9 | -3.5 | orf, hypothetical protein (VIMSS) | compare |
| b3229 | sspA | -0.9 | -2.2 | stringent starvation protein A (NCBI) | compare |
| b0902 | pflA | -0.9 | -4.3 | pyruvate formate lyase activating enzyme 1 (NCBI) | compare |
| b0200 | gmhB | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| b0903 | pflB | -0.8 | -5.9 | pyruvate formate lyase I (NCBI) | compare |
| b3082 | ygjM | -0.8 | -1.6 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3052 | rfaE | -0.8 | -3.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2814 | metZ | -0.8 | -1.8 | tRNA-Met (NCBI) | compare |
| b4066 | yjcF | -0.7 | -0.6 | hypothetical protein (NCBI) | compare |
| b1292 | sapC | -0.7 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1992 | cobS | -0.7 | -1.4 | cobalamin synthase (NCBI) | compare |
| b0167 | glnD | -0.7 | -2.9 | PII uridylyl-transferase (NCBI) | compare |
| b1088 | yceD | -0.7 | -2.5 | hypothetical protein (NCBI) | compare |
| b1685 | ydiH | -0.7 | -1.3 | predicted protein (RefSeq) | compare |
| b1199 | dhaL | -0.7 | -3.1 | dihydroxyacetone kinase, C-terminal domain (NCBI) | compare |
| b1147 | ymfL | -0.7 | -1.7 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b3935 | priA | -0.7 | -2.2 | primosome assembly protein PriA (NCBI) | compare |
| b4593 | ymgI | -0.7 | -0.6 | hypothetical protein (RefSeq) | compare |
| b1607 | ydgC | -0.7 | -0.8 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b1853 | yebK | -0.6 | -1.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1187 | fadR | -0.6 | -2.0 | fatty acid metabolism regulator (NCBI) | compare |
| b1591 | b1591 | -0.6 | -1.1 | putative oxidoreductase component (VIMSS) | compare |
| b2576 | srmB | -0.6 | -2.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b1860 | ruvB | -0.6 | -0.6 | Holliday junction DNA helicase B (NCBI) | compare |
| b1164 | ycgZ | -0.6 | -1.1 | hypothetical protein (NCBI) | compare |
| b4416 | rybA | -0.6 | -1.3 | unknown RNA (NCBI) | compare |
| b1593 | b1593 | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3781 | trxA | -0.6 | -2.3 | thioredoxin 1 (VIMSS) | compare |
| b0990 | cspG | -0.6 | -0.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3636 | rpmG | -0.6 | -1.9 | 50S ribosomal protein L33 (NCBI) | compare |
| b0234 | yafP | -0.6 | -1.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b2822 | recC | -0.6 | -3.2 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b3609 | secB | -0.6 | -2.2 | export protein SecB (NCBI) | compare |
| b4685 | yrbN | -0.6 | -2.2 | expressed protein (RefSeq) | compare |
| b1765 | ydjA | -0.6 | -0.6 | predicted oxidoreductase (NCBI) | compare |
| b4163 | glyV | -0.6 | -1.7 | tRNA-Gly (NCBI) | compare |
| b2642 | yfjW | -0.6 | -0.9 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1847 | yebF | -0.6 | -1.1 | predicted protein (RefSeq) | compare |
| b3930 | menA | -0.5 | -4.9 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b1293 | sapB | -0.5 | -0.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1067 | yceH | -0.5 | -2.7 | hypothetical protein (NCBI) | compare |
| b1821 | b1821 | -0.5 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b0685 | ybfE | -0.5 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3839 | tatC | -0.5 | -3.1 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3290 | trkA | -0.5 | -0.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2343 | b2343 | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1835 | yebU | -0.5 | -2.1 | putative nucleolar proteins (VIMSS) | compare |
| b2699 | recA | -0.5 | -0.3 | recombinase A (NCBI) | compare |
| b1921 | fliZ | -0.5 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3183 | obgE | -0.5 | -0.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1622 | malY | -0.5 | -2.1 | bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI) | compare |
| b2509 | xseA | -0.5 | -4.0 | exodeoxyribonuclease VII large subunit (NCBI) | compare |
| b1692 | ydiB | -0.5 | -1.8 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b3500 | gor | -0.5 | -1.4 | glutathione reductase (NCBI) | compare |
| b2646 | ypjF | -0.5 | -2.0 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b2007 | yeeX | -0.5 | -1.2 | conserved protein (RefSeq) | compare |
| b2262 | menB | -0.5 | -2.5 | naphthoate synthase (NCBI) | compare |
| b3868 | glnG | -0.5 | -3.5 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b3652 | recG | -0.5 | -4.1 | ATP-dependent DNA helicase (NCBI) | compare |
| b4215 | ytfI | -0.5 | -1.2 | hypothetical protein (NCBI) | compare |
| b1196 | ycgY | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| b1659 | ydhB | -0.5 | -1.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0249 | ykfF | -0.5 | -1.6 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0948 | ycbY | -0.5 | -2.7 | predicted methyltransferase (NCBI) | compare |
| b2024 | hisA | -0.5 | -1.9 | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) | compare |
| b4545 | ypdJ | -0.5 | -1.6 | no description | compare |
| b1263 | trpD | -0.5 | -1.3 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b2288 | nuoA | -0.5 | -1.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1533 | ydeD | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2279 | nuoK | -0.5 | -1.2 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1602 | pntB | -0.5 | -2.6 | pyridine nucleotide transhydrogenase (NCBI) | compare |
| b1754 | b1754 | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1480 | sra | -0.5 | -0.6 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b1221 | narL | -0.5 | -2.6 | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) (NCBI) | compare |
| b0965 | b0965 | -0.5 | -1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2285 | nuoE | -0.5 | -1.6 | NADH dehydrogenase subunit E (NCBI) | compare |
| b0222 | lpcA | -0.5 | -1.3 | phosphoheptose isomerase (NCBI) | compare |
| b1493 | gadB | -0.5 | -0.6 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1628 | rsxB | -0.5 | -1.8 | electron transport complex protein RnfB (NCBI) | compare |
| b1661 | cfa | -0.5 | -2.2 | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) | compare |
| b1620 | malI | -0.5 | -1.2 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2726 | hypA | -0.5 | -2.2 | protein involved in nickel insertion into hydrogenases 3 (NCBI) | compare |
| b0145 | dksA | -0.5 | -1.2 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2329 | aroC | -0.5 | -2.5 | chorismate synthase (NCBI) | compare |
| b4375 | prfC | -0.4 | -1.5 | peptide chain release factor 3 (NCBI) | compare |
| b1482 | osmC | -0.4 | -1.0 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b3261 | fis | -0.4 | -0.5 | DNA-binding protein Fis (NCBI) | compare |
| b3493 | pitA | -0.4 | -3.0 | phosphate transporter, low-affinity (NCBI) | compare |
| b1594 | dgsA | -0.4 | -1.9 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1589 | ynfG | -0.4 | -1.7 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b1842 | holE | -0.4 | -1.3 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0549 | ybcO | -0.4 | -1.0 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1192 | ldcA | -0.4 | -0.8 | L,D-carboxypeptidase A (NCBI) | compare |
| b1346 | ydaQ | -0.4 | -0.8 | orf, hypothetical protein (VIMSS) | compare |
| b2450 | yffS | -0.4 | -1.0 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4523 | yciX | -0.4 | -2.2 | hypothetical protein (RefSeq) | compare |
| b0118 | acnB | -0.4 | -0.3 | aconitate hydratase (NCBI) | compare |
| b1817 | manX | -0.4 | -2.7 | fused mannose-specific PTS enzymes: IIA component/IIB component (NCBI) | compare |
| b0088 | murD | -0.4 | -1.5 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1804 | rnd | -0.4 | -1.6 | ribonuclease D (NCBI) | compare |
| b1084 | rne | -0.4 | -2.3 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b1617 | uidA | -0.4 | -2.2 | beta-D-glucuronidase (NCBI) | compare |
| b1259 | yciG | -0.4 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0683 | fur | -0.4 | -0.6 | ferric uptake regulator (NCBI) | compare |
| b0806 | ybiM | -0.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1383 | ydbL | -0.4 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1531 | marA | -0.4 | -1.4 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b4493 | gapC | -0.4 | -1.0 | no description | compare |
| b2652 | ileY | -0.4 | -0.4 | tRNA-Ile (NCBI) | compare |
| b2528 | iscA | -0.4 | -1.2 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1518 | lsrG | -0.4 | -0.6 | autoinducer-2 (AI-2) modifying protein LsrG (NCBI) | compare |
| b2704 | srlB | -0.4 | -1.2 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4676 | yoaK | -0.4 | -0.2 | expressed protein (RefSeq) | compare |
| b1291 | sapD | -0.4 | -0.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1148 | ymfM | -0.4 | -1.6 | e14 prophage; predicted protein (NCBI) | compare |
| b1217 | chaB | -0.4 | -0.7 | cation transport regulator (NCBI) | compare |
| b2754 | ygbF | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4171 | miaA | -0.4 | -1.5 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b0999 | cbpM | -0.4 | -1.8 | modulator of CbpA co-chaperone (NCBI) | compare |
| b1269 | rluB | -0.4 | -1.7 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b0882 | clpA | -0.4 | -2.8 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | compare |
| b0920 | ycbC | -0.4 | -2.0 | conserved inner membrane protein (NCBI) | compare |
| b1012 | b1012 | -0.4 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0721 | sdhC | -0.4 | -1.5 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b4570 | lomR | -0.4 | -1.0 | no description | compare |
| b1429 | tehA | -0.4 | -0.6 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1186 | nhaB | -0.4 | -2.8 | NhaB sodium/proton transporter (Katherine Huang) | compare |
| b0053 | surA | -0.4 | -2.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3164 | pnp | -0.4 | -1.6 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0379 | yaiY | -0.4 | -2.2 | predicted inner membrane protein (NCBI) | compare |
| b0407 | yajC | -0.4 | -0.5 | preprotein translocase subunit YajC (NCBI) | compare |
| b2110 | yehC | -0.4 | -0.4 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b4409 | blr | -0.4 | -2.4 | beta-lactam resistance membrane protein (NCBI) | compare |
| b0471 | ybaB | -0.4 | -1.7 | hypothetical protein (NCBI) | compare |
| b1171 | b1171 | -0.4 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1151 | ymfO | -0.4 | -1.6 | e14 prophage; conserved protein (RefSeq) | compare |
| b2580 | ung | -0.4 | -2.2 | uracil-DNA glycosylase (NCBI) | compare |
| b1522 | yneF | -0.4 | -1.3 | predicted diguanylate cyclase (NCBI) | compare |
| b1931 | yedK | -0.4 | -1.5 | hypothetical protein (NCBI) | compare |
| b1336 | ydaH | -0.4 | -2.0 | putative pump protein (transport) (VIMSS) | compare |
| b0881 | clpS | -0.4 | -1.2 | ATP-dependent Clp protease adaptor protein ClpS (NCBI) | compare |
| b1592 | b1592 | -0.4 | -2.4 | putative chloride channel (VIMSS) | compare |
| b2531 | iscR | -0.4 | -0.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0998 | torD | -0.4 | -0.6 | chaperone protein TorD (NCBI) | compare |
| b0564 | appY | -0.4 | -0.7 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b1223 | narK | -0.3 | -1.3 | nitrate/nitrite transporter (NCBI) | compare |
| b0980 | appA | -0.3 | -1.8 | phosphoanhydride phosphorylase (NCBI) | compare |
| b2281 | nuoI | -0.3 | -1.3 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2666 | yqaE | -0.3 | -2.3 | predicted membrane protein (NCBI) | compare |
| b1889 | motB | -0.3 | -1.8 | flagellar motor protein MotB (NCBI) | compare |
| b1844 | exoX | -0.3 | -1.8 | exodeoxyribonuclease X (NCBI) | compare |
| b3838 | tatB | -0.3 | -2.5 | sec-independent translocase (NCBI) | compare |
| b4589 | ylcI | -0.3 | -1.5 | hypothetical protein (RefSeq) | compare |
| b0866 | ybjQ | -0.3 | -0.7 | hypothetical protein (NCBI) | compare |
| b1708 | nlpC | -0.3 | -1.7 | predicted lipoprotein (NCBI) | compare |
| b1953 | b1953 | -0.3 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3210 | arcB | -0.3 | -2.3 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b3813 | uvrD | -0.3 | -3.0 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b2817 | b2817 | -0.3 | -2.3 | putative amidase (VIMSS) | compare |
| b1891 | flhC | -0.3 | -1.6 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b0560 | nohB | -0.3 | -1.4 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b3162 | deaD | -0.3 | -1.6 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1273 | yciN | -0.3 | -0.7 | hypothetical protein (NCBI) | compare |