| | gene | name | fitness | t score | description | |
|---|
| b4538 | yoeF | +1.2 | 3.8 | hypothetical protein (RefSeq) | compare |
| b1936 | intG | +1.2 | 1.9 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1351 | racC | +1.1 | 0.9 | Rac prophage; predicted protein (NCBI) | compare |
| b1332 | ynaJ | +1.0 | 1.1 | predicted inner membrane protein (NCBI) | compare |
| b1576 | ydfD | +0.9 | 0.5 | Qin prophage; predicted protein (NCBI) | compare |
| b1409 | ynbB | +0.9 | 0.9 | predicted CDP-diglyceride synthase (NCBI) | compare |
| b1545 | pinQ | +0.9 | 0.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b0630 | lipB | +0.9 | 1.5 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1499 | ydeO | +0.9 | 0.4 | predicted DNA-binding transcriptional acfivator (NCBI) | compare |
| b1524 | yneH | +0.9 | 1.5 | predicted glutaminase (NCBI) | compare |
| b1363 | trkG | +0.9 | 0.6 | Rac prophage; potassium transporter subunit (NCBI) | compare |
| b4603 | rseX | +0.9 | 1.0 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1497 | b1497 | +0.8 | 0.5 | putative enzyme (VIMSS) | compare |
| b1257 | yciE | +0.8 | 0.4 | hypothetical protein (NCBI) | compare |
| b1160 | elbA | +0.8 | 1.0 | hypothetical protein (NCBI) | compare |
| b1040 | csgD | +0.7 | 1.4 | DNA-binding transcriptional activator in two-component regulatory system (NCBI) | compare |
| b1724 | ydiZ | +0.7 | 1.6 | hypothetical protein (NCBI) | compare |
| b1357 | ydaS | +0.7 | 2.4 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1167 | ymgC | +0.7 | 0.3 | hypothetical protein (NCBI) | compare |
| b1165 | ymgA | +0.7 | 0.3 | hypothetical protein (NCBI) | compare |
| b0617 | citD | +0.7 | 2.9 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b1691 | ydiN | +0.7 | 2.7 | predicted transporter (RefSeq) | compare |
| b1753 | ynjA | +0.7 | 1.8 | hypothetical protein (NCBI) | compare |
| b0880 | cspD | +0.6 | 2.4 | cold shock protein homolog (NCBI) | compare |
| b0623 | cspE | +0.6 | 2.1 | cold shock protein E (NCBI) | compare |
| b1520 | b1520 | +0.6 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b4640 | yoeG | +0.6 | 1.6 | no description | compare |
| b1865 | nudB | +0.6 | 1.3 | dATP pyrophosphohydrolase (NCBI) | compare |
| b1195 | ymgE | +0.6 | 1.8 | predicted inner membrane protein (NCBI) | compare |
| b1863 | ruvC | +0.6 | 0.9 | Holliday junction resolvase (NCBI) | compare |
| b1058 | yceO | +0.6 | 0.3 | hypothetical protein (NCBI) | compare |
| b4494 | arpB | +0.6 | 1.1 | no description | compare |
| b2071 | yegJ | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b4529 | ydbJ | +0.6 | 1.1 | hypothetical protein (NCBI) | compare |
| b2846 | yqeH | +0.6 | 0.5 | orf, hypothetical protein (VIMSS) | compare |
| b1690 | ydiM | +0.6 | 1.3 | predicted transporter (NCBI) | compare |
| b1506 | yneL | +0.5 | 0.9 | predicted transcriptional regulator (NCBI) | compare |
| b1347 | ydaC | +0.5 | 0.3 | Rac prophage; predicted protein (NCBI) | compare |
| b1001 | yccE | +0.5 | 0.3 | hypothetical protein (NCBI) | compare |
| b2055 | wcaE | +0.5 | 0.3 | predicted glycosyl transferase (NCBI) | compare |
| b1709 | btuD | +0.5 | 0.9 | vitamin B12-transporter ATPase (NCBI) | compare |
| b1882 | cheY | +0.5 | 0.5 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b1182 | hlyE | +0.5 | 0.3 | hemolysin E (VIMSS) | compare |
| b4590 | ybfK | +0.5 | 0.7 | hypothetical protein (RefSeq) | compare |
| b1613 | manA | +0.5 | 1.4 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2058 | wcaB | +0.5 | 1.1 | predicted acyl transferase (NCBI) | compare |
| b1950 | fliR | +0.5 | 1.8 | flagellar biosynthesis protein R (NCBI) | compare |
| b2579 | yfiD | +0.5 | 1.7 | pyruvate formate lyase subunit (NCBI) | compare |
| b1669 | ydhT | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b0705 | ybfL | +0.5 | 0.4 | putative receptor protein (VIMSS) | compare |
| b1536 | ydeI | +0.5 | 0.4 | hypothetical protein (NCBI) | compare |
| b1505 | ydeT | +0.5 | 0.5 | hypothetical protein (RefSeq) | compare |
| b1138 | ymfE | +0.5 | 1.1 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1258 | yciF | +0.5 | 0.5 | hypothetical protein (NCBI) | compare |
| b3037 | ygiB | +0.5 | 3.1 | conserved outer membrane protein (RefSeq) | compare |
| b1362 | rzpR | +0.5 | 1.8 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b1348 | lar | +0.5 | 1.1 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b4458 | oxyS | +0.5 | 0.8 | global regulatory RNA (NCBI) | compare |
| b1742 | b1742 | +0.5 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1551 | b1551 | +0.5 | 0.3 | orf, hypothetical protein (VIMSS) | compare |
| b1734 | chbF | +0.4 | 2.9 | cryptic phospho-beta-glucosidase, NAD(P)-binding (NCBI) | compare |
| b1085 | b1085 | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b0101 | yacG | +0.4 | 2.2 | zinc-binding protein (NCBI) | compare |
| b1490 | yddV | +0.4 | 2.3 | predicted diguanylate cyclase (RefSeq) | compare |
| b0730 | mngR | +0.4 | 0.8 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b1762 | b1762 | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1530 | marR | +0.4 | 1.7 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b1407 | ydbD | +0.4 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b4631 | ykgQ | +0.4 | 1.3 | no description | compare |
| b1686 | ydiI | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b1733 | chbG | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b1503 | ydeR | +0.4 | 1.6 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b4551 | yheV | +0.4 | 2.3 | hypothetical protein (NCBI) | compare |
| b1839 | yebY | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b2859 | ygeO | +0.4 | 1.3 | hypothetical protein (RefSeq) | compare |
| b2853 | ygeI | +0.4 | 0.2 | hypothetical protein (NCBI) | compare |
| b1025 | ycdT | +0.4 | 0.8 | predicted diguanylate cyclase (NCBI) | compare |
| b0450 | glnK | +0.4 | 1.9 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b4592 | yccB | +0.4 | 1.5 | hypothetical protein (RefSeq) | compare |
| b0682 | ybfN | +0.4 | 2.7 | predicted lipoprotein (NCBI) | compare |
| b1984 | asnW | +0.4 | 0.8 | tRNA-Asn (NCBI) | compare |
| b2221 | atoD | +0.4 | 1.6 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b3624 | rfaZ | +0.4 | 1.6 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4503 | yafF | +0.4 | 0.7 | no description | compare |
| b4585 | sroB | +0.4 | 0.9 | Novel sRNA, function unknown (RefSeq) | compare |
| b2934 | cmtB | +0.4 | 0.3 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b2532 | yfhQ | +0.4 | 2.4 | predicted methyltransferase (NCBI) | compare |
| b0946 | ycbW | +0.4 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b1461 | ydcE | +0.4 | 1.4 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b2051 | wcaH | +0.4 | 1.2 | GDP-mannose mannosyl hydrolase (VIMSS) | compare |
| b1431 | ydcL | +0.4 | 1.6 | predicted lipoprotein (NCBI) | compare |
| b1144 | ymfJ | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1330 | ynaI | +0.4 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b1954 | dsrA | +0.4 | 1.4 | regulatory antisense RNA (NCBI) | compare |
| b1729 | ydjN | +0.4 | 1.2 | predicted transporter (NCBI) | compare |
| b3443 | yrhA | +0.4 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4702 | mgtL | +0.4 | 1.3 | regulatory leader peptide for mgtA (NCBI) | compare |
| b0641 | rlpB | +0.4 | 1.1 | minor lipoprotein (NCBI) | compare |
| b3120 | yhaB | +0.4 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2804 | fucU | +0.4 | 1.1 | L-fucose mutarotase (NCBI) | compare |
| b4497 | yeeL | +0.4 | 0.4 | no description | compare |
| b1502 | ydeQ | +0.3 | 0.8 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b1563 | relE | +0.3 | 0.8 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b4648 | ysaC | +0.3 | 1.9 | no description | compare |
| b4642 | yoeD | +0.3 | 0.7 | no description | compare |
| b1415 | aldA | +0.3 | 2.1 | Lactaldehyde / glycolaldehyde dehydrogenase aldA (EC 1.2.1.22; EC 1.2.1.21) (from data) | compare |
| b4045 | yjbJ | +0.3 | 1.5 | predicted stress response protein (NCBI) | compare |
| b4653 | yicT | +0.3 | 1.5 | no description | compare |
| b2399 | yfeD | +0.3 | 1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2486 | hyfF | +0.3 | 2.4 | NADH dehydrogenase subunit N (NCBI) | compare |
| b2506 | yfgI | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b0926 | ycbK | +0.3 | 2.5 | hypothetical protein (NCBI) | compare |
| b1130 | phoP | +0.3 | 0.4 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b1789 | yeaL | +0.3 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b1566 | flxA | +0.3 | 1.3 | Qin prophage; predicted protein (NCBI) | compare |
| b0406 | tgt | +0.3 | 1.8 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b1877 | yecT | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1337 | abgB | +0.3 | 1.7 | predicted peptidase, aminobenzoyl-glutamate utilization protein (NCBI) | compare |
| b0456 | ybaA | +0.3 | 1.2 | hypothetical protein (NCBI) | compare |
| b2074 | b2074 | +0.3 | 2.1 | putative membrane protein (VIMSS) | compare |
| b4695 | ykgT | +0.3 | 0.9 | no description | compare |
| b1712 | ihfA | +0.3 | 0.2 | integration host factor subunit alpha (NCBI) | compare |
| b1656 | sodB | +0.3 | 1.1 | superoxide dismutase, Fe (NCBI) | compare |
| b1902 | yecI | +0.3 | 1.8 | predicted ferritin-like protein (NCBI) | compare |
| b3021 | ygiT | +0.3 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4543 | ypaA | +0.3 | 1.7 | predicted protein (NCBI) | compare |
| b1344 | ydaO | +0.3 | 0.7 | predicted C32 tRNA thiolase (NCBI) | compare |
| b1730 | ydjO | +0.3 | 0.4 | predicted protein (RefSeq) | compare |
| b2356 | yfdM | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2363 | yfdT | +0.3 | 1.0 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b2264 | menD | +0.3 | 2.4 | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase (NCBI) | compare |
| b1919 | yedO | +0.3 | 1.8 | putative 1-aminocyclopropane-1-carboxylate deaminase (VIMSS) | compare |
| b1579 | intQ | +0.3 | 0.9 | Qin prophage; predicted defective integrase (RefSeq) | compare |
| b3169 | nusA | +0.3 | 0.9 | transcription elongation factor NusA (NCBI) | compare |
| b1172 | ymgG | +0.3 | 1.7 | conserved protein, UPF0757 family (RefSeq) | compare |
| b1152 | ymfP | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2935 | tktA | +0.3 | 0.7 | transketolase 1, thiamin-binding (NCBI) | compare |
| b1462 | b1462 | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1514 | lsrC | +0.3 | 1.1 | AI2 transporter (NCBI) | compare |
| b0611 | rna | +0.3 | 1.7 | ribonuclease I (NCBI) | compare |
| b1790 | yeaM | +0.3 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2998 | yghW | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b1785 | yeaI | +0.3 | 0.9 | predicted diguanylate cyclase (NCBI) | compare |
| b0439 | lon | +0.3 | 1.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b0388 | aroL | +0.3 | 2.0 | shikimate kinase II (NCBI) | compare |
| b2368 | emrK | +0.3 | 2.3 | EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component (NCBI) | compare |
| b1129 | phoQ | +0.3 | 0.4 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b4513 | kdpF | +0.3 | 0.9 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2587 | kgtP | +0.3 | 1.7 | alpha-ketoglutarate transporter (NCBI) | compare |
| b4277 | yjgZ | +0.3 | 1.8 | KpLE2 phage-like element; predicted protein (NCBI) | compare |
| b3973 | birA | +0.3 | 1.3 | biotin--protein ligase (NCBI) | compare |
| b4609 | ryfD | +0.3 | 1.6 | Novel sRNA, function unknown (RefSeq) | compare |
| b1548 | nohA | +0.3 | 0.6 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b0736 | ybgC | +0.3 | 1.0 | predicted acyl-CoA thioesterase (NCBI) | compare |
| b2293 | yfbT | +0.3 | 1.2 | putative phosphatase (VIMSS) | compare |
| b0843 | ybjH | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b1751 | ydjY | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1045 | ymdB | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b2682 | ygaZ | +0.3 | 1.8 | predicted transporter (NCBI) | compare |
| b1325 | ycjG | +0.3 | 1.3 | putative muconate cycloisomerase I (EC 5.5.-.-) (VIMSS) | compare |
| b1792 | yeaO | +0.3 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b3153 | yhbO | +0.3 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2359 | yfdP | +0.3 | 1.5 | CPS-53 (KpLE1) prophage; predicted protein (RefSeq) | compare |
| b2698 | recX | +0.3 | 1.1 | RecA regulator RecX (NCBI) | compare |
| b0927 | ycbL | +0.3 | 1.0 | predicted metal-binding enzyme (NCBI) | compare |
| b0934 | ycbM | +0.3 | 1.1 | putative transport system permease protein (VIMSS) | compare |
| b4596 | yciZ | +0.3 | 0.5 | hypothetical protein (RefSeq) | compare |
| b4573 | insZ | +0.3 | 1.4 | no description | compare |
| b4522 | yciX_1 | +0.3 | 1.0 | hypothetical protein (NCBI) | compare |
| b1408 | b1408 | +0.3 | 1.4 | probable enzyme (VIMSS) | compare |
| b3027 | ygiZ | +0.3 | 0.1 | conserved inner membrane protein (NCBI) | compare |
| b2618 | b2618 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b3074 | ygjH | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b1143 | ymfI | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1007 | b1007 | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0247 | ykfG | +0.3 | 0.7 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b0521 | ybcF | +0.3 | 1.5 | predicted carbamate kinase (NCBI) | compare |
| b4431 | rprA | +0.3 | 0.7 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3908 | sodA | +0.3 | 1.8 | superoxide dismutase, manganese (VIMSS) | compare |
| b2582 | trxC | +0.3 | 1.5 | thioredoxin 2 (NCBI) | compare |
| b2510 | b2510 | +0.3 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b1581 | rspA | +0.2 | 0.9 | predicted dehydratase (NCBI) | compare |
| b1423 | ydcJ | +0.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b0269 | yagF | +0.2 | 2.0 | CP4-6 prophage; predicted dehydratase (NCBI) | compare |
| b1139 | lit | +0.2 | 1.2 | e14 prophage; cell death peptidase, inhibitor of T4 late gene expression (NCBI) | compare |
| b1550 | b1550 | +0.2 | 0.4 | orf, hypothetical protein (VIMSS) | compare |
| b2163 | yeiL | +0.2 | 1.5 | putative transcriptional regulator (VIMSS) | compare |
| b0193 | yaeF | +0.2 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0192 | nlpE | +0.2 | 1.7 | lipoprotein involved with copper homeostasis and adhesion (NCBI) | compare |
| b4627 | ykfL | +0.2 | 1.1 | no description | compare |
| b1610 | tus | +0.2 | 1.0 | DNA replication terminus site-binding protein (NCBI) | compare |
| b4687 | shoB | +0.2 | 1.6 | toxic membrane protein (RefSeq) | compare |
| b2083 | yegZ | +0.2 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2202 | napC | +0.2 | 1.1 | nitrate reductase, cytochrome c-type, periplasmic (NCBI) | compare |
| b2023 | hisH | +0.2 | 1.5 | imidazole glycerol phosphate synthase subunit HisH (NCBI) | compare |
| b3555 | yiaG | +0.2 | 1.6 | predicted transcriptional regulator (NCBI) | compare |
| b2876 | b2876 | +0.2 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2263 | yfbB | +0.2 | 1.0 | predicted peptidase (NCBI) | compare |
| b4152 | frdC | +0.2 | 1.6 | fumarate reductase subunit C (NCBI) | compare |
| b1418 | cybB | +0.2 | 0.5 | cytochrome b(561) (VIMSS) | compare |