| | gene | name | fitness | t score | description | |
|---|
| b2904 | gcvH | +4.0 | 13.7 | glycine cleavage system protein H (NCBI) | compare |
| b2903 | gcvP | +3.3 | 26.7 | glycine dehydrogenase (NCBI) | compare |
| b2905 | gcvT | +2.7 | 16.7 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b4402 | yjjY | +1.9 | 2.4 | hypothetical protein (NCBI) | compare |
| b1332 | ynaJ | +1.8 | 1.6 | predicted inner membrane protein (NCBI) | compare |
| b2808 | gcvA | +1.8 | 9.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4163 | glyV | +1.6 | 2.3 | tRNA-Gly (NCBI) | compare |
| b1506 | yneL | +1.4 | 1.9 | predicted transcriptional regulator (NCBI) | compare |
| b2951 | yggS | +1.4 | 5.4 | predicted enzyme (NCBI) | compare |
| b3806 | cyaA | +1.3 | 6.3 | adenylate cyclase (NCBI) | compare |
| b4701 | sokX | +1.3 | 1.2 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4505 | insX | +1.3 | 2.5 | predicted IS protein (RefSeq) | compare |
| b2209 | eco | +1.3 | 2.0 | ecotin precursor (NCBI) | compare |
| b2783 | chpR | +1.2 | 2.0 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b2688 | gshA | +1.2 | 7.2 | glutamate--cysteine ligase (NCBI) | compare |
| b2642 | yfjW | +1.2 | 1.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0728 | sucC | +1.1 | 6.4 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b2947 | gshB | +1.1 | 5.1 | glutathione synthetase (NCBI) | compare |
| b4203 | rplI | +1.1 | 5.2 | 50S ribosomal protein L9 (NCBI) | compare |
| b4568 | ytjA | +1.0 | 2.6 | predicted protein (RefSeq) | compare |
| b2141 | yohJ | +1.0 | 2.3 | hypothetical protein (NCBI) | compare |
| b4431 | rprA | +1.0 | 2.6 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3194 | yrbE | +1.0 | 4.8 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4647 | mokA | +1.0 | 0.8 | no description | compare |
| b4294 | insA-7 | +1.0 | 2.4 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b4503 | yafF | +1.0 | 1.3 | no description | compare |
| b4394 | yjjX | +0.9 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1290 | sapF | +0.9 | 1.7 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4144 | yjeI | +0.9 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1724 | ydiZ | +0.9 | 1.3 | hypothetical protein (NCBI) | compare |
| b3778 | rep | +0.9 | 5.6 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4410 | ecnA | +0.9 | 1.5 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b2635 | ypjK | +0.9 | 2.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b2846 | yqeH | +0.9 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b2279 | nuoK | +0.9 | 1.2 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3863 | polA | +0.9 | 1.4 | DNA polymerase I (NCBI) | compare |
| b0729 | sucD | +0.9 | 3.0 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3426 | glpD | +0.9 | 3.0 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2221 | atoD | +0.9 | 3.6 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b1620 | malI | +0.9 | 1.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2080 | b2080 | +0.9 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0627 | tatE | +0.9 | 1.8 | twin arginine translocase protein E (NCBI) | compare |
| b2258 | b2258 | +0.8 | 1.2 | putative transport/receptor protein (VIMSS) | compare |
| b4552 | yrhC | +0.8 | 1.0 | no description | compare |
| b1426 | ydcH | +0.8 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2817 | b2817 | +0.8 | 3.9 | putative amidase (VIMSS) | compare |
| b1150 | ymfR | +0.8 | 1.0 | e14 prophage; predicted protein (NCBI) | compare |
| b1273 | yciN | +0.8 | 1.7 | hypothetical protein (NCBI) | compare |
| b1412 | azoR | +0.8 | 1.5 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b0688 | pgm | +0.8 | 2.8 | phosphoglucomutase (NCBI) | compare |
| b1360 | ydaV | +0.8 | 1.5 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b1524 | yneH | +0.8 | 0.8 | predicted glutaminase (NCBI) | compare |
| b1667 | ydhR | +0.7 | 1.5 | hypothetical protein (NCBI) | compare |
| b1493 | gadB | +0.7 | 0.8 | glutamate decarboxylase B, PLP-dependent (NCBI) | compare |
| b1686 | ydiI | +0.7 | 1.4 | hypothetical protein (NCBI) | compare |
| b1824 | yobF | +0.7 | 1.7 | hypothetical protein (NCBI) | compare |
| b4641 | yoeH | +0.7 | 2.6 | no description | compare |
| b2910 | zapA | +0.7 | 2.8 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b4435 | isrC | +0.7 | 1.4 | unknown RNA (NCBI) | compare |
| b0998 | torD | +0.7 | 0.9 | chaperone protein TorD (NCBI) | compare |
| b2948 | yqgE | +0.7 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4012 | yjaB | +0.7 | 2.0 | predicted acetyltransferase (NCBI) | compare |
| b1095 | fabF | +0.7 | 4.3 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1939 | fliG | +0.7 | 3.1 | flagellar motor switch protein G (NCBI) | compare |
| b4656 | yjhY | +0.7 | 2.0 | no description | compare |
| b3842 | rfaH | +0.7 | 3.4 | transcriptional activator RfaH (NCBI) | compare |
| b1006 | ycdG | +0.7 | 3.5 | putative transport protein (VIMSS) | compare |
| b3005 | exbD | +0.7 | 3.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b1434 | ydcN | +0.7 | 0.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2823 | ppdC | +0.7 | 3.4 | hypothetical protein (NCBI) | compare |
| b4592 | yccB | +0.7 | 1.2 | hypothetical protein (RefSeq) | compare |
| b4260 | pepA | +0.6 | 4.3 | leucyl aminopeptidase (NCBI) | compare |
| b4407 | thiS | +0.6 | 1.7 | sulfur carrier protein ThiS (NCBI) | compare |
| b3119 | tdcR | +0.6 | 1.4 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b4702 | mgtL | +0.6 | 1.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1841 | yobA | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b1636 | pdxY | +0.6 | 2.8 | pyridoxine kinase (NCBI) | compare |
| b1482 | osmC | +0.6 | 1.2 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b2450 | yffS | +0.6 | 2.0 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2480 | bcp | +0.6 | 1.9 | thioredoxin-dependent thiol peroxidase (NCBI) | compare |
| b1630 | rsxD | +0.6 | 2.6 | electron transport complex protein RnfD (NCBI) | compare |
| b1758 | b1758 | +0.6 | 1.0 | putative cytochrome oxidase (VIMSS) | compare |
| b2437 | yfeG | +0.6 | 3.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1335 | ogt | +0.6 | 2.1 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b1235 | rssB | +0.6 | 2.6 | response regulator of RpoS (NCBI) | compare |
| b1441 | ydcT | +0.6 | 2.1 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b0323 | yahI | +0.6 | 3.6 | predicted carbamate kinase-like protein (NCBI) | compare |
| b2488 | hyfH | +0.6 | 2.4 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b1920 | fliY | +0.6 | 1.7 | cystine transporter subunit (NCBI) | compare |
| b1660 | ydhC | +0.6 | 2.6 | predicted transporter (NCBI) | compare |
| b4373 | rimI | +0.6 | 1.5 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1236 | galU | +0.6 | 3.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3163 | nlpI | +0.6 | 1.8 | hypothetical protein (NCBI) | compare |
| b4653 | yicT | +0.6 | 0.9 | no description | compare |
| b2830 | nudH | +0.6 | 0.7 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0339 | cynT | +0.6 | 2.3 | carbonic anhydrase (NCBI) | compare |
| b2064 | asmA | +0.6 | 3.2 | predicted assembly protein (NCBI) | compare |
| b1925 | fliS | +0.6 | 2.4 | flagellar protein FliS (NCBI) | compare |
| b1479 | sfcA | +0.6 | 2.2 | NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) | compare |
| b0059 | hepA | +0.6 | 4.7 | ATP-dependent helicase HepA (NCBI) | compare |
| b1752 | ydjZ | +0.6 | 1.7 | conserved inner membrane protein (NCBI) | compare |
| b1849 | purT | +0.6 | 2.4 | phosphoribosylglycinamide formyltransferase 2 (NCBI) | compare |
| b1668 | ydhS | +0.6 | 2.2 | conserved protein with FAD/NAD(P)-binding domain (NCBI) | compare |
| b2301 | yfcF | +0.6 | 2.1 | predicted enzyme (NCBI) | compare |
| b4174 | hflK | +0.6 | 3.9 | modulator for HflB protease specific for phage lambda cII repressor (NCBI) | compare |
| b3836 | b3836 | +0.6 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b3929 | rraA | +0.5 | 3.9 | ribonuclease activity regulator protein RraA (NCBI) | compare |
| b4097 | phnK | +0.5 | 1.9 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b3677 | yidI | +0.5 | 3.8 | predicted inner membrane protein (NCBI) | compare |
| b3632 | rfaQ | +0.5 | 4.6 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4232 | fbp | +0.5 | 3.6 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b2829 | ptsP | +0.5 | 4.2 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b2421 | cysM | +0.5 | 2.2 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b4622 | ytcA | +0.5 | 1.8 | hypothetical protein (RefSeq) | compare |
| b1082 | flgK | +0.5 | 2.5 | flagellar hook-associated protein K (NCBI) | compare |
| b2453 | eutG | +0.5 | 3.0 | ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase (VIMSS) | compare |
| b0424 | thiJ | +0.5 | 2.6 | 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis (VIMSS) | compare |
| b1868 | yecE | +0.5 | 1.6 | hypothetical protein (NCBI) | compare |
| b0549 | ybcO | +0.5 | 1.2 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3149 | yraO | +0.5 | 2.3 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b4692 | oweE | +0.5 | 1.5 | no description | compare |
| b2572 | rseA | +0.5 | 1.8 | anti-sigma factor (NCBI) | compare |
| b2811 | ygdK | +0.5 | 1.7 | predicted Fe-S metabolism protein (NCBI) | compare |
| b0580 | ybdJ | +0.5 | 0.6 | predicted inner membrane protein (NCBI) | compare |
| b1948 | fliP | +0.5 | 2.6 | flagellar biosynthesis protein P (NCBI) | compare |
| b4104 | phnE | +0.5 | 1.8 | phosphonate/organophosphate ester transporter subunit (NCBI) | compare |
| b3181 | greA | +0.5 | 2.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b4544 | yfbW | +0.5 | 1.4 | hypothetical protein (NCBI) | compare |
| b2419 | yfeK | +0.5 | 1.2 | hypothetical protein (NCBI) | compare |
| b1606 | folM | +0.5 | 3.2 | short chain dehydrogenase (NCBI) | compare |
| b4679 | yohP | +0.5 | 1.3 | expressed protein (RefSeq) | compare |
| b0296 | ykgM | +0.5 | 1.5 | 50S ribosomal protein L31 (NCBI) | compare |
| b1155 | ymfS | +0.5 | 2.1 | e14 prophage; predicted protein (NCBI) | compare |
| b4536 | yobH | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b4416 | rybA | +0.5 | 0.9 | unknown RNA (NCBI) | compare |
| b3148 | yraN | +0.5 | 1.9 | hypothetical protein (NCBI) | compare |
| b2073 | yegL | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b1854 | pykA | +0.5 | 3.3 | pyruvate kinase (NCBI) | compare |
| b0490 | ybbL | +0.5 | 2.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1370 | insH-5 | +0.5 | 1.3 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b4093 | phnO | +0.5 | 2.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b1952 | dsrB | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1446 | ydcY | +0.5 | 1.0 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | +0.5 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1110 | ycfJ | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1830 | prc | +0.5 | 2.4 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2384 | ypdE | +0.5 | 2.8 | predicted peptidase (NCBI) | compare |
| b2134 | pbpG | +0.5 | 2.3 | penicillin-binding protein 7 (VIMSS) | compare |
| b1953 | b1953 | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1884 | cheR | +0.5 | 3.0 | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | compare |
| b3617 | kbl | +0.5 | 2.6 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2104 | thiM | +0.5 | 1.1 | hydroxyethylthiazole kinase (NCBI) | compare |
| b3351 | kefG | +0.5 | 2.9 | glutathione-regulated potassium-efflux system ancillary protein (NCBI) | compare |
| b2504 | yfgG | +0.5 | 0.9 | Negative regulator of nickel and cobalt uptake (YfgG) (from data) | compare |
| b2637 | yfjT | +0.5 | 1.1 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b1923 | fliC | +0.5 | 3.0 | flagellin (NCBI) | compare |
| b2009 | sbmC | +0.5 | 2.1 | DNA gyrase inhibitor (NCBI) | compare |
| b0496 | ybbP | +0.5 | 2.9 | predicted inner membrane protein (NCBI) | compare |
| b1125 | potB | +0.5 | 1.4 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b1205 | ychH | +0.5 | 1.2 | predicted inner membrane protein (NCBI) | compare |
| b3198 | kdsC | +0.5 | 1.2 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2125 | yehT | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2168 | fruK | +0.5 | 0.7 | 1-phosphofructokinase (NCBI) | compare |
| b0268 | yagE | +0.4 | 1.9 | 2-keto-3-deoxy gluconate (KDG) aldolase; CP4-6 prophage (NCBI) | compare |
| b0483 | ybaQ | +0.4 | 3.1 | orf, hypothetical protein (VIMSS) | compare |
| b1806 | yeaY | +0.4 | 1.8 | predicted lipoprotein (NCBI) | compare |
| b3206 | npr | +0.4 | 2.4 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b2645 | yfjZ | +0.4 | 1.8 | CP4-57 prophage; antitoxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1818 | manY | +0.4 | 0.9 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1817 | manX | +0.4 | 1.9 | fused mannose-specific PTS enzymes: IIA component/IIB component (NCBI) | compare |
| b1792 | yeaO | +0.4 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2079 | baeR | +0.4 | 1.6 | DNA-binding response regulator in two-component regulatory system with BaeS (NCBI) | compare |
| b1802 | yeaW | +0.4 | 2.1 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b2101 | yegW | +0.4 | 2.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0356 | frmA | +0.4 | 2.3 | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) | compare |
| b4532 | yncN | +0.4 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2699 | recA | +0.4 | 0.7 | recombinase A (NCBI) | compare |
| b2899 | yqfA | +0.4 | 2.0 | predicted oxidoreductase, inner membrane subunit (NCBI) | compare |
| b4450 | arcZ | +0.4 | 1.0 | sRNA antisense regulator of tpx and sdaA, Hfq-dependent (RefSeq) | compare |
| b2883 | guaD | +0.4 | 1.9 | guanine deaminase (NCBI) | compare |
| b0927 | ycbL | +0.4 | 1.5 | predicted metal-binding enzyme (NCBI) | compare |
| b2066 | udk | +0.4 | 1.7 | uridine/cytidine kinase (VIMSS) | compare |
| b2393 | nupC | +0.4 | 2.2 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b2704 | srlB | +0.4 | 0.9 | glucitol/sorbitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0548 | ninE | +0.4 | 1.2 | DLP12 prophage; conserved protein (NCBI) | compare |
| b4385 | yjjJ | +0.4 | 2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1961 | dcm | +0.4 | 0.9 | DNA cytosine methylase (NCBI) | compare |
| b2317 | dedA | +0.4 | 1.5 | conserved inner membrane protein (NCBI) | compare |
| b0979 | appB | +0.4 | 2.0 | cytochrome bd-II oxidase, subunit II (NCBI) | compare |
| b0830 | yliB | +0.4 | 2.7 | predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b3404 | envZ | +0.4 | 2.6 | osmolarity sensor protein (NCBI) | compare |
| b1308 | pspE | +0.4 | 2.2 | thiosulfate:cyanide sulfurtransferase (rhodanese) (NCBI) | compare |
| b1064 | grxB | +0.4 | 2.6 | glutaredoxin 2 (Grx2) (NCBI) | compare |
| b1468 | narZ | +0.4 | 2.6 | nitrate reductase 2 (NRZ), alpha subunit (NCBI) | compare |
| b0480 | ushA | +0.4 | 2.1 | UDP-sugar hydrolase (NCBI) | compare |
| b4603 | rseX | +0.4 | 0.4 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b3188 | sfsB | +0.4 | 1.8 | DNA-binding transcriptional activator of maltose metabolism (NCBI) | compare |
| b2550 | yphH | +0.4 | 1.8 | putative NAGC-like transcriptional regulator (VIMSS) | compare |
| b0966 | hspQ | +0.4 | 1.8 | DNA-binding protein, hemimethylated (RefSeq) | compare |
| b1989 | asnV | +0.4 | 1.1 | tRNA-Asn (NCBI) | compare |