| | gene | name | fitness | t score | description | |
|---|
| b2904 | gcvH | +4.3 | 13.0 | glycine cleavage system protein H (NCBI) | compare |
| b3035 | tolC | +4.2 | 28.2 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b2829 | ptsP | +3.8 | 25.1 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3206 | npr | +3.7 | 18.5 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b2903 | gcvP | +3.6 | 31.4 | glycine dehydrogenase (NCBI) | compare |
| b2144 | sanA | +3.5 | 27.1 | hypothetical protein (NCBI) | compare |
| b2905 | gcvT | +3.3 | 21.0 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b0632 | dacA | +3.3 | 18.7 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b3405 | ompR | +3.2 | 12.6 | osmolarity response regulator (NCBI) | compare |
| b1830 | prc | +3.1 | 16.6 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3082 | ygjM | +3.1 | 4.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3911 | cpxA | +3.0 | 21.5 | two-component sensor protein (NCBI) | compare |
| b0437 | clpP | +2.9 | 12.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1677 | lpp | +2.9 | 14.8 | murein lipoprotein (NCBI) | compare |
| b3784 | rfe | +2.8 | 22.9 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3787 | rffD | +2.7 | 21.0 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b0438 | clpX | +2.7 | 14.6 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2572 | rseA | +2.7 | 4.9 | anti-sigma factor (NCBI) | compare |
| b3199 | yrbK | +2.6 | 10.1 | hypothetical protein (NCBI) | compare |
| b3404 | envZ | +2.6 | 15.8 | osmolarity sensor protein (NCBI) | compare |
| b2808 | gcvA | +2.6 | 9.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2188 | yejM | +2.5 | 14.5 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3786 | rffE | +2.5 | 20.5 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b2951 | yggS | +2.4 | 11.9 | predicted enzyme (NCBI) | compare |
| b3794 | rffM | +2.4 | 18.2 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b0178 | hlpA | +2.4 | 10.5 | periplasmic chaperone (NCBI) | compare |
| b4042 | dgkA | +2.3 | 5.2 | diacylglycerol kinase (NCBI) | compare |
| b2064 | asmA | +2.3 | 8.3 | predicted assembly protein (NCBI) | compare |
| b1332 | ynaJ | +2.2 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b2830 | nudH | +2.1 | 4.3 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2017 | yefM | +2.1 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b3021 | ygiT | +2.1 | 3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3261 | fis | +2.1 | 8.0 | DNA-binding protein Fis (NCBI) | compare |
| b3164 | pnp | +2.0 | 6.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2742 | nlpD | +2.0 | 11.1 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4402 | yjjY | +1.9 | 1.8 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | +1.9 | 10.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b4169 | amiB | +1.8 | 12.7 | N-acetylmuramoyl-l-alanine amidase II (NCBI) | compare |
| b1607 | ydgC | +1.8 | 2.2 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4505 | insX | +1.8 | 2.2 | predicted IS protein (RefSeq) | compare |
| b3621 | rfaC | +1.8 | 8.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0092 | ddlB | +1.8 | 6.0 | D-alanylalanine synthetase (NCBI) | compare |
| b3791 | rffA | +1.7 | 10.6 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b3790 | rffC | +1.7 | 7.6 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b4592 | yccB | +1.7 | 1.6 | hypothetical protein (RefSeq) | compare |
| b4000 | hupA | +1.7 | 7.9 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3341 | rpsG | +1.7 | 2.4 | 30S ribosomal protein S7 (NCBI) | compare |
| b3052 | rfaE | +1.7 | 7.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3163 | nlpI | +1.7 | 5.8 | hypothetical protein (NCBI) | compare |
| b3529 | yhjK | +1.6 | 11.8 | predicted diguanylate cyclase (RefSeq) | compare |
| b0677 | nagA | +1.6 | 7.1 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4426 | isrA | +1.6 | 3.1 | unknown RNA (NCBI) | compare |
| b0059 | hepA | +1.6 | 12.4 | ATP-dependent helicase HepA (NCBI) | compare |
| b3387 | dam | +1.6 | 11.5 | DNA adenine methylase (NCBI) | compare |
| b0695 | kdpD | +1.6 | 5.6 | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) | compare |
| b0222 | lpcA | +1.6 | 3.9 | phosphoheptose isomerase (NCBI) | compare |
| b4203 | rplI | +1.5 | 4.9 | 50S ribosomal protein L9 (NCBI) | compare |
| b1273 | yciN | +1.5 | 2.7 | hypothetical protein (NCBI) | compare |
| b3620 | rfaF | +1.5 | 8.2 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0053 | surA | +1.5 | 8.9 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1293 | sapB | +1.4 | 2.5 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3107 | yhaL | +1.4 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1709 | btuD | +1.4 | 1.3 | vitamin B12-transporter ATPase (NCBI) | compare |
| b3150 | yraP | +1.4 | 6.7 | hypothetical protein (NCBI) | compare |
| b3655 | yicH | +1.4 | 11.5 | hypothetical protein (NCBI) | compare |
| b2516 | yfgA | +1.4 | 7.0 | hypothetical protein (NCBI) | compare |
| b3778 | rep | +1.4 | 6.3 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1754 | b1754 | +1.3 | 3.0 | orf, hypothetical protein (VIMSS) | compare |
| b1291 | sapD | +1.3 | 1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3619 | rfaD | +1.3 | 6.1 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b4593 | ymgI | +1.3 | 1.4 | hypothetical protein (RefSeq) | compare |
| b3443 | yrhA | +1.3 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3472 | b3472 | +1.3 | 9.1 | orf, hypothetical protein (VIMSS) | compare |
| b3920 | yiiQ | +1.3 | 7.5 | hypothetical protein (NCBI) | compare |
| b4545 | ypdJ | +1.3 | 1.9 | no description | compare |
| b2688 | gshA | +1.3 | 6.7 | glutamate--cysteine ligase (NCBI) | compare |
| b3785 | wzzE | +1.2 | 8.5 | putative transport protein (VIMSS) | compare |
| b2175 | spr | +1.2 | 3.2 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3630 | rfaP | +1.2 | 8.4 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0866 | ybjQ | +1.2 | 1.5 | hypothetical protein (NCBI) | compare |
| b3631 | rfaG | +1.2 | 9.2 | glucosyltransferase I (NCBI) | compare |
| b0990 | cspG | +1.1 | 1.1 | DNA-binding transcriptional regulator (NCBI) | compare |
| b2362 | yfdS | +1.1 | 3.4 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b3935 | priA | +1.1 | 0.9 | primosome assembly protein PriA (NCBI) | compare |
| b1818 | manY | +1.1 | 3.1 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b0502 | ylbG | +1.1 | 1.5 | no description | compare |
| b2426 | ucpA | +1.1 | 1.1 | putative oxidoreductase (VIMSS) | compare |
| b3842 | rfaH | +1.1 | 4.7 | transcriptional activator RfaH (NCBI) | compare |
| b1630 | rsxD | +1.1 | 3.7 | electron transport complex protein RnfD (NCBI) | compare |
| b3260 | dusB | +1.1 | 4.4 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b1380 | ldhA | +1.0 | 2.5 | D-lactate dehydrogenase (NCBI) | compare |
| b2817 | b2817 | +1.0 | 4.1 | putative amidase (VIMSS) | compare |
| b1861 | ruvA | +1.0 | 1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1824 | yobF | +1.0 | 4.4 | hypothetical protein (NCBI) | compare |
| b1741 | ydjQ | +1.0 | 2.4 | endonuclease of nucleotide excision repair (NCBI) | compare |
| b1575 | dicB | +1.0 | 1.4 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3652 | recG | +1.0 | 6.0 | ATP-dependent DNA helicase (NCBI) | compare |
| b1855 | lpxM | +1.0 | 3.1 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3102 | yqjG | +1.0 | 2.3 | predicted S-transferase (NCBI) | compare |
| b3806 | cyaA | +1.0 | 3.9 | adenylate cyclase (NCBI) | compare |
| b2540 | hcaC | +1.0 | 2.4 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) | compare |
| b2313 | cvpA | +1.0 | 1.3 | membrane protein required for colicin V production (NCBI) | compare |
| b3229 | sspA | +0.9 | 2.8 | stringent starvation protein A (NCBI) | compare |
| b1085 | b1085 | +0.9 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2937 | speB | +0.9 | 4.3 | agmatinase (NCBI) | compare |
| b3616 | tdh | +0.9 | 4.3 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b4155 | yjeA | +0.9 | 1.3 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3609 | secB | +0.9 | 1.9 | export protein SecB (NCBI) | compare |
| b0082 | mraW | +0.9 | 2.1 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0882 | clpA | +0.9 | 5.4 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | compare |
| b1095 | fabF | +0.9 | 4.7 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1863 | ruvC | +0.9 | 2.4 | Holliday junction resolvase (NCBI) | compare |
| b2498 | upp | +0.9 | 1.8 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b2110 | yehC | +0.9 | 1.6 | predicted periplasmic pilin chaperone (NCBI) | compare |
| b1186 | nhaB | +0.9 | 4.6 | NhaB sodium/proton transporter (Katherine Huang) | compare |
| b0605 | ahpC | +0.9 | 2.7 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2445 | yffN | +0.9 | 2.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b2768 | ygcP | +0.9 | 1.8 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b2444 | yffM | +0.9 | 2.1 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b3977 | tyrU | +0.9 | 0.9 | tRNA-Tyr (NCBI) | compare |
| b2947 | gshB | +0.9 | 3.3 | glutathione synthetase (NCBI) | compare |
| b1159 | mcrA | +0.9 | 1.3 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b2221 | atoD | +0.9 | 1.5 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b4410 | ecnA | +0.8 | 1.0 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1438 | ydcQ | +0.8 | 2.1 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2212 | alkB | +0.8 | 1.8 | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions (NCBI) | compare |
| b2297 | pta | +0.8 | 0.5 | phosphate acetyltransferase (NCBI) | compare |
| b2953 | yggU | +0.8 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3625 | rfaY | +0.8 | 3.0 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3181 | greA | +0.8 | 4.2 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1478 | adhP | +0.8 | 1.6 | alcohol dehydrogenase (VIMSS) | compare |
| b1542 | ydfI | +0.8 | 2.1 | predicted mannonate dehydrogenase (NCBI) | compare |
| b4535 | yniD | +0.8 | 0.6 | predicted protein (RefSeq) | compare |
| b1524 | yneH | +0.8 | 0.7 | predicted glutaminase (NCBI) | compare |
| b1685 | ydiH | +0.8 | 1.2 | predicted protein (RefSeq) | compare |
| b1236 | galU | +0.8 | 2.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1290 | sapF | +0.8 | 1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4543 | ypaA | +0.8 | 2.2 | predicted protein (NCBI) | compare |
| b4163 | glyV | +0.8 | 1.0 | tRNA-Gly (NCBI) | compare |
| b0929 | ompF | +0.8 | 3.0 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b4441 | glmY | +0.8 | 1.3 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b2007 | yeeX | +0.8 | 2.9 | conserved protein (RefSeq) | compare |
| b2635 | ypjK | +0.8 | 1.3 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1271 | yciK | +0.8 | 1.7 | short chain dehydrogenase (NCBI) | compare |
| b0759 | galE | +0.8 | 3.5 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b2446 | yffO | +0.8 | 1.2 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b3149 | yraO | +0.8 | 3.0 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |
| b1111 | ycfQ | +0.8 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0296 | ykgM | +0.8 | 1.4 | 50S ribosomal protein L31 (NCBI) | compare |
| b1984 | asnW | +0.8 | 0.9 | tRNA-Asn (NCBI) | compare |
| b4676 | yoaK | +0.7 | 0.4 | expressed protein (RefSeq) | compare |
| b3469 | zntA | +0.7 | 3.7 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b3426 | glpD | +0.7 | 2.4 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b2356 | yfdM | +0.7 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0729 | sucD | +0.7 | 1.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1948 | fliP | +0.7 | 2.0 | flagellar biosynthesis protein P (NCBI) | compare |
| b4294 | insA-7 | +0.7 | 0.6 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b4595 | yciY | +0.7 | 1.7 | hypothetical protein (RefSeq) | compare |
| b2480 | bcp | +0.7 | 2.1 | thioredoxin-dependent thiol peroxidase (NCBI) | compare |
| b2684 | mprA | +0.7 | 2.1 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b1097 | yceG | +0.7 | 3.9 | predicted aminodeoxychorismate lyase (NCBI) | compare |
| b3643 | rph | +0.7 | 2.6 | ribonuclease PH (NCBI) | compare |
| b4646 | yrdE | +0.7 | 1.7 | no description | compare |
| b1563 | relE | +0.7 | 1.1 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b4141 | yjeH | +0.7 | 4.9 | predicted transporter (NCBI) | compare |
| b2433 | b2433 | +0.7 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1324 | tpx | +0.7 | 1.5 | thiol peroxidase (NCBI) | compare |
| b2327 | yfcA | +0.7 | 2.3 | conserved inner membrane protein (NCBI) | compare |
| b0183 | rnhB | +0.7 | 2.0 | ribonuclease HII (NCBI) | compare |
| b1000 | cbpA | +0.7 | 4.4 | curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK (NCBI) | compare |
| b1606 | folM | +0.7 | 3.2 | short chain dehydrogenase (NCBI) | compare |
| b3351 | kefG | +0.7 | 3.7 | glutathione-regulated potassium-efflux system ancillary protein (NCBI) | compare |
| b2513 | yfgM | +0.7 | 2.2 | hypothetical protein (NCBI) | compare |
| b1368 | ynaA | +0.7 | 1.9 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b1426 | ydcH | +0.7 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3153 | yhbO | +0.7 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3527 | yhjJ | +0.7 | 5.5 | predicted zinc-dependent peptidase (NCBI) | compare |
| b1954 | dsrA | +0.7 | 1.8 | regulatory antisense RNA (NCBI) | compare |
| b0436 | tig | +0.7 | 3.3 | trigger factor (NCBI) | compare |
| b4090 | rpiB | +0.7 | 1.2 | ribose-5-phosphate isomerase B (NCBI) | compare |
| b2247 | yfaW | +0.7 | 3.1 | predicted enolase (RefSeq) | compare |
| b1952 | dsrB | +0.7 | 1.4 | hypothetical protein (NCBI) | compare |
| b3769 | ilvM | +0.7 | 2.5 | acetolactate synthase II, small subunit (NCBI) | compare |
| b1566 | flxA | +0.7 | 1.4 | Qin prophage; predicted protein (NCBI) | compare |
| b1961 | dcm | +0.7 | 1.2 | DNA cytosine methylase (NCBI) | compare |
| b1233 | ychJ | +0.7 | 0.9 | hypothetical protein (NCBI) | compare |
| b4649 | ysaD | +0.7 | 1.9 | no description | compare |
| b2910 | zapA | +0.7 | 2.2 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b2263 | yfbB | +0.7 | 1.8 | predicted peptidase (NCBI) | compare |
| b1726 | yniB | +0.6 | 0.7 | predicted inner membrane protein (NCBI) | compare |
| b3628 | rfaB | +0.6 | 3.8 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b0660 | ybeZ | +0.6 | 1.5 | predicted protein with nucleoside triphosphate hydrolase domain (RefSeq) | compare |
| b2963 | mltC | +0.6 | 4.3 | membrane-bound lytic murein transglycosylase C (VIMSS) | compare |
| b1220 | ychO | +0.6 | 1.9 | predicted invasin (RefSeq) | compare |
| b0686 | ybfF | +0.6 | 2.8 | hypothetical protein (NCBI) | compare |
| b2614 | grpE | +0.6 | 1.4 | heat shock protein (NCBI) | compare |
| b0209 | yafD | +0.6 | 2.2 | hypothetical protein (NCBI) | compare |
| b2576 | srmB | +0.6 | 2.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b1066 | rimJ | +0.6 | 1.9 | ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) | compare |
| b3250 | mreC | +0.6 | 0.7 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |