| | gene | name | fitness | t score | description | |
|---|
| b3194 | yrbE | +3.8 | 7.5 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2904 | gcvH | +3.8 | 10.4 | glycine cleavage system protein H (NCBI) | compare |
| b4042 | dgkA | +3.7 | 7.4 | diacylglycerol kinase (NCBI) | compare |
| b3405 | ompR | +3.7 | 11.3 | osmolarity response regulator (NCBI) | compare |
| b2903 | gcvP | +3.6 | 25.3 | glycine dehydrogenase (NCBI) | compare |
| b3021 | ygiT | +3.5 | 4.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2905 | gcvT | +3.4 | 20.9 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b1830 | prc | +3.1 | 17.7 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2144 | sanA | +3.0 | 20.0 | hypothetical protein (NCBI) | compare |
| b2846 | yqeH | +2.9 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3082 | ygjM | +2.8 | 3.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2808 | gcvA | +2.8 | 10.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4647 | mokA | +2.6 | 1.3 | no description | compare |
| b0232 | yafN | +2.5 | 2.2 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3404 | envZ | +2.5 | 13.3 | osmolarity sensor protein (NCBI) | compare |
| b3163 | nlpI | +2.5 | 8.1 | hypothetical protein (NCBI) | compare |
| b2188 | yejM | +2.4 | 11.2 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3164 | pnp | +2.3 | 5.1 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0438 | clpX | +2.3 | 8.3 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2064 | asmA | +2.3 | 10.7 | predicted assembly protein (NCBI) | compare |
| b0632 | dacA | +2.3 | 9.3 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0437 | clpP | +2.3 | 7.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b2894 | xerD | +2.2 | 2.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2017 | yefM | +2.2 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0738 | tolR | +2.1 | 5.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3620 | rfaF | +2.1 | 7.6 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3630 | rfaP | +2.0 | 13.2 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2951 | yggS | +2.0 | 5.5 | predicted enzyme (NCBI) | compare |
| b3261 | fis | +2.0 | 3.3 | DNA-binding protein Fis (NCBI) | compare |
| b2742 | nlpD | +2.0 | 7.8 | predicted outer membrane lipoprotein (NCBI) | compare |
| b0912 | ihfB | +2.0 | 2.9 | integration host factor subunit beta (NCBI) | compare |
| b4169 | amiB | +2.0 | 11.8 | N-acetylmuramoyl-l-alanine amidase II (NCBI) | compare |
| b1824 | yobF | +1.9 | 4.2 | hypothetical protein (NCBI) | compare |
| b1863 | ruvC | +1.9 | 4.6 | Holliday junction resolvase (NCBI) | compare |
| b3341 | rpsG | +1.9 | 1.7 | 30S ribosomal protein S7 (NCBI) | compare |
| b0802 | ybiJ | +1.9 | 2.0 | hypothetical protein (NCBI) | compare |
| b4585 | sroB | +1.8 | 1.9 | Novel sRNA, function unknown (RefSeq) | compare |
| b3842 | rfaH | +1.8 | 5.5 | transcriptional activator RfaH (NCBI) | compare |
| b3199 | yrbK | +1.8 | 3.2 | hypothetical protein (NCBI) | compare |
| b4570 | lomR | +1.7 | 1.9 | no description | compare |
| b4520 | ymgF | +1.7 | 1.8 | hypothetical protein (NCBI) | compare |
| b4546 | ypeB | +1.6 | 1.5 | hypothetical protein (NCBI) | compare |
| b1874 | cutC | +1.6 | 3.1 | copper homeostasis protein (NCBI) | compare |
| b0729 | sucD | +1.6 | 2.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b2939 | yqgB | +1.6 | 1.4 | predicted protein (RefSeq) | compare |
| b3387 | dam | +1.6 | 9.9 | DNA adenine methylase (NCBI) | compare |
| b2688 | gshA | +1.6 | 7.6 | glutamate--cysteine ligase (NCBI) | compare |
| b1108 | ycfP | +1.6 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1273 | yciN | +1.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b4202 | rpsR | +1.5 | 1.4 | 30S ribosomal protein S18 (NCBI) | compare |
| b4203 | rplI | +1.5 | 4.7 | 50S ribosomal protein L9 (NCBI) | compare |
| b2829 | ptsP | +1.5 | 9.1 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b1418 | cybB | +1.5 | 2.4 | cytochrome b(561) (VIMSS) | compare |
| b0706 | ybfD | +1.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b3621 | rfaC | +1.5 | 5.2 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3631 | rfaG | +1.4 | 10.7 | glucosyltransferase I (NCBI) | compare |
| b2684 | mprA | +1.4 | 2.6 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b2291 | yfbR | +1.4 | 4.1 | hypothetical protein (NCBI) | compare |
| b2659 | b2659 | +1.4 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0059 | hepA | +1.4 | 9.7 | ATP-dependent helicase HepA (NCBI) | compare |
| b2830 | nudH | +1.4 | 1.5 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2516 | yfgA | +1.4 | 5.3 | hypothetical protein (NCBI) | compare |
| b0991 | ymcE | +1.4 | 3.9 | cold shock gene (NCBI) | compare |
| b2237 | inaA | +1.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b3652 | recG | +1.3 | 6.2 | ATP-dependent DNA helicase (NCBI) | compare |
| b1778 | yeaA | +1.3 | 1.5 | methionine sulfoxide reductase B (NCBI) | compare |
| b0927 | ycbL | +1.3 | 2.2 | predicted metal-binding enzyme (NCBI) | compare |
| b4215 | ytfI | +1.3 | 2.7 | hypothetical protein (NCBI) | compare |
| b2104 | thiM | +1.3 | 1.2 | hydroxyethylthiazole kinase (NCBI) | compare |
| b1143 | ymfI | +1.3 | 1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0339 | cynT | +1.3 | 2.5 | carbonic anhydrase (NCBI) | compare |
| b3234 | degQ | +1.3 | 5.6 | serine endoprotease, periplasmic (NCBI) | compare |
| b3052 | rfaE | +1.3 | 3.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b2642 | yfjW | +1.3 | 0.8 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b4593 | ymgI | +1.2 | 0.8 | hypothetical protein (RefSeq) | compare |
| b3935 | priA | +1.2 | 1.0 | primosome assembly protein PriA (NCBI) | compare |
| b1754 | b1754 | +1.2 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1589 | ynfG | +1.2 | 1.5 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b3206 | npr | +1.2 | 3.4 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b2352 | yfdI | +1.2 | 1.5 | CPS-53 (KpLE1) prophage; predicted inner membrane protein (NCBI) | compare |
| b1594 | dgsA | +1.2 | 2.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1446 | ydcY | +1.2 | 1.4 | hypothetical protein (NCBI) | compare |
| b4253 | yjgL | +1.2 | 4.2 | orf, hypothetical protein (VIMSS) | compare |
| b1642 | slyA | +1.2 | 1.8 | transcriptional regulator for cryptic hemolysin (VIMSS) | compare |
| b1278 | pgpB | +1.2 | 1.8 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b2646 | ypjF | +1.2 | 2.3 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1153 | ymfQ | +1.2 | 2.6 | e14 prophage; conserved protein (NCBI) | compare |
| b1222 | narX | +1.2 | 3.5 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b1689 | b1689 | +1.2 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1105 | ycfM | +1.1 | 1.4 | predicted outer membrane lipoprotein (NCBI) | compare |
| b2698 | recX | +1.1 | 2.0 | RecA regulator RecX (NCBI) | compare |
| b0092 | ddlB | +1.1 | 2.9 | D-alanylalanine synthetase (NCBI) | compare |
| b1236 | galU | +1.1 | 3.5 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1686 | ydiI | +1.1 | 1.5 | hypothetical protein (NCBI) | compare |
| b1104 | ycfL | +1.1 | 1.7 | hypothetical protein (NCBI) | compare |
| b2572 | rseA | +1.1 | 1.8 | anti-sigma factor (NCBI) | compare |
| b1408 | b1408 | +1.1 | 2.7 | probable enzyme (VIMSS) | compare |
| b4097 | phnK | +1.1 | 2.6 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b0101 | yacG | +1.1 | 2.2 | zinc-binding protein (NCBI) | compare |
| b1602 | pntB | +1.1 | 2.5 | pyridine nucleotide transhydrogenase (NCBI) | compare |
| b2897 | ygfY | +1.1 | 1.9 | hypothetical protein (NCBI) | compare |
| b4596 | yciZ | +1.1 | 0.7 | hypothetical protein (RefSeq) | compare |
| b1960 | vsr | +1.1 | 1.7 | DNA mismatch endonuclease of very short patch repair (NCBI) | compare |
| b3786 | rffE | +1.1 | 6.4 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1163 | ycgF | +1.1 | 3.6 | predicted FAD-binding phosphodiesterase (NCBI) | compare |
| b2123 | yehR | +1.1 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0088 | murD | +1.1 | 1.8 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b1613 | manA | +1.1 | 1.3 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3778 | rep | +1.1 | 4.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2080 | b2080 | +1.0 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b1346 | ydaQ | +1.0 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3129 | sohA | +1.0 | 1.8 | predicted regulator (NCBI) | compare |
| b1751 | ydjY | +1.0 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b4431 | rprA | +1.0 | 1.3 | Positive regulatory sRNA for RpoS translation; non-essential gene (RefSeq) | compare |
| b3787 | rffD | +1.0 | 5.2 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b2531 | iscR | +1.0 | 0.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2743 | pcm | +1.0 | 2.1 | protein-L-isoaspartate O-methyltransferase (NCBI) | compare |
| b2066 | udk | +1.0 | 2.1 | uridine/cytidine kinase (VIMSS) | compare |
| b0563 | tfaX | +1.0 | 2.9 | DLP12 prophage; predicted protein (RefSeq) | compare |
| b2356 | yfdM | +1.0 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4655 | ythA | +1.0 | 0.7 | expressed protein (RefSeq) | compare |
| b1013 | ycdC | +1.0 | 1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3071 | yqjI | +1.0 | 2.1 | predicted transcriptional regulator (NCBI) | compare |
| b0683 | fur | +1.0 | 0.9 | ferric uptake regulator (NCBI) | compare |
| b1959 | yedA | +1.0 | 2.6 | predicted inner membrane protein (NCBI) | compare |
| b3229 | sspA | +1.0 | 2.2 | stringent starvation protein A (NCBI) | compare |
| b3388 | damX | +1.0 | 6.7 | hypothetical protein (NCBI) | compare |
| b2299 | yfcD | +1.0 | 1.6 | predicted NUDIX hydrolase (NCBI) | compare |
| b2637 | yfjT | +1.0 | 1.7 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b0219 | yafV | +1.0 | 2.9 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b0728 | sucC | +0.9 | 2.9 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0520 | ylbF | +0.9 | 2.8 | hypothetical protein (NCBI) | compare |
| b2455 | eutE | +0.9 | 1.7 | predicted aldehyde dehydrogenase, ethanolamine utilization protein (NCBI) | compare |
| b1339 | abgR | +0.9 | 2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1949 | fliQ | +0.9 | 1.5 | flagellar biosynthesis protein Q (NCBI) | compare |
| b1756 | ynjD | +0.9 | 2.2 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2570 | rseC | +0.9 | 2.4 | RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) | compare |
| b2325 | yfcL | +0.9 | 1.0 | hypothetical protein (NCBI) | compare |
| b2136 | yohD | +0.9 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b1271 | yciK | +0.9 | 1.3 | short chain dehydrogenase (NCBI) | compare |
| b1383 | ydbL | +0.9 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1107 | nagZ | +0.9 | 2.2 | beta-hexosaminidase (NCBI) | compare |
| b0521 | ybcF | +0.9 | 1.7 | predicted carbamate kinase (NCBI) | compare |
| b2947 | gshB | +0.9 | 2.4 | glutathione synthetase (NCBI) | compare |
| b1806 | yeaY | +0.9 | 1.6 | predicted lipoprotein (NCBI) | compare |
| b1677 | lpp | +0.9 | 1.7 | murein lipoprotein (NCBI) | compare |
| b3150 | yraP | +0.9 | 2.8 | hypothetical protein (NCBI) | compare |
| b0596 | entA | +0.9 | 2.7 | 2,3-dihydroxybenzoate-2,3-dehydrogenase (NCBI) | compare |
| b2285 | nuoE | +0.9 | 1.6 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2259 | pmrD | +0.9 | 0.7 | polymyxin resistance protein B (VIMSS) | compare |
| b1305 | pspB | +0.9 | 1.4 | phage shock protein B (NCBI) | compare |
| b0710 | ybgI | +0.9 | 2.5 | conserved metal-binding protein (NCBI) | compare |
| b4268 | idnK | +0.9 | 2.6 | D-gluconate kinase, thermosensitive (NCBI) | compare |
| b2625 | yfjI | +0.9 | 1.6 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b0310 | ykgH | +0.9 | 1.4 | predicted inner membrane protein (NCBI) | compare |
| b1609 | rstB | +0.9 | 2.1 | sensory histidine kinase in two-component regulatory system with RstA (NCBI) | compare |
| b3785 | wzzE | +0.9 | 5.3 | putative transport protein (VIMSS) | compare |
| b2490 | b2490 | +0.9 | 0.8 | putative protein processing element (VIMSS) | compare |
| b2193 | narP | +0.9 | 1.9 | DNA-binding response regulator in two-component regulatory system with NarQ or NarX (NCBI) | compare |
| b1634 | tppB | +0.9 | 2.5 | putative tripeptide transporter permease (NCBI) | compare |
| b1454 | yncG | +0.9 | 1.6 | predicted enzyme (NCBI) | compare |
| b3614 | yibQ | +0.9 | 4.7 | orf, hypothetical protein (VIMSS) | compare |
| b4505 | insX | +0.9 | 0.7 | predicted IS protein (RefSeq) | compare |
| b2012 | yeeD | +0.9 | 0.8 | hypothetical protein (NCBI) | compare |
| b4649 | ysaD | +0.9 | 1.8 | no description | compare |
| b0955 | ycbZ | +0.9 | 3.4 | predicted peptidase (NCBI) | compare |
| b1336 | ydaH | +0.9 | 1.7 | putative pump protein (transport) (VIMSS) | compare |
| b1855 | lpxM | +0.9 | 3.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b4030 | yjbA | +0.9 | 2.3 | phosphate-starvation-inducible protein PsiE (NCBI) | compare |
| b3545 | proK | +0.9 | 1.5 | tRNA-Pro (NCBI) | compare |
| b1811 | yoaH | +0.8 | 1.5 | hypothetical protein (NCBI) | compare |
| b0220 | ivy | +0.8 | 2.2 | inhibitor of vertebrate C-lysozyme (NCBI) | compare |
| b0784 | moaD | +0.8 | 1.3 | molybdopterin synthase, small subunit (NCBI) | compare |
| b1761 | gdhA | +0.8 | 2.1 | glutamate dehydrogenase (NCBI) | compare |
| b0926 | ycbK | +0.8 | 3.6 | hypothetical protein (NCBI) | compare |
| b1989 | asnV | +0.8 | 1.3 | tRNA-Asn (NCBI) | compare |
| b0471 | ybaB | +0.8 | 1.6 | hypothetical protein (NCBI) | compare |
| b0980 | appA | +0.8 | 3.1 | phosphoanhydride phosphorylase (NCBI) | compare |
| b2768 | ygcP | +0.8 | 1.8 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b3791 | rffA | +0.8 | 3.2 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2175 | spr | +0.8 | 1.6 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1650 | nemA | +0.8 | 1.7 | N-ethylmaleimide reductase, FMN-linked (NCBI) | compare |
| b4535 | yniD | +0.8 | 0.8 | predicted protein (RefSeq) | compare |
| b4656 | yjhY | +0.8 | 1.3 | no description | compare |
| b2636 | b2636 | +0.8 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0712 | ybgK | +0.8 | 2.6 | predicted enzyme subunit (NCBI) | compare |
| b3977 | tyrU | +0.8 | 0.6 | tRNA-Tyr (NCBI) | compare |
| b2425 | cysP | +0.8 | 3.0 | thiosulfate transporter subunit (NCBI) | compare |
| b3035 | tolC | +0.8 | 3.5 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0641 | rlpB | +0.8 | 1.5 | minor lipoprotein (NCBI) | compare |
| b3203 | yhbH | +0.8 | 1.6 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b3643 | rph | +0.8 | 2.9 | ribonuclease PH (NCBI) | compare |
| b1248 | b1248 | +0.8 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1583 | ynfB | +0.8 | 1.3 | hypothetical protein (NCBI) | compare |
| b2047 | wcaJ | +0.8 | 2.1 | predicted UDP-glucose lipid carrier transferase (NCBI) | compare |
| b1390 | paaC | +0.8 | 1.8 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b2426 | ucpA | +0.8 | 1.3 | putative oxidoreductase (VIMSS) | compare |
| b2457 | cchA | +0.8 | 1.2 | detox protein (VIMSS) | compare |
| b0014 | dnaK | +0.8 | 1.1 | molecular chaperone DnaK (NCBI) | compare |
| b2832 | ygdQ | +0.8 | 2.6 | predicted inner membrane protein (NCBI) | compare |