Experiment set3S726 for Escherichia coli ECRC101

Compare to:

WM_EV219

200 most important genes:

  gene name fitness t score description  
MCAODC_20530 wcaA -6.7 -4.5 glycosyl transferase compare
MCAODC_20525 wzy -6.5 -4.5 O157 family O-antigen polymerase compare
MCAODC_06185 rfaJ -6.2 -7.4 glucosyltransferase compare
MCAODC_06195 rfaL -5.2 -8.8 O-antigen ligase RfaL compare
MCAODC_21850 ychF -5.1 -2.0 redox-regulated ATPase YchF compare
MCAODC_27055 purE -4.9 -5.2 N5-carboxyaminoimidazole ribonucleotide mutase compare
MCAODC_12290 guaB -4.9 -4.8 IMP dehydrogenase compare
MCAODC_05985 -4.8 -1.8 Aec79 compare
MCAODC_02465 -4.7 -3.0 Ribose import ATP-binding protein RbsA compare
MCAODC_20220 Asn_trna -4.7 -1.8 tRNA-Asn(gtt) compare
MCAODC_01360 apaH -4.7 -3.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
MCAODC_12295 guaA -4.6 -3.2 glutamine-hydrolyzing GMP synthase compare
MCAODC_06270 cysE -4.3 -1.7 serine O-acetyltransferase compare
MCAODC_24855 ihfB -4.3 -2.8 integration host factor subunit beta compare
MCAODC_24775 aspC -4.3 -3.5 aspartate transaminase compare
MCAODC_20475 perB -4.2 -5.0 GDP-perosamine N-acetyltransferase compare
MCAODC_12000 purL -4.2 -20.9 phosphoribosylformylglycinamidine synthase compare
MCAODC_19060 kdgA -4.2 -2.3 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
MCAODC_08450 ptsN -4.1 -2.8 PTS IIA-like nitrogen regulatory protein PtsN compare
MCAODC_06175 waaO -4.1 -5.6 lipopolysaccharide 3-alpha-galactosyltransferase compare
MCAODC_13750 cvpA -4.0 -4.4 colicin V production protein compare
MCAODC_20485 manC2 -3.9 -2.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_21670 galU -3.9 -2.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MCAODC_05085 wecA -3.8 -15.8 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
MCAODC_06955 pitA -3.8 -2.6 inorganic phosphate transporter PitA compare
MCAODC_12540 eutS -3.7 -2.0 Bacterial microcompartment shell protein EutS compare
MCAODC_20215 ycdB -3.6 -1.9 putative transcriptional regulatory protein YcdB compare
MCAODC_06190 rfaB -3.6 -5.8 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
MCAODC_06165 rfaG -3.4 -6.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MCAODC_26040 tolQ -3.4 -3.3 Tol-Pal system protein TolQ compare
MCAODC_06170 rfaP -3.3 -5.1 lipopolysaccharide core heptose(I) kinase RfaP compare
MCAODC_23890 fabG -3.3 -2.1 oxidoreductase compare
MCAODC_03810 purH -3.3 -12.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
MCAODC_03815 purD -3.3 -9.9 Phosphoribosylamine--glycine ligase compare
MCAODC_09980 serA -3.2 -9.7 phosphoglycerate dehydrogenase compare
MCAODC_13755 purF -3.1 -10.5 amidophosphoribosyltransferase compare
MCAODC_20540 -3.1 -11.1 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
MCAODC_24880 serC -3.1 -8.1 3-phosphoserine/phosphohydroxythreonine transaminase compare
MCAODC_27060 purK -3.1 -6.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
MCAODC_12340 purM -3.1 -6.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MCAODC_01715 serB -3.1 -6.3 phosphoserine phosphatase compare
MCAODC_12460 purC -3.0 -6.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
MCAODC_00860 dksA -2.9 -6.9 RNA polymerase-binding protein DksA compare
MCAODC_18095 -2.9 -2.1 Putative oxidoreductase Fe-S subunit compare
MCAODC_02550 cysQ -2.8 -6.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MCAODC_21675 rssB -2.8 -4.2 two-component system response regulator RssB compare
MCAODC_26030 tolA -2.7 -3.1 cell envelope integrity protein TolA compare
MCAODC_12335 purN -2.6 -9.4 phosphoribosylglycinamide formyltransferase compare
MCAODC_20480 cpsG -2.6 -2.0 colanic acid biosynthesis phosphomannomutase CpsG compare
MCAODC_13950 elaD -2.6 -1.8 ElaD/SseL family deubiquitinase compare
MCAODC_00995 acnB -2.5 -1.7 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_04600 glnA -2.5 -4.1 glutamate--ammonia ligase compare
MCAODC_02745 purA -2.4 -1.8 adenylosuccinate synthase compare
MCAODC_27545 -2.4 -6.0 Lon protease compare
MCAODC_21515 -2.3 -1.3 transcriptional regulator compare
MCAODC_00045 rusA -2.3 -1.8 crossover junction endodeoxyribonuclease RusA compare
MCAODC_11635 espM2 -2.3 -1.5 T3SS effector guanine nucleotide exchange factor EspM2 compare
MCAODC_08475 lptC -2.2 -2.1 LPS export ABC transporter periplasmic protein LptC compare
MCAODC_15635 rluB -2.2 -3.2 23S rRNA pseudouridine(2605) synthase RluB compare
MCAODC_12720 ptsI -2.1 -2.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_24965 lrp -2.1 -5.8 leucine-responsive transcriptional regulator Lrp compare
MCAODC_23300 -2.1 -2.0 chemotaxis protein compare
MCAODC_16435 yncG -2.1 -1.7 Uncharacterized GST-like protein YncG compare
MCAODC_27555 clpX -2.1 -2.4 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_22980 rne -2.0 -3.2 ribonuclease E compare
MCAODC_10975 cysC -2.0 -7.2 Adenylyl-sulfate kinase compare
MCAODC_10085 fldB -2.0 -3.3 flavodoxin FldB compare
MCAODC_05955 escG -2.0 -1.3 type III secretion system LEE needle protein cochaperone EscG compare
MCAODC_13180 cIII -2.0 -1.3 Protease inhibitor III compare
MCAODC_15435 sopA -2.0 -1.9 plasmid-partitioning protein SopA compare
MCAODC_12270 bamB -2.0 -4.5 outer membrane protein assembly factor BamB compare
MCAODC_19980 -2.0 -1.3 PerC family transcriptional regulator compare
MCAODC_10895 cysJ -2.0 -8.9 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit compare
MCAODC_19800 yedJ -1.9 -2.3 phosphohydrolase compare
MCAODC_24430 -1.9 -2.0 Endodeoxyribonuclease RusA compare
MCAODC_18900 mntP -1.9 -2.5 manganese efflux pump MntP compare
MCAODC_03575 plsB -1.9 -1.2 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
MCAODC_05945 cesD2 -1.9 -2.9 LcrR family type III secretion system chaperone CesD2 compare
MCAODC_09775 yggS -1.8 -5.4 pyridoxal phosphate homeostasis protein compare
MCAODC_01350 rsmA -1.8 -2.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
MCAODC_13385 -1.8 -1.8 DUF826 domain-containing protein compare
MCAODC_18220 ydiF -1.8 -2.5 Acetate CoA-transferase YdiF compare
MCAODC_19155 nudB -1.8 -2.0 dihydroneopterin triphosphate diphosphatase compare
MCAODC_10905 cysH -1.8 -4.3 phosphoadenosine phosphosulfate reductase compare
MCAODC_07520 -1.8 -3.7 NfuA family Fe-S biogenesis protein compare
MCAODC_26020 pal -1.8 -2.5 peptidoglycan-associated lipoprotein Pal compare
MCAODC_10780 mazE -1.7 -1.4 type II toxin-antitoxin system antitoxin MazE compare
MCAODC_04330 pfkA -1.7 -1.4 6-phosphofructokinase compare
MCAODC_20835 -1.7 -2.0 tail fiber assembly protein compare
MCAODC_08660 pnp -1.7 -4.4 polyribonucleotide nucleotidyltransferase compare
MCAODC_17125 -1.7 -1.8 hypothetical protein compare
MCAODC_22415 -1.7 -4.7 DNA primase compare
MCAODC_23610 -1.7 -1.5 Transposase compare
MCAODC_08625 nusA -1.7 -1.3 Transcription termination/antitermination protein NusA compare
MCAODC_05995 -1.6 -0.9 toxin compare
MCAODC_04590 typA -1.6 -7.1 ribosome-dependent GTPase TypA compare
MCAODC_13410 -1.6 -3.1 lysis protein compare
MCAODC_26805 fepD -1.6 -4.2 ferrienterobactin ABC transporter permease compare
MCAODC_26815 fepC -1.5 -2.2 ferrienterobactin ABC transporter ATPase compare
MCAODC_19430 -1.5 -2.5 hypothetical protein compare
MCAODC_11230 recA -1.5 -1.5 recombinase RecA compare
MCAODC_27560 clpP -1.5 -1.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
MCAODC_11555 -1.5 -1.3 hypothetical protein compare
MCAODC_15150 repA2 -1.5 -7.4 Replication regulatory protein repA2 compare
MCAODC_13395 -1.5 -1.3 SAR-endolysin compare
MCAODC_26145 sucA -1.5 -1.9 2-oxoglutarate dehydrogenase E1 component compare
MCAODC_21330 -1.5 -1.2 phage tail protein compare
MCAODC_14980 -1.5 -1.1 SAR-endolysin compare
MCAODC_09850 cmtB -1.4 -1.3 PTS mannitol transporter subunit IIA compare
MCAODC_26025 tolB -1.4 -4.3 Tol-Pal system protein TolB compare
MCAODC_16135 hslJ -1.4 -1.7 heat shock protein HslJ compare
MCAODC_24585 yccU -1.4 -2.7 Uncharacterized protein YccU compare
MCAODC_15450 -1.4 -3.1 hypothetical protein compare
MCAODC_20335 yeeT -1.4 -1.4 Uncharacterized protein YeeT compare
MCAODC_26380 nagA -1.4 -5.0 N-acetylglucosamine-6-phosphate deacetylase compare
MCAODC_14790 -1.4 -1.2 DUF1382 domain-containing protein compare
MCAODC_11890 srmB -1.4 -3.9 ATP-dependent RNA helicase SrmB compare
MCAODC_01340 surA -1.4 -3.0 peptidylprolyl isomerase SurA compare
MCAODC_07005 hicB -1.4 -3.5 toxin-antitoxin system HicB family antitoxin compare
MCAODC_07150 acpP -1.4 -1.2 acyl carrier protein compare
MCAODC_25955 gpmA -1.4 -2.4 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
MCAODC_16705 ydeR -1.3 -1.5 Uncharacterized fimbrial-like protein YdeR compare
MCAODC_15170 putA1 -1.3 -2.4 CopG family transcriptional regulator compare
MCAODC_12455 -1.3 -0.9 hypothetical protein compare
MCAODC_06065 spoT -1.3 -1.4 bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
MCAODC_26260 -1.3 -1.3 Uncharacterized protein YbfC compare
MCAODC_19425 -1.3 -2.5 Phage protein compare
MCAODC_26810 fepG -1.3 -3.2 iron-enterobactin ABC transporter permease compare
MCAODC_04940 yifL -1.3 -2.2 Uncharacterized lipoprotein YifL compare
MCAODC_21900 dsbB -1.3 -1.6 disulfide bond formation protein DsbB compare
MCAODC_11910 rseA -1.3 -2.5 anti-sigma-E factor RseA compare
MCAODC_22960 yceD -1.3 -2.2 23S rRNA accumulation protein YceD compare
MCAODC_08310 argR -1.2 -3.5 transcriptional regulator ArgR compare
MCAODC_10075 sdhE -1.2 -1.3 FAD assembly factor SdhE compare
MCAODC_26375 nagB -1.2 -4.7 glucosamine-6-phosphate deaminase compare
MCAODC_04605 glnL -1.2 -4.1 nitrogen regulation protein NR(II) compare
MCAODC_28035 lacI -1.2 -3.7 DNA-binding transcriptional repressor LacI compare
MCAODC_19995 -1.2 -2.2 hypothetical protein compare
MCAODC_16310 tehA -1.2 -4.2 dicarboxylate transporter/tellurite-resistance protein TehA compare
MCAODC_10900 cysI -1.2 -4.5 assimilatory sulfite reductase (NADPH) hemoprotein subunit compare
MCAODC_10430 yqeH -1.2 -1.7 Uncharacterized protein YqeH compare
MCAODC_11930 lepA -1.2 -1.7 translation elongation factor 4 compare
MCAODC_05125 ppiC -1.2 -1.4 peptidylprolyl isomerase PpiC compare
MCAODC_05280 asnC -1.2 -7.0 transcriptional regulator AsnC compare
MCAODC_07645 aroB -1.2 -4.2 3-dehydroquinate synthase compare
MCAODC_17955 sodC -1.2 -1.1 superoxide dismutase [Cu-Zn] SodC compare
MCAODC_18560 nudG -1.2 -2.6 CTP pyrophosphohydrolase compare
MCAODC_24420 ydiL -1.1 -1.4 CPBP family intramembrane metalloprotease compare
MCAODC_08900 yhaB -1.1 -1.0 Uncharacterized protein YhaB compare
MCAODC_17795 uidA -1.1 -1.9 beta-glucuronidase compare
MCAODC_24750 ssuB -1.1 -2.5 aliphatic sulfonates ABC transporter ATP-binding protein compare
MCAODC_23535 terW -1.1 -0.5 tellurium resistance protein TerW compare
MCAODC_07710 cysG -1.1 -5.1 siroheme synthase CysG compare
MCAODC_23910 -1.1 -1.2 GGDEF domain-containing protein compare
MCAODC_17235 -1.1 -1.1 site-specific integrase compare
MCAODC_05400 pstB -1.1 -0.9 phosphate ABC transporter ATP-binding protein PstB compare
MCAODC_23325 -1.1 -1.0 IS66 transposase compare
MCAODC_01620 thrB -1.1 -4.8 homoserine kinase compare
MCAODC_11660 rnfH -1.1 -2.1 RnfH family protein compare
MCAODC_17855 rsxA -1.1 -1.1 electron transport complex subunit RsxA compare
MCAODC_08085 aroE -1.1 -4.8 shikimate dehydrogenase compare
MCAODC_17770 manA -1.1 -2.0 mannose-6-phosphate isomerase compare
MCAODC_10330 flhB -1.1 -0.7 EscU/YscU/HrcU family type III secretion system export apparatus switch protein compare
MCAODC_03845 hupA -1.1 -2.2 DNA-binding protein HU-alpha compare
MCAODC_18670 yeaC -1.1 -1.2 Uncharacterized protein YeaC compare
MCAODC_15980 -1.1 -1.5 Murein peptide amidase A compare
MCAODC_17615 ynfB -1.1 -1.7 DUF1283 domain-containing protein compare
MCAODC_21650 ychT -1.1 -1.7 Protein YchT compare
MCAODC_18945 proQ -1.1 -1.4 RNA chaperone ProQ compare
MCAODC_19890 -1.1 -1.0 Phage-related protein, tail protein J compare
MCAODC_09425 ftsP -1.0 -1.5 cell division protein FtsP compare
MCAODC_24365 -1.0 -1.3 lysis protein compare
MCAODC_23660 opgE -1.0 -1.0 phosphoethanolamine transferase compare
MCAODC_14670 yohP -1.0 -1.6 protein YohP compare
MCAODC_22410 -1.0 -1.3 hypothetical protein compare
MCAODC_26715 uspG -1.0 -1.8 universal stress protein UspG compare
MCAODC_17495 -1.0 -1.5 DUF551 domain-containing protein compare
MCAODC_20945 -1.0 -1.3 DUF676 domain-containing protein compare
MCAODC_17610 ynfA -1.0 -1.8 YnfA family protein compare
MCAODC_10375 ygeK -1.0 -1.5 Uncharacterized response regulatory protein YgeK compare
MCAODC_23480 terD -1.0 -1.0 tellurium resistance membrane protein TerD compare
MCAODC_12315 -1.0 -1.7 hypothetical protein compare
MCAODC_02110 fimC -1.0 -2.6 type 1 fimbria chaperone FimC compare
MCAODC_15625 yciO -1.0 -2.0 L-threonylcarbamoyladenylate synthase compare
MCAODC_00460 -1.0 -2.2 hypothetical protein compare
MCAODC_00350 -1.0 -0.9 Ankyrin repeat containing virulence factor compare
MCAODC_16930 ydfJ -1.0 -2.3 Putative transporter YdfJ compare
MCAODC_09835 speB -1.0 -3.4 agmatinase compare
MCAODC_22765 -1.0 -0.8 DUF1391 domain-containing protein compare
MCAODC_24145 etp -1.0 -2.7 protein-tyrosine-phosphatase Etp compare
MCAODC_23355 spo0J -1.0 -1.6 transcriptional regulator compare
MCAODC_24125 gfcB -1.0 -2.3 Uncharacterized lipoprotein GfcB compare
MCAODC_02315 holC -0.9 -1.8 DNA polymerase III subunit chi compare
MCAODC_22805 nagK -0.9 -1.6 N-acetylglucosamine kinase compare
MCAODC_11750 tyrA -0.9 -6.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
MCAODC_23160 mdoG -0.9 -2.5 glucans biosynthesis protein MdoG compare
MCAODC_25120 -0.9 -1.1 hypothetical protein compare
MCAODC_04915 uvrD -0.9 -3.6 DNA helicase II compare
MCAODC_00680 skp -0.9 -1.4 molecular chaperone Skp compare
MCAODC_14885 ybcK -0.9 -1.0 Uncharacterized protein YbcK compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECRC101 in phage experiments

For phage Phage across organisms